RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
SNX6-202ENST00000396526 MAP3K1Q13233 1512 aa24.16■■□□□ 1.46
SNX6-202ENST00000396526 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
SNX6-202ENST00000396526 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
SNX6-202ENST00000396526 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
SNX6-202ENST00000396526 FMN1Q68DA7 1419 aa24.11■■□□□ 1.45
SNX6-202ENST00000396526 CTTNBP2Q8WZ74 1663 aa24.1■■□□□ 1.45
SNX6-202ENST00000396526 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
SNX6-202ENST00000396526 GRIN2BQ13224 1484 aa24.08■■□□□ 1.44
SNX6-202ENST00000396526 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.441e-6■■■■■ 27.8
SNX6-202ENST00000396526 TIAM1Q13009 1591 aa24.06■■□□□ 1.44
SNX6-202ENST00000396526 RRBP1Q9P2E9 1410 aaKnown RBP24.05■■□□□ 1.44
SNX6-202ENST00000396526 WDR62O43379 1518 aa24.05■■□□□ 1.44
SNX6-202ENST00000396526 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
SNX6-202ENST00000396526 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
SNX6-202ENST00000396526 FYCO1Q9BQS8 1478 aa24.03■■□□□ 1.44
SNX6-202ENST00000396526 LRRC9Q6ZRR7 1453 aa24.01■■□□□ 1.43
SNX6-202ENST00000396526 PCF11O94913 1555 aaKnown RBP23.96■■□□□ 1.43
SNX6-202ENST00000396526 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
SNX6-202ENST00000396526 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
SNX6-202ENST00000396526 ITGAEP38570 1179 aa23.91■■□□□ 1.42
SNX6-202ENST00000396526 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
SNX6-202ENST00000396526 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
SNX6-202ENST00000396526 SAMD9Q5K651 1589 aa23.89■■□□□ 1.41
SNX6-202ENST00000396526 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
SNX6-202ENST00000396526 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
SNX6-202ENST00000396526 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
SNX6-202ENST00000396526 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
SNX6-202ENST00000396526 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
SNX6-202ENST00000396526 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
SNX6-202ENST00000396526 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
SNX6-202ENST00000396526 KIAA0586Q9BVV6 1533 aa23.78■■□□□ 1.4
SNX6-202ENST00000396526 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
SNX6-202ENST00000396526 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
SNX6-202ENST00000396526 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
SNX6-202ENST00000396526 FBLN2P98095 1184 aa23.75■■□□□ 1.39
SNX6-202ENST00000396526 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
SNX6-202ENST00000396526 CCDC18Q5T9S5 1454 aa23.74■■□□□ 1.39
SNX6-202ENST00000396526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
SNX6-202ENST00000396526 UGGT2Q9NYU1 1516 aa23.72■■□□□ 1.39
SNX6-202ENST00000396526 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
SNX6-202ENST00000396526 SYNJ2O15056 1496 aa23.69■■□□□ 1.38
SNX6-202ENST00000396526 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
SNX6-202ENST00000396526 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
SNX6-202ENST00000396526 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
SNX6-202ENST00000396526 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
SNX6-202ENST00000396526 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
SNX6-202ENST00000396526 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
SNX6-202ENST00000396526 CDK11AQ9UQ88 783 aaPredicted RBP23.64■■□□□ 1.38
SNX6-202ENST00000396526 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
SNX6-202ENST00000396526 NCOA2Q15596 1464 aa23.61■■□□□ 1.37
SNX6-202ENST00000396526 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
SNX6-202ENST00000396526 MYOM3Q5VTT5 1437 aa23.6■■□□□ 1.37
SNX6-202ENST00000396526 SUPT6HQ7KZ85 1726 aaKnown RBP23.59■■□□□ 1.37
SNX6-202ENST00000396526 EPRSP07814 1512 aaKnown RBP23.58■■□□□ 1.37
SNX6-202ENST00000396526 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
SNX6-202ENST00000396526 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
SNX6-202ENST00000396526 DISP1Q96F81 1524 aa23.54■■□□□ 1.36
SNX6-202ENST00000396526 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
SNX6-202ENST00000396526 NUP160Q12769 1436 aa23.51■■□□□ 1.35
SNX6-202ENST00000396526 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
SNX6-202ENST00000396526 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
SNX6-202ENST00000396526 CDK13Q14004 1512 aaKnown RBP23.45■■□□□ 1.34
SNX6-202ENST00000396526 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
SNX6-202ENST00000396526 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
SNX6-202ENST00000396526 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
SNX6-202ENST00000396526 MAGI3Q5TCQ9 1506 aa23.4■■□□□ 1.34
SNX6-202ENST00000396526 PTPN23Q9H3S7 1636 aa23.39■■□□□ 1.33
SNX6-202ENST00000396526 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.33
SNX6-202ENST00000396526 HFM1A2PYH4 1435 aa23.39■■□□□ 1.33
SNX6-202ENST00000396526 TIMELESSQ9UNS1 1208 aa23.38■■□□□ 1.33
SNX6-202ENST00000396526 ACIN1Q9UKV3 1341 aaKnown RBP23.37■■□□□ 1.33
SNX6-202ENST00000396526 TCOF1Q13428 1488 aaKnown RBP23.35■■□□□ 1.33
SNX6-202ENST00000396526 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.33
SNX6-202ENST00000396526 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
SNX6-202ENST00000396526 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
SNX6-202ENST00000396526 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
SNX6-202ENST00000396526 PTPRKQ15262 1439 aa23.3■■□□□ 1.32
SNX6-202ENST00000396526 CHIC2Q9UKJ5 165 aa23.3■■□□□ 1.32
SNX6-202ENST00000396526 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
SNX6-202ENST00000396526 NAIPQ13075 1403 aa23.29■■□□□ 1.32
SNX6-202ENST00000396526 UACAQ9BZF9 1416 aa23.29■■□□□ 1.32
SNX6-202ENST00000396526 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
SNX6-202ENST00000396526 PRG4Q92954 1404 aaPredicted RBP23.27■■□□□ 1.32
SNX6-202ENST00000396526 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
SNX6-202ENST00000396526 PTPRGP23470 1445 aa23.27■■□□□ 1.31
SNX6-202ENST00000396526 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
SNX6-202ENST00000396526 SIN3AQ96ST3 1273 aa23.24■■□□□ 1.31
SNX6-202ENST00000396526 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
SNX6-202ENST00000396526 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
SNX6-202ENST00000396526 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
SNX6-202ENST00000396526 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
SNX6-202ENST00000396526 ZNF777Q9ULD5 760 aaPredicted RBP23.17■■□□□ 1.3
SNX6-202ENST00000396526 ABCA8O94911 1581 aa23.16■■□□□ 1.3
SNX6-202ENST00000396526 DAPK1P53355 1430 aa23.15■■□□□ 1.3
SNX6-202ENST00000396526 ATP10BO94823 1461 aa23.13■■□□□ 1.29
SNX6-202ENST00000396526 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
SNX6-202ENST00000396526 ITSN2Q9NZM3 1697 aa23.11■■□□□ 1.29
SNX6-202ENST00000396526 CHD1O14646 1710 aa23.11■■□□□ 1.29
SNX6-202ENST00000396526 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms