RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 LRRC9Q6ZRR7 1453 aa20.36■□□□□ 0.85
MYD88-201ENST00000396334 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
MYD88-201ENST00000396334 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
MYD88-201ENST00000396334 IGF1RP08069 1367 aa20.32■□□□□ 0.84
MYD88-201ENST00000396334 ITGAEP38570 1179 aa20.29■□□□□ 0.84
MYD88-201ENST00000396334 PHLDB1Q86UU1 1377 aa20.29■□□□□ 0.84
MYD88-201ENST00000396334 RBM19Q9Y4C8 960 aaKnown RBP20.26■□□□□ 0.83
MYD88-201ENST00000396334 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
MYD88-201ENST00000396334 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
MYD88-201ENST00000396334 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
MYD88-201ENST00000396334 FKBP8Q14318 412 aa20.23■□□□□ 0.83
MYD88-201ENST00000396334 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
MYD88-201ENST00000396334 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
MYD88-201ENST00000396334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.19■□□□□ 0.82
MYD88-201ENST00000396334 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
MYD88-201ENST00000396334 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
MYD88-201ENST00000396334 CCER2I3L3R5 266 aa20.17■□□□□ 0.82
MYD88-201ENST00000396334 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
MYD88-201ENST00000396334 MSH5O43196 834 aa20.15■□□□□ 0.82
MYD88-201ENST00000396334 FYCO1Q9BQS8 1478 aa20.13■□□□□ 0.81
MYD88-201ENST00000396334 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.811e-6■■■■■ 35.7
MYD88-201ENST00000396334 PRKCSHP14314 528 aaPredicted RBP20.12■□□□□ 0.81
MYD88-201ENST00000396334 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
MYD88-201ENST00000396334 FAM50AQ14320 339 aaKnown RBP20.09■□□□□ 0.81
MYD88-201ENST00000396334 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.8
MYD88-201ENST00000396334 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
MYD88-201ENST00000396334 CTTNBP2Q8WZ74 1663 aa20.03■□□□□ 0.8
MYD88-201ENST00000396334 FHOD3Q2V2M9 1422 aa20.02■□□□□ 0.8
MYD88-201ENST00000396334 ANP32CO43423 234 aa20.01■□□□□ 0.79
MYD88-201ENST00000396334 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
MYD88-201ENST00000396334 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
MYD88-201ENST00000396334 NEFLP07196 543 aa20■□□□□ 0.79
MYD88-201ENST00000396334 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
MYD88-201ENST00000396334 CUL7Q14999 1698 aa19.99■□□□□ 0.79
MYD88-201ENST00000396334 PTPN23Q9H3S7 1636 aa19.99■□□□□ 0.79
MYD88-201ENST00000396334 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
MYD88-201ENST00000396334 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
MYD88-201ENST00000396334 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
MYD88-201ENST00000396334 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
MYD88-201ENST00000396334 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
MYD88-201ENST00000396334 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
MYD88-201ENST00000396334 TRIM52Q96A61 297 aa19.95■□□□□ 0.78
MYD88-201ENST00000396334 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
MYD88-201ENST00000396334 TONSLQ96HA7 1378 aa19.94■□□□□ 0.78
MYD88-201ENST00000396334 LRRIQ1Q96JM4 1722 aa19.94■□□□□ 0.78
MYD88-201ENST00000396334 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
MYD88-201ENST00000396334 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
MYD88-201ENST00000396334 FMN1Q68DA7 1419 aa19.92■□□□□ 0.78
MYD88-201ENST00000396334 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
MYD88-201ENST00000396334 SAMD9Q5K651 1589 aa19.89■□□□□ 0.77
MYD88-201ENST00000396334 NAIPQ13075 1403 aa19.88■□□□□ 0.77
MYD88-201ENST00000396334 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
MYD88-201ENST00000396334 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
MYD88-201ENST00000396334 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
MYD88-201ENST00000396334 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
MYD88-201ENST00000396334 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
MYD88-201ENST00000396334 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.77
MYD88-201ENST00000396334 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
MYD88-201ENST00000396334 FANCIQ9NVI1 1328 aa19.83■□□□□ 0.77
MYD88-201ENST00000396334 GRIN2BQ13224 1484 aa19.83■□□□□ 0.77
MYD88-201ENST00000396334 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
MYD88-201ENST00000396334 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
MYD88-201ENST00000396334 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
MYD88-201ENST00000396334 ERICH6Q7L0X2 663 aa19.81■□□□□ 0.76
MYD88-201ENST00000396334 HECW1Q76N89 1606 aa19.81■□□□□ 0.76
MYD88-201ENST00000396334 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
MYD88-201ENST00000396334 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
MYD88-201ENST00000396334 UGGT2Q9NYU1 1516 aa19.78■□□□□ 0.76
MYD88-201ENST00000396334 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
MYD88-201ENST00000396334 DENND4BO75064 1496 aaPredicted RBP19.77■□□□□ 0.76
MYD88-201ENST00000396334 DEKP35659 375 aaKnown RBP19.76■□□□□ 0.75
MYD88-201ENST00000396334 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
MYD88-201ENST00000396334 ABCA5Q8WWZ7 1642 aa19.74■□□□□ 0.75
MYD88-201ENST00000396334 WASHC2AQ641Q2 1341 aa19.74■□□□□ 0.75
MYD88-201ENST00000396334 IRX6P78412 446 aaPredicted RBP19.73■□□□□ 0.75
MYD88-201ENST00000396334 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
MYD88-201ENST00000396334 AKNAQ7Z591 1439 aa19.72■□□□□ 0.75
MYD88-201ENST00000396334 HNRNPUQ00839 825 aaKnown RBP eCLIP19.72■□□□□ 0.75
MYD88-201ENST00000396334 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
MYD88-201ENST00000396334 CNTLNQ9NXG0 1405 aa19.7■□□□□ 0.74
MYD88-201ENST00000396334 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
MYD88-201ENST00000396334 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
MYD88-201ENST00000396334 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
MYD88-201ENST00000396334 KDM6BO15054 1643 aa19.67■□□□□ 0.74
MYD88-201ENST00000396334 POLR1AO95602 1720 aaPredicted RBP19.64■□□□□ 0.74
MYD88-201ENST00000396334 NCOA1Q15788 1441 aa19.64■□□□□ 0.73
MYD88-201ENST00000396334 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
MYD88-201ENST00000396334 NESP48681 1621 aa19.61■□□□□ 0.73
MYD88-201ENST00000396334 EIF4G2P78344 907 aaKnown RBP eCLIP19.61■□□□□ 0.73
MYD88-201ENST00000396334 PPP4R2Q9NY27 417 aa19.61■□□□□ 0.73
MYD88-201ENST00000396334 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
MYD88-201ENST00000396334 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
MYD88-201ENST00000396334 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
MYD88-201ENST00000396334 CCDC7Q96M83 1385 aa19.58■□□□□ 0.73
MYD88-201ENST00000396334 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
MYD88-201ENST00000396334 MIA2Q96PC5 1412 aa19.57■□□□□ 0.72
MYD88-201ENST00000396334 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
MYD88-201ENST00000396334 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
MYD88-201ENST00000396334 ZBED9Q6R2W3 1325 aa19.54■□□□□ 0.72
MYD88-201ENST00000396334 NBR1Q14596 966 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms