RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 NUP160Q12769 1436 aa39.21■■■■□ 3.87
CTF1-202ENST00000395019 CEP162Q5TB80 1403 aa39.14■■■■□ 3.86
CTF1-202ENST00000395019 CTTNBP2Q8WZ74 1663 aa39.14■■■■□ 3.86
CTF1-202ENST00000395019 CLASP1Q7Z460 1538 aa39.1■■■■□ 3.85
CTF1-202ENST00000395019 OSCARQ8IYS5 282 aa39.1■■■■□ 3.85
CTF1-202ENST00000395019 KIAA0586Q9BVV6 1533 aa39■■■■□ 3.83
CTF1-202ENST00000395019 IQGAP2Q13576 1575 aa38.97■■■■□ 3.83
CTF1-202ENST00000395019 SHROOM2Q13796 1616 aa38.88■■■■□ 3.82
CTF1-202ENST00000395019 CLIP1P30622 1438 aa38.87■■■■□ 3.81
CTF1-202ENST00000395019 JPH4Q96JJ6 628 aa38.78■■■■□ 3.8
CTF1-202ENST00000395019 ERCC6L2Q5T890 1561 aa38.76■■■■□ 3.8
CTF1-202ENST00000395019 RANGAP1P46060 587 aaPredicted RBP38.76■■■■□ 3.8
CTF1-202ENST00000395019 UGGT2Q9NYU1 1516 aa38.76■■■■□ 3.79
CTF1-202ENST00000395019 PRG4Q92954 1404 aaPredicted RBP38.68■■■■□ 3.78
CTF1-202ENST00000395019 DISP1Q96F81 1524 aa38.66■■■■□ 3.78
CTF1-202ENST00000395019 SAMD9Q5K651 1589 aa38.64■■■■□ 3.78
CTF1-202ENST00000395019 KIAA0556O60303 1618 aa38.62■■■■□ 3.77
CTF1-202ENST00000395019 ARHGEF11O15085 1522 aa38.6■■■■□ 3.77
CTF1-202ENST00000395019 RIMBP3CA6NJZ7 1639 aa38.57■■■■□ 3.76
CTF1-202ENST00000395019 RIMBP3BA6NNM3 1639 aa38.57■■■■□ 3.76
CTF1-202ENST00000395019 RIMBP3Q9UFD9 1639 aa38.57■■■■□ 3.76
CTF1-202ENST00000395019 ARHGAP35Q9NRY4 1499 aa38.54■■■■□ 3.76
CTF1-202ENST00000395019 VPS8Q8N3P4 1428 aa38.53■■■■□ 3.76
CTF1-202ENST00000395019 P3H3Q8IVL6 736 aa38.52■■■■□ 3.76
CTF1-202ENST00000395019 EFCAB5A4FU69 1503 aa38.51■■■■□ 3.76
CTF1-202ENST00000395019 ARAP1Q96P48 1450 aa38.5■■■■□ 3.75
CTF1-202ENST00000395019 CARMIL2Q6F5E8 1435 aa38.49■■■■□ 3.75
CTF1-202ENST00000395019 DNAJC5Q9H3Z4 198 aa38.47■■■■□ 3.75
CTF1-202ENST00000395019 FHOD3Q2V2M9 1422 aa38.45■■■■□ 3.75
CTF1-202ENST00000395019 TTBK1Q5TCY1 1321 aaPredicted RBP38.38■■■■□ 3.73
CTF1-202ENST00000395019 PTPRGP23470 1445 aa38.27■■■■□ 3.72
CTF1-202ENST00000395019 TRIM26Q12899 539 aaPredicted RBP38.27■■■■□ 3.72
CTF1-202ENST00000395019 PPARGC1BQ86YN6 1023 aaKnown RBP38.19■■■■□ 3.7
CTF1-202ENST00000395019 PCGF6Q9BYE7 350 aa38.19■■■■□ 3.7
CTF1-202ENST00000395019 PLB1Q6P1J6 1458 aa38.17■■■■□ 3.7
CTF1-202ENST00000395019 CYB5RLQ6IPT4 315 aa38.16■■■■□ 3.7
CTF1-202ENST00000395019 ABCA8O94911 1581 aa38.14■■■■□ 3.7
CTF1-202ENST00000395019 APLP2Q06481 763 aa38.12■■■■□ 3.69
CTF1-202ENST00000395019 FMN1Q68DA7 1419 aa38.1■■■■□ 3.69
CTF1-202ENST00000395019 RAPGEF6Q8TEU7 1601 aa38.09■■■■□ 3.69
CTF1-202ENST00000395019 ADCY10Q96PN6 1610 aa38.09■■■■□ 3.69
CTF1-202ENST00000395019 PCF11O94913 1555 aaKnown RBP38.09■■■■□ 3.69
CTF1-202ENST00000395019 UACAQ9BZF9 1416 aa38.06■■■■□ 3.68
CTF1-202ENST00000395019 ABCC2Q92887 1545 aa38.02■■■■□ 3.68
CTF1-202ENST00000395019 LRRIQ1Q96JM4 1722 aa38.01■■■■□ 3.68
CTF1-202ENST00000395019 UHRF1BP1LA0JNW5 1464 aa37.96■■■■□ 3.67
CTF1-202ENST00000395019 NUP153P49790 1475 aaKnown RBP37.96■■■■□ 3.67
CTF1-202ENST00000395019 CASKIN1Q8WXD9 1431 aa37.95■■■■□ 3.67
CTF1-202ENST00000395019 HECW1Q76N89 1606 aa37.93■■■■□ 3.66
CTF1-202ENST00000395019 FYCO1Q9BQS8 1478 aa37.91■■■■□ 3.66
CTF1-202ENST00000395019 ARID3CA6NKF2 412 aa37.9■■■■□ 3.66
CTF1-202ENST00000395019 MAP3K1Q13233 1512 aa37.9■■■■□ 3.66
CTF1-202ENST00000395019 ATP1B4Q9UN42 357 aaPredicted RBP37.89■■■■□ 3.66
CTF1-202ENST00000395019 ZCCHC11Q5TAX3 1644 aaKnown RBP37.86■■■■□ 3.65
CTF1-202ENST00000395019 CDK13Q14004 1512 aaKnown RBP37.84■■■■□ 3.65
CTF1-202ENST00000395019 KDM5BQ9UGL1 1544 aa37.82■■■■□ 3.64
CTF1-202ENST00000395019 EPRSP07814 1512 aaKnown RBP37.8■■■■□ 3.64
CTF1-202ENST00000395019 ATP10BO94823 1461 aa37.8■■■■□ 3.64
CTF1-202ENST00000395019 TIAM1Q13009 1591 aa37.8■■■■□ 3.64
CTF1-202ENST00000395019 KANK4Q5T7N3 995 aaPredicted RBP37.77■■■■□ 3.64
CTF1-202ENST00000395019 CFAP43Q8NDM7 1665 aa37.72■■■■□ 3.63
CTF1-202ENST00000395019 CCDC18Q5T9S5 1454 aa37.68■■■■□ 3.62
CTF1-202ENST00000395019 LRRC9Q6ZRR7 1453 aa37.64■■■■□ 3.62
CTF1-202ENST00000395019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.64■■■■□ 3.62
CTF1-202ENST00000395019 HNRNPUL2Q1KMD3 747 aaKnown RBP37.64■■■■□ 3.62
CTF1-202ENST00000395019 NPM1P06748 294 aaKnown RBP eCLIP37.62■■■■□ 3.61
CTF1-202ENST00000395019 MAGI3Q5TCQ9 1506 aa37.61■■■■□ 3.61
CTF1-202ENST00000395019 MAPKBP1O60336 1514 aa37.57■■■■□ 3.6
CTF1-202ENST00000395019 ASXL2Q76L83 1435 aa37.57■■■■□ 3.6
CTF1-202ENST00000395019 WDR7Q9Y4E6 1490 aa37.49■■■■□ 3.59
CTF1-202ENST00000395019 KIF14Q15058 1648 aa37.43■■■■□ 3.58
CTF1-202ENST00000395019 PLEKHD1A6NEE1 506 aa37.43■■■■□ 3.58
CTF1-202ENST00000395019 TROQ12816 1431 aaPredicted RBP37.41■■■■□ 3.58
CTF1-202ENST00000395019 EHBP1L1Q8N3D4 1523 aa37.38■■■■□ 3.58
CTF1-202ENST00000395019 MTUS2Q5JR59 1369 aa37.38■■■■□ 3.57
CTF1-202ENST00000395019 CDK11AQ9UQ88 783 aaPredicted RBP37.38■■■■□ 3.57
CTF1-202ENST00000395019 RRBP1Q9P2E9 1410 aaKnown RBP37.38■■■■□ 3.57
CTF1-202ENST00000395019 KCNH8Q96L42 1107 aa37.36■■■■□ 3.57
CTF1-202ENST00000395019 DIP2BQ9P265 1576 aa37.35■■■■□ 3.57
CTF1-202ENST00000395019 KIF13AQ9H1H9 1805 aa37.35■■■■□ 3.57
CTF1-202ENST00000395019 ABCC10Q5T3U5 1492 aa37.3■■■■□ 3.56
CTF1-202ENST00000395019 TTC37Q6PGP7 1564 aa37.28■■■■□ 3.56
CTF1-202ENST00000395019 PHLDB1Q86UU1 1377 aa37.28■■■■□ 3.56
CTF1-202ENST00000395019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.27■■■■□ 3.56
CTF1-202ENST00000395019 SUPT6HQ7KZ85 1726 aaKnown RBP37.27■■■■□ 3.56
CTF1-202ENST00000395019 CCNB3Q8WWL7 1395 aa37.25■■■■□ 3.55
CTF1-202ENST00000395019 ABCA9Q8IUA7 1624 aa37.23■■■■□ 3.55
CTF1-202ENST00000395019 GLI2P10070 1586 aa37.21■■■■□ 3.55
CTF1-202ENST00000395019 NCOA2Q15596 1464 aa37.19■■■■□ 3.54
CTF1-202ENST00000395019 FAM69CQ0P6D2 419 aa37.18■■■■□ 3.54
CTF1-202ENST00000395019 MAP3K4Q9Y6R4 1608 aa37.17■■■■□ 3.54
CTF1-202ENST00000395019 CDC42BPAQ5VT25 1732 aa37.16■■■■□ 3.54
CTF1-202ENST00000395019 TSPOAP1O95153 1857 aa37.13■■■■□ 3.54
CTF1-202ENST00000395019 MYO5CQ9NQX4 1742 aa37.12■■■■□ 3.53
CTF1-202ENST00000395019 HRCP23327 699 aa37.08■■■■□ 3.53
CTF1-202ENST00000395019 CDC42BPBQ9Y5S2 1711 aa37.08■■■■□ 3.53
CTF1-202ENST00000395019 TRHP20396 242 aaPredicted RBP37.07■■■■□ 3.53
CTF1-202ENST00000395019 PPRC1Q5VV67 1664 aaKnown RBP37.07■■■■□ 3.52
CTF1-202ENST00000395019 PREX2Q70Z35 1606 aa37.05■■■■□ 3.52
CTF1-202ENST00000395019 CD109Q6YHK3 1445 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms