RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
MKL1-202ENST00000396617 SIN3AQ96ST3 1273 aa19.59■□□□□ 0.73
MKL1-202ENST00000396617 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.73
MKL1-202ENST00000396617 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
MKL1-202ENST00000396617 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
MKL1-202ENST00000396617 DAXXQ9UER7 740 aaPredicted RBP19.56■□□□□ 0.72
MKL1-202ENST00000396617 FKBP8Q14318 412 aa19.56■□□□□ 0.72
MKL1-202ENST00000396617 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
MKL1-202ENST00000396617 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
MKL1-202ENST00000396617 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
MKL1-202ENST00000396617 SETD5Q9C0A6 1442 aa19.52■□□□□ 0.72
MKL1-202ENST00000396617 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.72
MKL1-202ENST00000396617 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
MKL1-202ENST00000396617 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
MKL1-202ENST00000396617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.716e-6■□□□□ 8.3
MKL1-202ENST00000396617 TIMELESSQ9UNS1 1208 aa19.49■□□□□ 0.71
MKL1-202ENST00000396617 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
MKL1-202ENST00000396617 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
MKL1-202ENST00000396617 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
MKL1-202ENST00000396617 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
MKL1-202ENST00000396617 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
MKL1-202ENST00000396617 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
MKL1-202ENST00000396617 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
MKL1-202ENST00000396617 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
MKL1-202ENST00000396617 IGF1RP08069 1367 aa19.39■□□□□ 0.69
MKL1-202ENST00000396617 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
MKL1-202ENST00000396617 TMC1Q8TDI8 760 aa19.39■□□□□ 0.69
MKL1-202ENST00000396617 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
MKL1-202ENST00000396617 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
MKL1-202ENST00000396617 KIF21BO75037 1637 aa19.35■□□□□ 0.69
MKL1-202ENST00000396617 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
MKL1-202ENST00000396617 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
MKL1-202ENST00000396617 CFTRP13569 1480 aa19.3■□□□□ 0.68
MKL1-202ENST00000396617 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
MKL1-202ENST00000396617 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
MKL1-202ENST00000396617 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
MKL1-202ENST00000396617 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
MKL1-202ENST00000396617 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
MKL1-202ENST00000396617 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
MKL1-202ENST00000396617 CARMIL2Q6F5E8 1435 aa19.23■□□□□ 0.67
MKL1-202ENST00000396617 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
MKL1-202ENST00000396617 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
MKL1-202ENST00000396617 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
MKL1-202ENST00000396617 CARD11Q9BXL7 1154 aa19.22■□□□□ 0.67
MKL1-202ENST00000396617 CANXP27824 592 aaKnown RBP19.21■□□□□ 0.67
MKL1-202ENST00000396617 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
MKL1-202ENST00000396617 IRX6P78412 446 aaPredicted RBP19.18■□□□□ 0.66
MKL1-202ENST00000396617 MPHOSPH9Q99550 1183 aa19.17■□□□□ 0.66
MKL1-202ENST00000396617 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
MKL1-202ENST00000396617 CCER2I3L3R5 266 aa19.16■□□□□ 0.66
MKL1-202ENST00000396617 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
MKL1-202ENST00000396617 NEFMP07197 916 aa19.15■□□□□ 0.66
MKL1-202ENST00000396617 FOXD1Q16676 465 aa19.14■□□□□ 0.66
MKL1-202ENST00000396617 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.66
MKL1-202ENST00000396617 CUX1P39880 1505 aa19.14■□□□□ 0.66
MKL1-202ENST00000396617 HSPA5P11021 654 aaKnown RBP19.14■□□□□ 0.65
MKL1-202ENST00000396617 ANP32AP39687 249 aaKnown RBP19.13■□□□□ 0.65
MKL1-202ENST00000396617 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
MKL1-202ENST00000396617 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
MKL1-202ENST00000396617 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
MKL1-202ENST00000396617 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
MKL1-202ENST00000396617 PEG3Q9GZU2 1588 aa19.11■□□□□ 0.65
MKL1-202ENST00000396617 PKD2Q13563 968 aa19.1■□□□□ 0.65
MKL1-202ENST00000396617 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
MKL1-202ENST00000396617 LRRC9Q6ZRR7 1453 aa19.08■□□□□ 0.64
MKL1-202ENST00000396617 DCAF11Q8TEB1 546 aa19.07■□□□□ 0.64
MKL1-202ENST00000396617 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
MKL1-202ENST00000396617 PHLDB1Q86UU1 1377 aa19.07■□□□□ 0.64
MKL1-202ENST00000396617 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
MKL1-202ENST00000396617 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
MKL1-202ENST00000396617 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
MKL1-202ENST00000396617 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
MKL1-202ENST00000396617 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.64
MKL1-202ENST00000396617 NUP155O75694 1391 aa19.01■□□□□ 0.63
MKL1-202ENST00000396617 FGD6Q6ZV73 1430 aa19.01■□□□□ 0.63
MKL1-202ENST00000396617 CASKIN1Q8WXD9 1431 aa19.01■□□□□ 0.63
MKL1-202ENST00000396617 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
MKL1-202ENST00000396617 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
MKL1-202ENST00000396617 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
MKL1-202ENST00000396617 NESP48681 1621 aa19■□□□□ 0.63
MKL1-202ENST00000396617 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
MKL1-202ENST00000396617 ZBTB47Q9UFB7 747 aaPredicted RBP18.98■□□□□ 0.63
MKL1-202ENST00000396617 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
MKL1-202ENST00000396617 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
MKL1-202ENST00000396617 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
MKL1-202ENST00000396617 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
MKL1-202ENST00000396617 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.624e-6■□□□□ 10.8
MKL1-202ENST00000396617 FYCO1Q9BQS8 1478 aa18.94■□□□□ 0.62
MKL1-202ENST00000396617 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.624e-7■■■■□ 22.9
MKL1-202ENST00000396617 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
MKL1-202ENST00000396617 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
MKL1-202ENST00000396617 TMF1P82094 1093 aa18.9■□□□□ 0.62
MKL1-202ENST00000396617 PPP4R2Q9NY27 417 aa18.9■□□□□ 0.62
MKL1-202ENST00000396617 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
MKL1-202ENST00000396617 KANK1Q14678 1352 aa18.88■□□□□ 0.61
MKL1-202ENST00000396617 NCOA2Q15596 1464 aa18.88■□□□□ 0.61
MKL1-202ENST00000396617 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
MKL1-202ENST00000396617 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
MKL1-202ENST00000396617 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
MKL1-202ENST00000396617 CC2D1BQ5T0F9 858 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms