RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
ATN1-202ENST00000396684 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.369e-9■■■■■ 40.3
ATN1-202ENST00000396684 ZNF777Q9ULD5 760 aaPredicted RBP17.28■□□□□ 0.36
ATN1-202ENST00000396684 FHOD3Q2V2M9 1422 aa17.28■□□□□ 0.36
ATN1-202ENST00000396684 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
ATN1-202ENST00000396684 ABCA10Q8WWZ4 1543 aa17.28■□□□□ 0.36
ATN1-202ENST00000396684 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
ATN1-202ENST00000396684 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
ATN1-202ENST00000396684 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
ATN1-202ENST00000396684 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
ATN1-202ENST00000396684 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
ATN1-202ENST00000396684 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
ATN1-202ENST00000396684 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
ATN1-202ENST00000396684 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
ATN1-202ENST00000396684 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
ATN1-202ENST00000396684 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
ATN1-202ENST00000396684 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
ATN1-202ENST00000396684 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
ATN1-202ENST00000396684 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATN1-202ENST00000396684 DIEXFQ68CQ4 756 aaKnown RBP17.09■□□□□ 0.33
ATN1-202ENST00000396684 CUL7Q14999 1698 aa17.09■□□□□ 0.33
ATN1-202ENST00000396684 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
ATN1-202ENST00000396684 CFDP1Q9UEE9 299 aaPredicted RBP17.07■□□□□ 0.32
ATN1-202ENST00000396684 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
ATN1-202ENST00000396684 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
ATN1-202ENST00000396684 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
ATN1-202ENST00000396684 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
ATN1-202ENST00000396684 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
ATN1-202ENST00000396684 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
ATN1-202ENST00000396684 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
ATN1-202ENST00000396684 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
ATN1-202ENST00000396684 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
ATN1-202ENST00000396684 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
ATN1-202ENST00000396684 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
ATN1-202ENST00000396684 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
ATN1-202ENST00000396684 FYCO1Q9BQS8 1478 aa16.96■□□□□ 0.31
ATN1-202ENST00000396684 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
ATN1-202ENST00000396684 LRRC9Q6ZRR7 1453 aa16.95■□□□□ 0.3
ATN1-202ENST00000396684 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
ATN1-202ENST00000396684 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
ATN1-202ENST00000396684 PTPRGP23470 1445 aa16.92■□□□□ 0.3
ATN1-202ENST00000396684 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
ATN1-202ENST00000396684 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
ATN1-202ENST00000396684 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
ATN1-202ENST00000396684 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
ATN1-202ENST00000396684 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
ATN1-202ENST00000396684 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
ATN1-202ENST00000396684 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
ATN1-202ENST00000396684 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
ATN1-202ENST00000396684 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
ATN1-202ENST00000396684 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
ATN1-202ENST00000396684 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
ATN1-202ENST00000396684 PHLDB1Q86UU1 1377 aa16.86■□□□□ 0.29
ATN1-202ENST00000396684 WDR62O43379 1518 aa16.86■□□□□ 0.29
ATN1-202ENST00000396684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.298e-9■■□□□ 11.8
ATN1-202ENST00000396684 PCF11O94913 1555 aaKnown RBP16.82■□□□□ 0.28
ATN1-202ENST00000396684 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
ATN1-202ENST00000396684 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
ATN1-202ENST00000396684 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
ATN1-202ENST00000396684 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
ATN1-202ENST00000396684 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
ATN1-202ENST00000396684 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
ATN1-202ENST00000396684 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
ATN1-202ENST00000396684 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
ATN1-202ENST00000396684 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
ATN1-202ENST00000396684 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
ATN1-202ENST00000396684 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.27
ATN1-202ENST00000396684 MAP3K1Q13233 1512 aa16.77■□□□□ 0.27
ATN1-202ENST00000396684 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
ATN1-202ENST00000396684 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
ATN1-202ENST00000396684 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
ATN1-202ENST00000396684 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
ATN1-202ENST00000396684 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
ATN1-202ENST00000396684 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
ATN1-202ENST00000396684 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.27
ATN1-202ENST00000396684 CNGB1Q14028 1251 aaPredicted RBP16.7■□□□□ 0.26
ATN1-202ENST00000396684 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
ATN1-202ENST00000396684 TIMELESSQ9UNS1 1208 aa16.68■□□□□ 0.26
ATN1-202ENST00000396684 ANP32CO43423 234 aa16.68■□□□□ 0.26
ATN1-202ENST00000396684 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
ATN1-202ENST00000396684 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATN1-202ENST00000396684 RSPH4AQ5TD94 716 aa16.66■□□□□ 0.26
ATN1-202ENST00000396684 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
ATN1-202ENST00000396684 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
ATN1-202ENST00000396684 SUPT6HQ7KZ85 1726 aaKnown RBP16.65■□□□□ 0.26
ATN1-202ENST00000396684 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
ATN1-202ENST00000396684 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
ATN1-202ENST00000396684 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
ATN1-202ENST00000396684 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
ATN1-202ENST00000396684 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
ATN1-202ENST00000396684 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
ATN1-202ENST00000396684 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
ATN1-202ENST00000396684 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
ATN1-202ENST00000396684 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
ATN1-202ENST00000396684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.253e-9■■■□□ 15.1
ATN1-202ENST00000396684 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
ATN1-202ENST00000396684 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
ATN1-202ENST00000396684 FOXD1Q16676 465 aa16.59■□□□□ 0.25
ATN1-202ENST00000396684 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.25
ATN1-202ENST00000396684 UACAQ9BZF9 1416 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms