RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 RUSC2Q8N2Y8 1516 aa31.62■■■□□ 2.65
FXN-203ENST00000396366 CUL7Q14999 1698 aa31.6■■■□□ 2.65
FXN-203ENST00000396366 CARMIL1Q5VZK9 1371 aa31.55■■■□□ 2.64
FXN-203ENST00000396366 KIAA0586Q9BVV6 1533 aa31.5■■■□□ 2.63
FXN-203ENST00000396366 RAPGEF2Q9Y4G8 1499 aa31.27■■■□□ 2.6
FXN-203ENST00000396366 TTBK1Q5TCY1 1321 aaPredicted RBP31.24■■■□□ 2.59
FXN-203ENST00000396366 IQGAP2Q13576 1575 aa31.24■■■□□ 2.59
FXN-203ENST00000396366 ADCY10Q96PN6 1610 aa31.24■■■□□ 2.59
FXN-203ENST00000396366 NPM1P06748 294 aaKnown RBP eCLIP31.19■■■□□ 2.58
FXN-203ENST00000396366 PTPRGP23470 1445 aa31.18■■■□□ 2.58
FXN-203ENST00000396366 KIF13AQ9H1H9 1805 aa31.17■■■□□ 2.58
FXN-203ENST00000396366 CARMIL2Q6F5E8 1435 aa31.15■■■□□ 2.58
FXN-203ENST00000396366 TNIKQ9UKE5 1360 aa31.13■■■□□ 2.57
FXN-203ENST00000396366 DISP1Q96F81 1524 aa31.11■■■□□ 2.57
FXN-203ENST00000396366 MAPKBP1O60336 1514 aa31.08■■■□□ 2.57
FXN-203ENST00000396366 FAM69CQ0P6D2 419 aa31.07■■■□□ 2.56
FXN-203ENST00000396366 UGGT2Q9NYU1 1516 aa31.05■■■□□ 2.56
FXN-203ENST00000396366 ABCC10Q5T3U5 1492 aa31.04■■■□□ 2.56
FXN-203ENST00000396366 PRXQ9BXM0 1461 aa31.02■■■□□ 2.56
FXN-203ENST00000396366 CTTNBP2Q8WZ74 1663 aa30.98■■■□□ 2.55
FXN-203ENST00000396366 DIP2BQ9P265 1576 aa30.98■■■□□ 2.55
FXN-203ENST00000396366 KIAA0556O60303 1618 aa30.96■■■□□ 2.55
FXN-203ENST00000396366 ABCC2Q92887 1545 aa30.94■■■□□ 2.54
FXN-203ENST00000396366 UACAQ9BZF9 1416 aa30.94■■■□□ 2.54
FXN-203ENST00000396366 UHRF1BP1LA0JNW5 1464 aa30.91■■■□□ 2.54
FXN-203ENST00000396366 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
FXN-203ENST00000396366 ASXL2Q76L83 1435 aa30.84■■■□□ 2.53
FXN-203ENST00000396366 TSPOAP1O95153 1857 aa30.82■■■□□ 2.53
FXN-203ENST00000396366 FAM9AQ8IZU1 332 aaPredicted RBP30.8■■■□□ 2.52
FXN-203ENST00000396366 GOLGA3Q08378 1498 aa30.79■■■□□ 2.52
FXN-203ENST00000396366 KDM5BQ9UGL1 1544 aa30.78■■■□□ 2.52
FXN-203ENST00000396366 PLB1Q6P1J6 1458 aa30.77■■■□□ 2.52
FXN-203ENST00000396366 ZCCHC11Q5TAX3 1644 aaKnown RBP30.75■■■□□ 2.51
FXN-203ENST00000396366 P3H3Q8IVL6 736 aa30.73■■■□□ 2.51
FXN-203ENST00000396366 EEA1Q15075 1411 aa30.71■■■□□ 2.51
FXN-203ENST00000396366 GLI2P10070 1586 aa30.67■■■□□ 2.5
FXN-203ENST00000396366 ABCA8O94911 1581 aa30.66■■■□□ 2.5
FXN-203ENST00000396366 EPRSP07814 1512 aaKnown RBP30.65■■■□□ 2.5
FXN-203ENST00000396366 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
FXN-203ENST00000396366 KDM6BO15054 1643 aa30.62■■■□□ 2.49
FXN-203ENST00000396366 RANGAP1P46060 587 aaPredicted RBP30.62■■■□□ 2.49
FXN-203ENST00000396366 PPRC1Q5VV67 1664 aaKnown RBP30.62■■■□□ 2.49
FXN-203ENST00000396366 AEBP2Q6ZN18 517 aaPredicted RBP30.6■■■□□ 2.49
FXN-203ENST00000396366 SAMD9Q5K651 1589 aa30.57■■■□□ 2.48
FXN-203ENST00000396366 ARID3CA6NKF2 412 aa30.56■■■□□ 2.48
FXN-203ENST00000396366 WDR7Q9Y4E6 1490 aa30.56■■■□□ 2.48
FXN-203ENST00000396366 MAP3K4Q9Y6R4 1608 aa30.54■■■□□ 2.48
FXN-203ENST00000396366 KCNH8Q96L42 1107 aa30.52■■■□□ 2.48
FXN-203ENST00000396366 EHMT2Q96KQ7 1210 aa30.51■■■□□ 2.47
FXN-203ENST00000396366 KIF21BO75037 1637 aa30.49■■■□□ 2.47
FXN-203ENST00000396366 ATP10BO94823 1461 aa30.45■■■□□ 2.47
FXN-203ENST00000396366 COL17A1Q9UMD9 1497 aaPredicted RBP30.44■■■□□ 2.46
FXN-203ENST00000396366 FHOD3Q2V2M9 1422 aa30.42■■■□□ 2.46
FXN-203ENST00000396366 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
FXN-203ENST00000396366 TEX14Q8IWB6 1497 aa30.38■■■□□ 2.45
FXN-203ENST00000396366 CD109Q6YHK3 1445 aa30.37■■■□□ 2.45
FXN-203ENST00000396366 UBTFP17480 764 aaKnown RBP30.34■■■□□ 2.45
FXN-203ENST00000396366 CFAP43Q8NDM7 1665 aa30.33■■■□□ 2.45
FXN-203ENST00000396366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.32■■■□□ 2.44
FXN-203ENST00000396366 HNRNPUL2Q1KMD3 747 aaKnown RBP30.32■■■□□ 2.44
FXN-203ENST00000396366 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
FXN-203ENST00000396366 MAGI3Q5TCQ9 1506 aa30.29■■■□□ 2.44
FXN-203ENST00000396366 KDM4FA0A1W2PPD8 638 aa30.29■■■□□ 2.44
FXN-203ENST00000396366 EFCAB5A4FU69 1503 aa30.27■■■□□ 2.44
FXN-203ENST00000396366 ABCA9Q8IUA7 1624 aa30.18■■■□□ 2.42
FXN-203ENST00000396366 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
FXN-203ENST00000396366 PLEKHD1A6NEE1 506 aa30.12■■■□□ 2.41
FXN-203ENST00000396366 ATP1B4Q9UN42 357 aaPredicted RBP30.07■■■□□ 2.4
FXN-203ENST00000396366 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
FXN-203ENST00000396366 ARAP3Q8WWN8 1544 aa30.06■■■□□ 2.4
FXN-203ENST00000396366 ADGRL1O94910 1474 aa30.06■■■□□ 2.4
FXN-203ENST00000396366 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
FXN-203ENST00000396366 RAPGEF3O95398 923 aa29.99■■■□□ 2.39
FXN-203ENST00000396366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.98■■■□□ 2.39
FXN-203ENST00000396366 PHLDB1Q86UU1 1377 aa29.97■■■□□ 2.39
FXN-203ENST00000396366 NEO1Q92859 1461 aa29.97■■■□□ 2.39
FXN-203ENST00000396366 HECW1Q76N89 1606 aa29.94■■■□□ 2.38
FXN-203ENST00000396366 TTC37Q6PGP7 1564 aa29.94■■■□□ 2.38
FXN-203ENST00000396366 LRRIQ1Q96JM4 1722 aa29.88■■■□□ 2.37
FXN-203ENST00000396366 AKNAQ7Z591 1439 aa29.86■■■□□ 2.37
FXN-203ENST00000396366 FANCAO15360 1455 aa29.86■■■□□ 2.37
FXN-203ENST00000396366 FRMPD1Q5SYB0 1578 aa29.86■■■□□ 2.37
FXN-203ENST00000396366 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
FXN-203ENST00000396366 DENND4BO75064 1496 aaPredicted RBP29.79■■■□□ 2.36
FXN-203ENST00000396366 KIF14Q15058 1648 aa29.78■■■□□ 2.36
FXN-203ENST00000396366 PCF11O94913 1555 aaKnown RBP29.78■■■□□ 2.36
FXN-203ENST00000396366 PLCH2O75038 1416 aa29.78■■■□□ 2.36
FXN-203ENST00000396366 CASKIN1Q8WXD9 1431 aa29.77■■■□□ 2.36
FXN-203ENST00000396366 CFAP74Q9C0B2 1584 aa29.77■■■□□ 2.36
FXN-203ENST00000396366 RICTORQ6R327 1708 aa29.76■■■□□ 2.36
FXN-203ENST00000396366 CLIP1P30622 1438 aa29.76■■■□□ 2.35
FXN-203ENST00000396366 TROQ12816 1431 aaPredicted RBP29.75■■■□□ 2.35
FXN-203ENST00000396366 MYO5CQ9NQX4 1742 aa29.7■■■□□ 2.34
FXN-203ENST00000396366 SCAPERQ9BY12 1400 aa29.68■■■□□ 2.34
FXN-203ENST00000396366 EFCAB2Q5VUJ9 269 aa29.67■■■□□ 2.34
FXN-203ENST00000396366 ARID4BQ4LE39 1312 aaPredicted RBP29.66■■■□□ 2.34
FXN-203ENST00000396366 CCDC18Q5T9S5 1454 aa29.65■■■□□ 2.34
FXN-203ENST00000396366 FYCO1Q9BQS8 1478 aa29.62■■■□□ 2.33
FXN-203ENST00000396366 ARHGEF40Q8TER5 1519 aa29.62■■■□□ 2.33
FXN-203ENST00000396366 YEATS2Q9ULM3 1422 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms