RNA–Protein interactions for RNA: ENST00000394938.8

RPL23A-203, Transcript of ribosomal protein L23a, humanhuman

TSL 2 BASIC

Gene RPL23A, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-203ENST00000394938 ARHGEF11O15085 1522 aa13.52□□□□□ -0.25
RPL23A-203ENST00000394938 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
RPL23A-203ENST00000394938 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
RPL23A-203ENST00000394938 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
RPL23A-203ENST00000394938 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
RPL23A-203ENST00000394938 GRIN2AQ12879 1464 aa13.45□□□□□ -0.26
RPL23A-203ENST00000394938 ADAMTS12P58397 1594 aa13.44□□□□□ -0.26
RPL23A-203ENST00000394938 POTEHQ6S545 545 aa13.43□□□□□ -0.26
RPL23A-203ENST00000394938 NUP160Q12769 1436 aa13.42□□□□□ -0.26
RPL23A-203ENST00000394938 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
RPL23A-203ENST00000394938 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
RPL23A-203ENST00000394938 ARAP1Q96P48 1450 aa13.4□□□□□ -0.26
RPL23A-203ENST00000394938 IGF1RP08069 1367 aa13.38□□□□□ -0.27
RPL23A-203ENST00000394938 CEP170Q5SW79 1584 aa13.36□□□□□ -0.27
RPL23A-203ENST00000394938 CUL7Q14999 1698 aa13.34□□□□□ -0.27
RPL23A-203ENST00000394938 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
RPL23A-203ENST00000394938 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
RPL23A-203ENST00000394938 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
RPL23A-203ENST00000394938 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
RPL23A-203ENST00000394938 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
RPL23A-203ENST00000394938 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
RPL23A-203ENST00000394938 PRG4Q92954 1404 aaPredicted RBP13.24□□□□□ -0.29
RPL23A-203ENST00000394938 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
RPL23A-203ENST00000394938 RAPGEF2Q9Y4G8 1499 aa13.18□□□□□ -0.3
RPL23A-203ENST00000394938 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
RPL23A-203ENST00000394938 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
RPL23A-203ENST00000394938 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
RPL23A-203ENST00000394938 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
RPL23A-203ENST00000394938 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
RPL23A-203ENST00000394938 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
RPL23A-203ENST00000394938 PTPRGP23470 1445 aa13.09□□□□□ -0.31
RPL23A-203ENST00000394938 EEA1Q15075 1411 aa13.09□□□□□ -0.31
RPL23A-203ENST00000394938 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPL23A-203ENST00000394938 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
RPL23A-203ENST00000394938 DISP1Q96F81 1524 aa13.05□□□□□ -0.32
RPL23A-203ENST00000394938 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
RPL23A-203ENST00000394938 ADCY10Q96PN6 1610 aa13.04□□□□□ -0.32
RPL23A-203ENST00000394938 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
RPL23A-203ENST00000394938 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.33
RPL23A-203ENST00000394938 GOLGA3Q08378 1498 aa13.02□□□□□ -0.33
RPL23A-203ENST00000394938 ABCC2Q92887 1545 aa12.99□□□□□ -0.33
RPL23A-203ENST00000394938 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
RPL23A-203ENST00000394938 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
RPL23A-203ENST00000394938 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
RPL23A-203ENST00000394938 ABCC10Q5T3U5 1492 aa12.98□□□□□ -0.33
RPL23A-203ENST00000394938 FAM69CQ0P6D2 419 aa12.95□□□□□ -0.34
RPL23A-203ENST00000394938 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
RPL23A-203ENST00000394938 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
RPL23A-203ENST00000394938 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
RPL23A-203ENST00000394938 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
RPL23A-203ENST00000394938 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
RPL23A-203ENST00000394938 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
RPL23A-203ENST00000394938 KIF21BO75037 1637 aa12.91□□□□□ -0.34
RPL23A-203ENST00000394938 ASXL2Q76L83 1435 aa12.9□□□□□ -0.34
RPL23A-203ENST00000394938 ABCA8O94911 1581 aa12.89□□□□□ -0.35
RPL23A-203ENST00000394938 GLI2P10070 1586 aa12.89□□□□□ -0.35
RPL23A-203ENST00000394938 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
RPL23A-203ENST00000394938 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
RPL23A-203ENST00000394938 ZCCHC11Q5TAX3 1644 aaKnown RBP12.86□□□□□ -0.35
RPL23A-203ENST00000394938 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
RPL23A-203ENST00000394938 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.36
RPL23A-203ENST00000394938 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
RPL23A-203ENST00000394938 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
RPL23A-203ENST00000394938 TSPOAP1O95153 1857 aa12.81□□□□□ -0.36
RPL23A-203ENST00000394938 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
RPL23A-203ENST00000394938 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
RPL23A-203ENST00000394938 MAP3K4Q9Y6R4 1608 aa12.79□□□□□ -0.36
RPL23A-203ENST00000394938 ATP10BO94823 1461 aa12.78□□□□□ -0.36
RPL23A-203ENST00000394938 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.36
RPL23A-203ENST00000394938 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.37
RPL23A-203ENST00000394938 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
RPL23A-203ENST00000394938 KDM6BO15054 1643 aa12.75□□□□□ -0.37
RPL23A-203ENST00000394938 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
RPL23A-203ENST00000394938 FHOD3Q2V2M9 1422 aa12.74□□□□□ -0.37
RPL23A-203ENST00000394938 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
RPL23A-203ENST00000394938 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
RPL23A-203ENST00000394938 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
RPL23A-203ENST00000394938 CD109Q6YHK3 1445 aa12.72□□□□□ -0.37
RPL23A-203ENST00000394938 RANGAP1P46060 587 aaPredicted RBP12.72□□□□□ -0.37
RPL23A-203ENST00000394938 FMN1Q68DA7 1419 aa12.71□□□□□ -0.37
RPL23A-203ENST00000394938 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
RPL23A-203ENST00000394938 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
RPL23A-203ENST00000394938 PLEKHD1A6NEE1 506 aa12.69□□□□□ -0.38
RPL23A-203ENST00000394938 ABCA9Q8IUA7 1624 aa12.68□□□□□ -0.38
RPL23A-203ENST00000394938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
RPL23A-203ENST00000394938 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
RPL23A-203ENST00000394938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.387e-8■■□□□ 13.2
RPL23A-203ENST00000394938 COL17A1Q9UMD9 1497 aaPredicted RBP12.66□□□□□ -0.38
RPL23A-203ENST00000394938 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
RPL23A-203ENST00000394938 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
RPL23A-203ENST00000394938 ARAP3Q8WWN8 1544 aa12.64□□□□□ -0.39
RPL23A-203ENST00000394938 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
RPL23A-203ENST00000394938 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
RPL23A-203ENST00000394938 NEO1Q92859 1461 aa12.61□□□□□ -0.39
RPL23A-203ENST00000394938 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
RPL23A-203ENST00000394938 CLIP1P30622 1438 aa12.58□□□□□ -0.4
RPL23A-203ENST00000394938 CASKIN1Q8WXD9 1431 aa12.58□□□□□ -0.4
RPL23A-203ENST00000394938 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
RPL23A-203ENST00000394938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.47e-15■■□□□ 12
RPL23A-203ENST00000394938 DSG3P32926 999 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms