RNA–Protein interactions for RNA: ENST00000393307.5

RAB43-204, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-204ENST00000393307 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■□□□ 13.8
RAB43-204ENST00000393307 CUX1P39880 1505 aa18.49■□□□□ 0.55
RAB43-204ENST00000393307 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
RAB43-204ENST00000393307 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
RAB43-204ENST00000393307 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
RAB43-204ENST00000393307 RRP7BPQ9NSQ0 103 aa18.46■□□□□ 0.55
RAB43-204ENST00000393307 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
RAB43-204ENST00000393307 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
RAB43-204ENST00000393307 TOPBP1Q92547 1522 aa18.41■□□□□ 0.54
RAB43-204ENST00000393307 JPH4Q96JJ6 628 aa18.4■□□□□ 0.54
RAB43-204ENST00000393307 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
RAB43-204ENST00000393307 POLA1P09884 1462 aaPredicted RBP18.38■□□□□ 0.53
RAB43-204ENST00000393307 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
RAB43-204ENST00000393307 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
RAB43-204ENST00000393307 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
RAB43-204ENST00000393307 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
RAB43-204ENST00000393307 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
RAB43-204ENST00000393307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
RAB43-204ENST00000393307 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
RAB43-204ENST00000393307 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
RAB43-204ENST00000393307 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.51
RAB43-204ENST00000393307 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
RAB43-204ENST00000393307 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
RAB43-204ENST00000393307 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
RAB43-204ENST00000393307 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
RAB43-204ENST00000393307 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
RAB43-204ENST00000393307 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
RAB43-204ENST00000393307 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
RAB43-204ENST00000393307 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
RAB43-204ENST00000393307 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
RAB43-204ENST00000393307 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
RAB43-204ENST00000393307 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
RAB43-204ENST00000393307 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
RAB43-204ENST00000393307 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
RAB43-204ENST00000393307 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
RAB43-204ENST00000393307 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
RAB43-204ENST00000393307 KIF21BO75037 1637 aa18.14■□□□□ 0.49
RAB43-204ENST00000393307 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
RAB43-204ENST00000393307 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
RAB43-204ENST00000393307 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
RAB43-204ENST00000393307 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
RAB43-204ENST00000393307 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
RAB43-204ENST00000393307 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
RAB43-204ENST00000393307 PTPRGP23470 1445 aa18.08■□□□□ 0.48
RAB43-204ENST00000393307 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
RAB43-204ENST00000393307 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
RAB43-204ENST00000393307 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
RAB43-204ENST00000393307 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
RAB43-204ENST00000393307 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
RAB43-204ENST00000393307 MIER1Q8N108 512 aa18.04■□□□□ 0.48
RAB43-204ENST00000393307 FOXD1Q16676 465 aa18.03■□□□□ 0.48
RAB43-204ENST00000393307 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
RAB43-204ENST00000393307 HNRNPMP52272 730 aaKnown RBP eCLIP18.02■□□□□ 0.482e-8■■■■□ 20.3
RAB43-204ENST00000393307 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
RAB43-204ENST00000393307 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
RAB43-204ENST00000393307 BIVM-ERCC5R4GMW8 1640 aa17.99■□□□□ 0.47
RAB43-204ENST00000393307 BCANQ96GW7 911 aa17.98■□□□□ 0.47
RAB43-204ENST00000393307 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
RAB43-204ENST00000393307 ZNF644Q9H582 1327 aaPredicted RBP17.97■□□□□ 0.47
RAB43-204ENST00000393307 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.46
RAB43-204ENST00000393307 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
RAB43-204ENST00000393307 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
RAB43-204ENST00000393307 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
RAB43-204ENST00000393307 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
RAB43-204ENST00000393307 ANP32CO43423 234 aa17.91■□□□□ 0.46
RAB43-204ENST00000393307 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
RAB43-204ENST00000393307 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
RAB43-204ENST00000393307 TSHZ2Q9NRE2 1034 aa17.88■□□□□ 0.45
RAB43-204ENST00000393307 CASKIN1Q8WXD9 1431 aa17.87■□□□□ 0.45
RAB43-204ENST00000393307 ANP32EQ9BTT0 268 aa17.87■□□□□ 0.45
RAB43-204ENST00000393307 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
RAB43-204ENST00000393307 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
RAB43-204ENST00000393307 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
RAB43-204ENST00000393307 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
RAB43-204ENST00000393307 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
RAB43-204ENST00000393307 PKD2Q13563 968 aa17.84■□□□□ 0.45
RAB43-204ENST00000393307 MLECQ14165 292 aa17.84■□□□□ 0.45
RAB43-204ENST00000393307 GGT6Q6P531 493 aa17.84■□□□□ 0.45
RAB43-204ENST00000393307 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
RAB43-204ENST00000393307 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
RAB43-204ENST00000393307 NEFLP07196 543 aa17.81■□□□□ 0.44
RAB43-204ENST00000393307 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
RAB43-204ENST00000393307 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
RAB43-204ENST00000393307 NUP155O75694 1391 aa17.78■□□□□ 0.44
RAB43-204ENST00000393307 FGD6Q6ZV73 1430 aa17.77■□□□□ 0.44
RAB43-204ENST00000393307 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.43
RAB43-204ENST00000393307 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
RAB43-204ENST00000393307 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
RAB43-204ENST00000393307 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
RAB43-204ENST00000393307 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
RAB43-204ENST00000393307 KIF3BO15066 747 aa17.75■□□□□ 0.43
RAB43-204ENST00000393307 EFCAB5A4FU69 1503 aa17.74■□□□□ 0.43
RAB43-204ENST00000393307 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
RAB43-204ENST00000393307 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
RAB43-204ENST00000393307 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
RAB43-204ENST00000393307 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
RAB43-204ENST00000393307 DHX57Q6P158 1386 aaKnown RBP17.74■□□□□ 0.43
RAB43-204ENST00000393307 CUL7Q14999 1698 aa17.73■□□□□ 0.43
RAB43-204ENST00000393307 PLB1Q6P1J6 1458 aa17.73■□□□□ 0.43
RAB43-204ENST00000393307 MAGI1Q96QZ7 1491 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms