RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
PBRM1-204ENST00000394830 RAB3GAP2Q9H2M9 1393 aa19.41■□□□□ 0.7
PBRM1-204ENST00000394830 SIN3AQ96ST3 1273 aa19.4■□□□□ 0.7
PBRM1-204ENST00000394830 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
PBRM1-204ENST00000394830 IGF1RP08069 1367 aa19.37■□□□□ 0.69
PBRM1-204ENST00000394830 CFTRP13569 1480 aa19.36■□□□□ 0.69
PBRM1-204ENST00000394830 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
PBRM1-204ENST00000394830 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
PBRM1-204ENST00000394830 FKBP8Q14318 412 aa19.34■□□□□ 0.69
PBRM1-204ENST00000394830 FBLN2P98095 1184 aa19.33■□□□□ 0.69
PBRM1-204ENST00000394830 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.69
PBRM1-204ENST00000394830 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.68
PBRM1-204ENST00000394830 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
PBRM1-204ENST00000394830 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
PBRM1-204ENST00000394830 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
PBRM1-204ENST00000394830 CUX1P39880 1505 aa19.28■□□□□ 0.68
PBRM1-204ENST00000394830 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
PBRM1-204ENST00000394830 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
PBRM1-204ENST00000394830 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
PBRM1-204ENST00000394830 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
PBRM1-204ENST00000394830 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
PBRM1-204ENST00000394830 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
PBRM1-204ENST00000394830 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.67
PBRM1-204ENST00000394830 EIF4G2P78344 907 aaKnown RBP eCLIP19.22■□□□□ 0.67
PBRM1-204ENST00000394830 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
PBRM1-204ENST00000394830 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
PBRM1-204ENST00000394830 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
PBRM1-204ENST00000394830 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
PBRM1-204ENST00000394830 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.66
PBRM1-204ENST00000394830 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
PBRM1-204ENST00000394830 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
PBRM1-204ENST00000394830 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
PBRM1-204ENST00000394830 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
PBRM1-204ENST00000394830 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
PBRM1-204ENST00000394830 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
PBRM1-204ENST00000394830 FAM9BQ8IZU0 186 aa19.08■□□□□ 0.65
PBRM1-204ENST00000394830 MYT1LQ9UL68 1186 aa19.08■□□□□ 0.65
PBRM1-204ENST00000394830 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
PBRM1-204ENST00000394830 TSPY4P0CV99 314 aa19.04■□□□□ 0.64
PBRM1-204ENST00000394830 TSPY10P0CW01 314 aa19.04■□□□□ 0.64
PBRM1-204ENST00000394830 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
PBRM1-204ENST00000394830 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
PBRM1-204ENST00000394830 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
PBRM1-204ENST00000394830 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
PBRM1-204ENST00000394830 FGD6Q6ZV73 1430 aa18.99■□□□□ 0.63
PBRM1-204ENST00000394830 FYCO1Q9BQS8 1478 aa18.99■□□□□ 0.63
PBRM1-204ENST00000394830 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
PBRM1-204ENST00000394830 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
PBRM1-204ENST00000394830 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
PBRM1-204ENST00000394830 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
PBRM1-204ENST00000394830 EFCAB5A4FU69 1503 aa18.96■□□□□ 0.63
PBRM1-204ENST00000394830 HSPA5P11021 654 aaKnown RBP18.95■□□□□ 0.62
PBRM1-204ENST00000394830 MPHOSPH9Q99550 1183 aa18.94■□□□□ 0.62
PBRM1-204ENST00000394830 TOPBP1Q92547 1522 aa18.93■□□□□ 0.62
PBRM1-204ENST00000394830 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
PBRM1-204ENST00000394830 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
PBRM1-204ENST00000394830 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
PBRM1-204ENST00000394830 MYOM3Q5VTT5 1437 aa18.91■□□□□ 0.62
PBRM1-204ENST00000394830 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
PBRM1-204ENST00000394830 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
PBRM1-204ENST00000394830 UACAQ9BZF9 1416 aa18.89■□□□□ 0.62
PBRM1-204ENST00000394830 IRX6P78412 446 aaPredicted RBP18.89■□□□□ 0.61
PBRM1-204ENST00000394830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
PBRM1-204ENST00000394830 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
PBRM1-204ENST00000394830 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
PBRM1-204ENST00000394830 NESP48681 1621 aa18.85■□□□□ 0.61
PBRM1-204ENST00000394830 FOXD1Q16676 465 aa18.84■□□□□ 0.61
PBRM1-204ENST00000394830 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
PBRM1-204ENST00000394830 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
PBRM1-204ENST00000394830 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
PBRM1-204ENST00000394830 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■□□ 17.7
PBRM1-204ENST00000394830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■■□□ 19.2
PBRM1-204ENST00000394830 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
PBRM1-204ENST00000394830 PCF11O94913 1555 aaKnown RBP18.8■□□□□ 0.6
PBRM1-204ENST00000394830 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
PBRM1-204ENST00000394830 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
PBRM1-204ENST00000394830 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
PBRM1-204ENST00000394830 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
PBRM1-204ENST00000394830 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
PBRM1-204ENST00000394830 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.59
PBRM1-204ENST00000394830 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
PBRM1-204ENST00000394830 PKD2Q13563 968 aa18.75■□□□□ 0.59
PBRM1-204ENST00000394830 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
PBRM1-204ENST00000394830 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
PBRM1-204ENST00000394830 CUL7Q14999 1698 aa18.74■□□□□ 0.59
PBRM1-204ENST00000394830 ANKRD30AQ9BXX3 1397 aa18.73■□□□□ 0.59
PBRM1-204ENST00000394830 EHBP1L1Q8N3D4 1523 aa18.72■□□□□ 0.59
PBRM1-204ENST00000394830 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
PBRM1-204ENST00000394830 ERICH6BQ5W0A0 696 aa18.72■□□□□ 0.59
PBRM1-204ENST00000394830 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
PBRM1-204ENST00000394830 SALL2Q9Y467 1007 aaPredicted RBP18.68■□□□□ 0.58
PBRM1-204ENST00000394830 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
PBRM1-204ENST00000394830 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
PBRM1-204ENST00000394830 NAIPQ13075 1403 aa18.66■□□□□ 0.58
PBRM1-204ENST00000394830 RBM19Q9Y4C8 960 aaKnown RBP18.65■□□□□ 0.58
PBRM1-204ENST00000394830 NUP155O75694 1391 aa18.65■□□□□ 0.58
PBRM1-204ENST00000394830 MIA2Q96PC5 1412 aa18.65■□□□□ 0.58
PBRM1-204ENST00000394830 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
PBRM1-204ENST00000394830 JPH4Q96JJ6 628 aa18.64■□□□□ 0.58
PBRM1-204ENST00000394830 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms