RNA–Protein interactions for RNA: ENST00000393400.6

TPRA1-203, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best)

Gene TPRA1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-203ENST00000393400 FHAD1B1AJZ9 1412 aa42.02■■■■■ 4.32
TPRA1-203ENST00000393400 ERCC6Q03468 1493 aa41.97■■■■■ 4.31
TPRA1-203ENST00000393400 GRIN2BQ13224 1484 aa41.95■■■■■ 4.31
TPRA1-203ENST00000393400 THOC2Q8NI27 1593 aaKnown RBP41.94■■■■■ 4.3
TPRA1-203ENST00000393400 ADAMTS12P58397 1594 aa41.92■■■■■ 4.3
TPRA1-203ENST00000393400 AQRO60306 1485 aaKnown RBP eCLIP41.9■■■■■ 4.38e-7■■■■□ 23.8
TPRA1-203ENST00000393400 TIAM1Q13009 1591 aa41.87■■■■■ 4.29
TPRA1-203ENST00000393400 KANK4Q5T7N3 995 aaPredicted RBP41.87■■■■■ 4.29
TPRA1-203ENST00000393400 SAMD9Q5K651 1589 aa41.85■■■■■ 4.29
TPRA1-203ENST00000393400 PCF11O94913 1555 aaKnown RBP41.79■■■■■ 4.28
TPRA1-203ENST00000393400 FHOD3Q2V2M9 1422 aa41.79■■■■■ 4.28
TPRA1-203ENST00000393400 ZNF608Q9ULD9 1512 aaPredicted RBP41.78■■■■■ 4.28
TPRA1-203ENST00000393400 FYCO1Q9BQS8 1478 aa41.78■■■■■ 4.28
TPRA1-203ENST00000393400 CFAP43Q8NDM7 1665 aa41.77■■■■■ 4.28
TPRA1-203ENST00000393400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.76■■■■■ 4.28
TPRA1-203ENST00000393400 CASKIN1Q8WXD9 1431 aa41.74■■■■■ 4.27
TPRA1-203ENST00000393400 RRBP1Q9P2E9 1410 aaKnown RBP41.74■■■■■ 4.27
TPRA1-203ENST00000393400 FMN1Q68DA7 1419 aa41.74■■■■■ 4.27
TPRA1-203ENST00000393400 CCER1Q8TC90 406 aaPredicted RBP41.73■■■■■ 4.27
TPRA1-203ENST00000393400 EIF4G3O43432 1585 aaKnown RBP41.68■■■■■ 4.26
TPRA1-203ENST00000393400 LRRC9Q6ZRR7 1453 aa41.67■■■■■ 4.26
TPRA1-203ENST00000393400 P3H3Q8IVL6 736 aa41.65■■■■■ 4.26
TPRA1-203ENST00000393400 IQGAP2Q13576 1575 aa41.61■■■■■ 4.25
TPRA1-203ENST00000393400 SNAPC4Q5SXM2 1469 aa41.59■■■■■ 4.25
TPRA1-203ENST00000393400 HNRNPUL2Q1KMD3 747 aaKnown RBP41.56■■■■■ 4.24
TPRA1-203ENST00000393400 MAGI1Q96QZ7 1491 aaPredicted RBP41.52■■■■■ 4.24
TPRA1-203ENST00000393400 CCNB3Q8WWL7 1395 aa41.5■■■■■ 4.23
TPRA1-203ENST00000393400 UGGT2Q9NYU1 1516 aa41.47■■■■■ 4.23
TPRA1-203ENST00000393400 GRIN2AQ12879 1464 aa41.44■■■■■ 4.22
TPRA1-203ENST00000393400 KIAA0586Q9BVV6 1533 aa41.42■■■■■ 4.22
TPRA1-203ENST00000393400 SYNJ2O15056 1496 aa41.34■■■■■ 4.21
TPRA1-203ENST00000393400 PHLDB1Q86UU1 1377 aa41.3■■■■■ 4.2
TPRA1-203ENST00000393400 ATP1B4Q9UN42 357 aaPredicted RBP41.29■■■■■ 4.2
TPRA1-203ENST00000393400 LRRIQ1Q96JM4 1722 aa41.28■■■■■ 4.2
TPRA1-203ENST00000393400 CCDC18Q5T9S5 1454 aa41.23■■■■■ 4.19
TPRA1-203ENST00000393400 HECW1Q76N89 1606 aa41.21■■■■■ 4.19
TPRA1-203ENST00000393400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.18■■■■■ 4.182e-6■■■□□ 17.8
TPRA1-203ENST00000393400 KIAA0556O60303 1618 aa41.18■■■■■ 4.18
TPRA1-203ENST00000393400 DISP1Q96F81 1524 aa41.16■■■■■ 4.18
TPRA1-203ENST00000393400 CEP170Q5SW79 1584 aa41.14■■■■■ 4.18
TPRA1-203ENST00000393400 EHBP1L1Q8N3D4 1523 aa41.14■■■■■ 4.18
TPRA1-203ENST00000393400 NUP160Q12769 1436 aa41.13■■■■■ 4.17
TPRA1-203ENST00000393400 MTUS2Q5JR59 1369 aa41.13■■■■■ 4.17
TPRA1-203ENST00000393400 CHMP7Q8WUX9 453 aaPredicted RBP41.13■■■■■ 4.17
TPRA1-203ENST00000393400 CLSPNQ9HAW4 1339 aa41.1■■■■■ 4.17
TPRA1-203ENST00000393400 SUPT6HQ7KZ85 1726 aaKnown RBP41.04■■■■■ 4.16
TPRA1-203ENST00000393400 EPRSP07814 1512 aaKnown RBP41.02■■■■■ 4.16
TPRA1-203ENST00000393400 FGD6Q6ZV73 1430 aa40.99■■■■■ 4.15
TPRA1-203ENST00000393400 ARHGEF11O15085 1522 aa40.99■■■■■ 4.15
TPRA1-203ENST00000393400 DHX57Q6P158 1386 aaKnown RBP40.98■■■■■ 4.15
TPRA1-203ENST00000393400 NCOA2Q15596 1464 aa40.97■■■■■ 4.15
TPRA1-203ENST00000393400 MAGI3Q5TCQ9 1506 aa40.93■■■■■ 4.14
TPRA1-203ENST00000393400 MYOM3Q5VTT5 1437 aa40.9■■■■■ 4.14
TPRA1-203ENST00000393400 FAM50AQ14320 339 aaKnown RBP40.88■■■■■ 4.13
TPRA1-203ENST00000393400 RAPGEF6Q8TEU7 1601 aa40.87■■■■■ 4.13
TPRA1-203ENST00000393400 CARMIL2Q6F5E8 1435 aa40.85■■■■■ 4.13
TPRA1-203ENST00000393400 SETD5Q9C0A6 1442 aa40.85■■■■■ 4.13
TPRA1-203ENST00000393400 ITGAEP38570 1179 aa40.84■■■■■ 4.13
TPRA1-203ENST00000393400 FBLN2P98095 1184 aa40.84■■■■■ 4.13
TPRA1-203ENST00000393400 CDK13Q14004 1512 aaKnown RBP40.82■■■■■ 4.12
TPRA1-203ENST00000393400 RAB3GAP2Q9H2M9 1393 aa40.81■■■■■ 4.12
TPRA1-203ENST00000393400 NUP153P49790 1475 aaKnown RBP40.79■■■■■ 4.12
TPRA1-203ENST00000393400 JPH4Q96JJ6 628 aa40.78■■■■■ 4.12
TPRA1-203ENST00000393400 TCOF1Q13428 1488 aaKnown RBP40.7■■■■■ 4.11
TPRA1-203ENST00000393400 PTPN23Q9H3S7 1636 aa40.7■■■■■ 4.11
TPRA1-203ENST00000393400 MIA2Q96PC5 1412 aa40.66■■■■■ 4.1
TPRA1-203ENST00000393400 CHD1O14646 1710 aa40.62■■■■■ 4.09
TPRA1-203ENST00000393400 CDK11AQ9UQ88 783 aaPredicted RBP40.58■■■■■ 4.09
TPRA1-203ENST00000393400 PLB1Q6P1J6 1458 aa40.57■■■■■ 4.09
TPRA1-203ENST00000393400 ABCA8O94911 1581 aa40.55■■■■■ 4.08
TPRA1-203ENST00000393400 HFM1A2PYH4 1435 aa40.54■■■■■ 4.08
TPRA1-203ENST00000393400 PTPRKQ15262 1439 aa40.52■■■■■ 4.08
TPRA1-203ENST00000393400 MAPKBP1O60336 1514 aa40.5■■■■■ 4.07
TPRA1-203ENST00000393400 TROQ12816 1431 aaPredicted RBP40.49■■■■■ 4.07
TPRA1-203ENST00000393400 SHROOM2Q13796 1616 aa40.48■■■■■ 4.07
TPRA1-203ENST00000393400 ADCY10Q96PN6 1610 aa40.45■■■■■ 4.07
TPRA1-203ENST00000393400 PRG4Q92954 1404 aaPredicted RBP40.45■■■■■ 4.07
TPRA1-203ENST00000393400 ZNF316A6NFI3 1004 aaPredicted RBP40.43■■■■■ 4.06
TPRA1-203ENST00000393400 ARID3CA6NKF2 412 aa40.42■■■■■ 4.06
TPRA1-203ENST00000393400 AKNAQ7Z591 1439 aa40.41■■■■■ 4.06
TPRA1-203ENST00000393400 NAIPQ13075 1403 aa40.37■■■■■ 4.05
TPRA1-203ENST00000393400 PTPRGP23470 1445 aa40.31■■■■■ 4.04
TPRA1-203ENST00000393400 GCC2Q8IWJ2 1684 aa40.3■■■■■ 4.04
TPRA1-203ENST00000393400 ITSN2Q9NZM3 1697 aa40.3■■■■■ 4.04
TPRA1-203ENST00000393400 ATP10BO94823 1461 aa40.28■■■■■ 4.04
TPRA1-203ENST00000393400 UACAQ9BZF9 1416 aa40.27■■■■■ 4.04
TPRA1-203ENST00000393400 DNMT1P26358 1616 aaKnown RBP40.23■■■■■ 4.03
TPRA1-203ENST00000393400 DIEXFQ68CQ4 756 aaKnown RBP40.21■■■■■ 4.03
TPRA1-203ENST00000393400 CLASP1Q7Z460 1538 aa40.21■■■■■ 4.03
TPRA1-203ENST00000393400 KIF14Q15058 1648 aa40.21■■■■■ 4.03
TPRA1-203ENST00000393400 GPATCH8Q9UKJ3 1502 aaKnown RBP40.19■■■■■ 4.02
TPRA1-203ENST00000393400 ROCK1Q13464 1354 aa40.18■■■■■ 4.02
TPRA1-203ENST00000393400 DAPK1P53355 1430 aa40.17■■■■■ 4.02
TPRA1-203ENST00000393400 TIMELESSQ9UNS1 1208 aa40.16■■■■■ 4.02
TPRA1-203ENST00000393400 PLEKHD1A6NEE1 506 aa40.15■■■■■ 4.02
TPRA1-203ENST00000393400 ACIN1Q9UKV3 1341 aaKnown RBP40.12■■■■■ 4.01
TPRA1-203ENST00000393400 ABCC5O15440 1437 aa40.11■■■■■ 4.01
TPRA1-203ENST00000393400 ABCC10Q5T3U5 1492 aa40.11■■■■■ 4.01
TPRA1-203ENST00000393400 CAMSAP2Q08AD1 1489 aa40.07■■■■■ 4.01
TPRA1-203ENST00000393400 CFDP1Q9UEE9 299 aaPredicted RBP40.05■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms