RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
ATN1-202ENST00000396684 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
ATN1-202ENST00000396684 SHROOM4Q9ULL8 1493 aa21.1■□□□□ 0.97
ATN1-202ENST00000396684 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
ATN1-202ENST00000396684 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
ATN1-202ENST00000396684 ABCC9O60706 1549 aa20.37■□□□□ 0.85
ATN1-202ENST00000396684 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
ATN1-202ENST00000396684 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
ATN1-202ENST00000396684 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
ATN1-202ENST00000396684 NACADO15069 1562 aa19.64■□□□□ 0.73
ATN1-202ENST00000396684 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
ATN1-202ENST00000396684 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.73
ATN1-202ENST00000396684 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
ATN1-202ENST00000396684 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
ATN1-202ENST00000396684 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
ATN1-202ENST00000396684 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
ATN1-202ENST00000396684 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
ATN1-202ENST00000396684 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
ATN1-202ENST00000396684 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
ATN1-202ENST00000396684 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
ATN1-202ENST00000396684 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.61
ATN1-202ENST00000396684 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.6
ATN1-202ENST00000396684 UBTFP17480 764 aaKnown RBP18.78■□□□□ 0.6
ATN1-202ENST00000396684 APLP2Q06481 763 aa18.68■□□□□ 0.58
ATN1-202ENST00000396684 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
ATN1-202ENST00000396684 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
ATN1-202ENST00000396684 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
ATN1-202ENST00000396684 WIZO95785 1651 aa18.62■□□□□ 0.57
ATN1-202ENST00000396684 SMARCA4P51532 1647 aa18.58■□□□□ 0.56
ATN1-202ENST00000396684 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
ATN1-202ENST00000396684 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
ATN1-202ENST00000396684 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
ATN1-202ENST00000396684 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
ATN1-202ENST00000396684 ATAD2BQ9ULI0 1458 aa18.42■□□□□ 0.54
ATN1-202ENST00000396684 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
ATN1-202ENST00000396684 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
ATN1-202ENST00000396684 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
ATN1-202ENST00000396684 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
ATN1-202ENST00000396684 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.535e-6■■■■■ 29.2
ATN1-202ENST00000396684 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
ATN1-202ENST00000396684 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
ATN1-202ENST00000396684 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
ATN1-202ENST00000396684 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
ATN1-202ENST00000396684 EEA1Q15075 1411 aa18.19■□□□□ 0.5
ATN1-202ENST00000396684 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
ATN1-202ENST00000396684 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
ATN1-202ENST00000396684 SOGA1O94964 1423 aa18.04■□□□□ 0.48
ATN1-202ENST00000396684 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
ATN1-202ENST00000396684 ZEB1P37275 1124 aaPredicted RBP18.03■□□□□ 0.48
ATN1-202ENST00000396684 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
ATN1-202ENST00000396684 KIF27Q86VH2 1401 aa18■□□□□ 0.47
ATN1-202ENST00000396684 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
ATN1-202ENST00000396684 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
ATN1-202ENST00000396684 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
ATN1-202ENST00000396684 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
ATN1-202ENST00000396684 TNIKQ9UKE5 1360 aa17.92■□□□□ 0.46
ATN1-202ENST00000396684 HRCP23327 699 aa17.91■□□□□ 0.46
ATN1-202ENST00000396684 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
ATN1-202ENST00000396684 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
ATN1-202ENST00000396684 FBLN2P98095 1184 aa17.88■□□□□ 0.45
ATN1-202ENST00000396684 CLIP1P30622 1438 aa17.88■□□□□ 0.45
ATN1-202ENST00000396684 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
ATN1-202ENST00000396684 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
ATN1-202ENST00000396684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
ATN1-202ENST00000396684 CUX2O14529 1486 aa17.86■□□□□ 0.45
ATN1-202ENST00000396684 ITGAEP38570 1179 aa17.83■□□□□ 0.44
ATN1-202ENST00000396684 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
ATN1-202ENST00000396684 CFTRP13569 1480 aa17.81■□□□□ 0.44
ATN1-202ENST00000396684 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
ATN1-202ENST00000396684 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
ATN1-202ENST00000396684 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
ATN1-202ENST00000396684 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
ATN1-202ENST00000396684 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
ATN1-202ENST00000396684 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
ATN1-202ENST00000396684 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
ATN1-202ENST00000396684 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
ATN1-202ENST00000396684 NESP48681 1621 aa17.63■□□□□ 0.41
ATN1-202ENST00000396684 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
ATN1-202ENST00000396684 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
ATN1-202ENST00000396684 ARID3CA6NKF2 412 aa17.57■□□□□ 0.4
ATN1-202ENST00000396684 CUX1P39880 1505 aa17.57■□□□□ 0.4
ATN1-202ENST00000396684 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
ATN1-202ENST00000396684 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
ATN1-202ENST00000396684 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
ATN1-202ENST00000396684 IGF1RP08069 1367 aa17.49■□□□□ 0.39
ATN1-202ENST00000396684 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
ATN1-202ENST00000396684 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
ATN1-202ENST00000396684 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
ATN1-202ENST00000396684 KIF21BO75037 1637 aa17.45■□□□□ 0.38
ATN1-202ENST00000396684 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
ATN1-202ENST00000396684 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
ATN1-202ENST00000396684 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
ATN1-202ENST00000396684 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
ATN1-202ENST00000396684 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
ATN1-202ENST00000396684 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
ATN1-202ENST00000396684 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
ATN1-202ENST00000396684 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
ATN1-202ENST00000396684 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
ATN1-202ENST00000396684 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
ATN1-202ENST00000396684 TRIM52Q96A61 297 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms