RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 NPM1P06748 294 aaKnown RBP eCLIP35.17■■■■□ 3.22
UPK3B-203ENST00000394849 RUSC2Q8N2Y8 1516 aa35.14■■■■□ 3.22
UPK3B-203ENST00000394849 ABCC10Q5T3U5 1492 aa35.11■■■■□ 3.21
UPK3B-203ENST00000394849 MAPKBP1O60336 1514 aa35.09■■■■□ 3.21
UPK3B-203ENST00000394849 FAM69CQ0P6D2 419 aa35.08■■■■□ 3.21
UPK3B-203ENST00000394849 KIAA0586Q9BVV6 1533 aa34.97■■■■□ 3.19
UPK3B-203ENST00000394849 DIP2BQ9P265 1576 aa34.96■■■■□ 3.19
UPK3B-203ENST00000394849 ADCY10Q96PN6 1610 aa34.96■■■■□ 3.19
UPK3B-203ENST00000394849 CUL7Q14999 1698 aa34.88■■■■□ 3.17
UPK3B-203ENST00000394849 KIF27Q86VH2 1401 aa34.87■■■■□ 3.17
UPK3B-203ENST00000394849 IGF1RP08069 1367 aa34.87■■■■□ 3.17
UPK3B-203ENST00000394849 KDM6BO15054 1643 aa34.82■■■■□ 3.16
UPK3B-203ENST00000394849 PTPRGP23470 1445 aa34.74■■■■□ 3.15
UPK3B-203ENST00000394849 TSPOAP1O95153 1857 aa34.72■■■■□ 3.15
UPK3B-203ENST00000394849 CARMIL2Q6F5E8 1435 aa34.69■■■■□ 3.14
UPK3B-203ENST00000394849 KDM4FA0A1W2PPD8 638 aa34.66■■■■□ 3.14
UPK3B-203ENST00000394849 CARMIL1Q5VZK9 1371 aa34.64■■■■□ 3.14
UPK3B-203ENST00000394849 TNIKQ9UKE5 1360 aa34.64■■■■□ 3.14
UPK3B-203ENST00000394849 ABCC2Q92887 1545 aa34.63■■■■□ 3.13
UPK3B-203ENST00000394849 PLB1Q6P1J6 1458 aa34.58■■■■□ 3.13
UPK3B-203ENST00000394849 GLI2P10070 1586 aa34.54■■■■□ 3.12
UPK3B-203ENST00000394849 IQGAP2Q13576 1575 aa34.53■■■■□ 3.12
UPK3B-203ENST00000394849 UHRF1BP1LA0JNW5 1464 aa34.53■■■■□ 3.12
UPK3B-203ENST00000394849 ASXL2Q76L83 1435 aa34.53■■■■□ 3.12
UPK3B-203ENST00000394849 TTBK1Q5TCY1 1321 aaPredicted RBP34.51■■■■□ 3.11
UPK3B-203ENST00000394849 UACAQ9BZF9 1416 aa34.46■■■■□ 3.11
UPK3B-203ENST00000394849 PPRC1Q5VV67 1664 aaKnown RBP34.42■■■■□ 3.1
UPK3B-203ENST00000394849 DISP1Q96F81 1524 aa34.37■■■■□ 3.09
UPK3B-203ENST00000394849 KDM5BQ9UGL1 1544 aa34.35■■■■□ 3.09
UPK3B-203ENST00000394849 EPRSP07814 1512 aaKnown RBP34.32■■■■□ 3.08
UPK3B-203ENST00000394849 TEX14Q8IWB6 1497 aa34.32■■■■□ 3.08
UPK3B-203ENST00000394849 UGGT2Q9NYU1 1516 aa34.31■■■■□ 3.08
UPK3B-203ENST00000394849 MAP3K4Q9Y6R4 1608 aa34.3■■■■□ 3.08
UPK3B-203ENST00000394849 RAPGEF2Q9Y4G8 1499 aa34.28■■■■□ 3.08
UPK3B-203ENST00000394849 ADGRL1O94910 1474 aa34.27■■■■□ 3.08
UPK3B-203ENST00000394849 ZCCHC11Q5TAX3 1644 aaKnown RBP34.22■■■■□ 3.07
UPK3B-203ENST00000394849 COL17A1Q9UMD9 1497 aaPredicted RBP34.21■■■■□ 3.07
UPK3B-203ENST00000394849 KIAA0556O60303 1618 aa34.2■■■■□ 3.07
UPK3B-203ENST00000394849 WDR7Q9Y4E6 1490 aa34.13■■■■□ 3.05
UPK3B-203ENST00000394849 ILDR1Q86SU0 546 aaPredicted RBP34.12■■■■□ 3.05
UPK3B-203ENST00000394849 GOLGA3Q08378 1498 aa34.05■■■■□ 3.04
UPK3B-203ENST00000394849 CTTNBP2Q8WZ74 1663 aa34.01■■■■□ 3.04
UPK3B-203ENST00000394849 MAGI3Q5TCQ9 1506 aa34■■■■□ 3.03
UPK3B-203ENST00000394849 CFAP43Q8NDM7 1665 aa33.99■■■■□ 3.03
UPK3B-203ENST00000394849 CD109Q6YHK3 1445 aa33.98■■■■□ 3.03
UPK3B-203ENST00000394849 HECW2Q9P2P5 1572 aa33.97■■■■□ 3.03
UPK3B-203ENST00000394849 ABCA8O94911 1581 aa33.93■■■■□ 3.02
UPK3B-203ENST00000394849 FAM9AQ8IZU1 332 aaPredicted RBP33.89■■■■□ 3.02
UPK3B-203ENST00000394849 KCNH8Q96L42 1107 aa33.89■■■■□ 3.02
UPK3B-203ENST00000394849 PRXQ9BXM0 1461 aa33.77■■■■□ 3
UPK3B-203ENST00000394849 ARAP3Q8WWN8 1544 aa33.77■■■■□ 3
UPK3B-203ENST00000394849 PHLDB1Q86UU1 1377 aa33.73■■■□□ 2.99
UPK3B-203ENST00000394849 KIF21BO75037 1637 aa33.68■■■□□ 2.98
UPK3B-203ENST00000394849 ATP10BO94823 1461 aa33.64■■■□□ 2.98
UPK3B-203ENST00000394849 ABCA9Q8IUA7 1624 aa33.61■■■□□ 2.97
UPK3B-203ENST00000394849 NEO1Q92859 1461 aa33.55■■■□□ 2.96
UPK3B-203ENST00000394849 ARID3CA6NKF2 412 aa33.53■■■□□ 2.96
UPK3B-203ENST00000394849 P3H3Q8IVL6 736 aa33.53■■■□□ 2.96
UPK3B-203ENST00000394849 ADAMTSL3P82987 1691 aa33.51■■■□□ 2.95
UPK3B-203ENST00000394849 SAMD9Q5K651 1589 aa33.49■■■□□ 2.95
UPK3B-203ENST00000394849 PTPRMP28827 1452 aa33.49■■■□□ 2.95
UPK3B-203ENST00000394849 RAPGEF6Q8TEU7 1601 aa33.47■■■□□ 2.95
UPK3B-203ENST00000394849 RAPGEF3O95398 923 aa33.45■■■□□ 2.95
UPK3B-203ENST00000394849 FBXO41Q8TF61 875 aa33.45■■■□□ 2.95
UPK3B-203ENST00000394849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.42■■■□□ 2.94
UPK3B-203ENST00000394849 HNRNPUL2Q1KMD3 747 aaKnown RBP33.42■■■□□ 2.94
UPK3B-203ENST00000394849 CSRNP3Q8WYN3 585 aa33.4■■■□□ 2.94
UPK3B-203ENST00000394849 BCORL1Q5H9F3 1711 aa33.38■■■□□ 2.93
UPK3B-203ENST00000394849 ARID4BQ4LE39 1312 aaPredicted RBP33.34■■■□□ 2.93
UPK3B-203ENST00000394849 FRMPD1Q5SYB0 1578 aa33.34■■■□□ 2.93
UPK3B-203ENST00000394849 NUP153P49790 1475 aaKnown RBP33.33■■■□□ 2.93
UPK3B-203ENST00000394849 MADDQ8WXG6 1647 aa33.29■■■□□ 2.92
UPK3B-203ENST00000394849 PLEKHD1A6NEE1 506 aa33.29■■■□□ 2.92
UPK3B-203ENST00000394849 PCF11O94913 1555 aaKnown RBP33.29■■■□□ 2.92
UPK3B-203ENST00000394849 DENND4BO75064 1496 aaPredicted RBP33.27■■■□□ 2.92
UPK3B-203ENST00000394849 ARHGEF40Q8TER5 1519 aa33.26■■■□□ 2.91
UPK3B-203ENST00000394849 CFAP74Q9C0B2 1584 aa33.26■■■□□ 2.91
UPK3B-203ENST00000394849 EEA1Q15075 1411 aa33.24■■■□□ 2.91
UPK3B-203ENST00000394849 FHOD3Q2V2M9 1422 aa33.22■■■□□ 2.91
UPK3B-203ENST00000394849 RICTORQ6R327 1708 aa33.22■■■□□ 2.91
UPK3B-203ENST00000394849 AKNAQ7Z591 1439 aa33.21■■■□□ 2.91
UPK3B-203ENST00000394849 LMTK3Q96Q04 1460 aa33.21■■■□□ 2.91
UPK3B-203ENST00000394849 POGZQ7Z3K3 1410 aa33.19■■■□□ 2.9
UPK3B-203ENST00000394849 FANCAO15360 1455 aa33.19■■■□□ 2.9
UPK3B-203ENST00000394849 RIMS1Q86UR5 1692 aaKnown RBP33.15■■■□□ 2.9
UPK3B-203ENST00000394849 ZMYM4Q5VZL5 1548 aa33.13■■■□□ 2.89
UPK3B-203ENST00000394849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.12■■■□□ 2.89
UPK3B-203ENST00000394849 MAGI2Q86UL8 1455 aa33.12■■■□□ 2.89
UPK3B-203ENST00000394849 EFCAB5A4FU69 1503 aa33.12■■■□□ 2.89
UPK3B-203ENST00000394849 RANGAP1P46060 587 aaPredicted RBP33.11■■■□□ 2.89
UPK3B-203ENST00000394849 ZFYVE16Q7Z3T8 1539 aa33.07■■■□□ 2.88
UPK3B-203ENST00000394849 TTC37Q6PGP7 1564 aa33.04■■■□□ 2.88
UPK3B-203ENST00000394849 YEATS2Q9ULM3 1422 aa32.99■■■□□ 2.87
UPK3B-203ENST00000394849 PLCH2O75038 1416 aa32.96■■■□□ 2.87
UPK3B-203ENST00000394849 HSPA2P54652 639 aa32.96■■■□□ 2.87
UPK3B-203ENST00000394849 HECW1Q76N89 1606 aa32.95■■■□□ 2.87
UPK3B-203ENST00000394849 SCAPERQ9BY12 1400 aa32.94■■■□□ 2.86
UPK3B-203ENST00000394849 FER1L4A9Z1Z3 1794 aa32.93■■■□□ 2.86
UPK3B-203ENST00000394849 SIGLEC1Q9BZZ2 1709 aa32.91■■■□□ 2.86
UPK3B-203ENST00000394849 PLPPR3Q6T4P5 718 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms