RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
BRF1-204ENST00000392557 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
BRF1-204ENST00000392557 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
BRF1-204ENST00000392557 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
BRF1-204ENST00000392557 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
BRF1-204ENST00000392557 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
BRF1-204ENST00000392557 FHOD3Q2V2M9 1422 aa15.84■□□□□ 0.13
BRF1-204ENST00000392557 GAPVD1Q14C86 1478 aa15.81■□□□□ 0.12
BRF1-204ENST00000392557 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
BRF1-204ENST00000392557 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.114e-7■■■■■ 29.9
BRF1-204ENST00000392557 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
BRF1-204ENST00000392557 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
BRF1-204ENST00000392557 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
BRF1-204ENST00000392557 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
BRF1-204ENST00000392557 CUL7Q14999 1698 aa15.71■□□□□ 0.11
BRF1-204ENST00000392557 FBLN2P98095 1184 aa15.7■□□□□ 0.1
BRF1-204ENST00000392557 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
BRF1-204ENST00000392557 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
BRF1-204ENST00000392557 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
BRF1-204ENST00000392557 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
BRF1-204ENST00000392557 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
BRF1-204ENST00000392557 PHLDB1Q86UU1 1377 aa15.65■□□□□ 0.1
BRF1-204ENST00000392557 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
BRF1-204ENST00000392557 RRBP1Q9P2E9 1410 aaKnown RBP15.65■□□□□ 0.1
BRF1-204ENST00000392557 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
BRF1-204ENST00000392557 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
BRF1-204ENST00000392557 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
BRF1-204ENST00000392557 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
BRF1-204ENST00000392557 FMN1Q68DA7 1419 aa15.61■□□□□ 0.09
BRF1-204ENST00000392557 EFCAB5A4FU69 1503 aa15.6■□□□□ 0.09
BRF1-204ENST00000392557 DHX57Q6P158 1386 aaKnown RBP15.59■□□□□ 0.09
BRF1-204ENST00000392557 CASKIN1Q8WXD9 1431 aa15.59■□□□□ 0.09
BRF1-204ENST00000392557 BCANQ96GW7 911 aa15.58■□□□□ 0.08
BRF1-204ENST00000392557 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
BRF1-204ENST00000392557 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
BRF1-204ENST00000392557 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
BRF1-204ENST00000392557 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
BRF1-204ENST00000392557 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
BRF1-204ENST00000392557 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
BRF1-204ENST00000392557 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
BRF1-204ENST00000392557 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
BRF1-204ENST00000392557 SUPT16HQ9Y5B9 1047 aaKnown RBP15.52■□□□□ 0.07
BRF1-204ENST00000392557 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
BRF1-204ENST00000392557 CFAP43Q8NDM7 1665 aa15.49■□□□□ 0.07
BRF1-204ENST00000392557 CHIC2Q9UKJ5 165 aa15.48■□□□□ 0.07
BRF1-204ENST00000392557 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
BRF1-204ENST00000392557 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
BRF1-204ENST00000392557 WDR62O43379 1518 aa15.48■□□□□ 0.07
BRF1-204ENST00000392557 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
BRF1-204ENST00000392557 SAMD9Q5K651 1589 aa15.46■□□□□ 0.07
BRF1-204ENST00000392557 SIN3AQ96ST3 1273 aa15.46■□□□□ 0.06
BRF1-204ENST00000392557 CNGB1Q14028 1251 aaPredicted RBP15.45■□□□□ 0.06
BRF1-204ENST00000392557 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
BRF1-204ENST00000392557 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
BRF1-204ENST00000392557 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
BRF1-204ENST00000392557 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
BRF1-204ENST00000392557 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
BRF1-204ENST00000392557 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
BRF1-204ENST00000392557 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
BRF1-204ENST00000392557 CDK13Q14004 1512 aaKnown RBP15.41■□□□□ 0.06
BRF1-204ENST00000392557 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
BRF1-204ENST00000392557 NEFLP07196 543 aa15.39■□□□□ 0.05
BRF1-204ENST00000392557 FKBP8Q14318 412 aa15.38■□□□□ 0.05
BRF1-204ENST00000392557 LRRIQ1Q96JM4 1722 aa15.37■□□□□ 0.05
BRF1-204ENST00000392557 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
BRF1-204ENST00000392557 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
BRF1-204ENST00000392557 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
BRF1-204ENST00000392557 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
BRF1-204ENST00000392557 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
BRF1-204ENST00000392557 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
BRF1-204ENST00000392557 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
BRF1-204ENST00000392557 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
BRF1-204ENST00000392557 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.05
BRF1-204ENST00000392557 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
BRF1-204ENST00000392557 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.04
BRF1-204ENST00000392557 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
BRF1-204ENST00000392557 SLC24A1O60721 1099 aa15.33■□□□□ 0.04
BRF1-204ENST00000392557 SUPT6HQ7KZ85 1726 aaKnown RBP15.33■□□□□ 0.04
BRF1-204ENST00000392557 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.04
BRF1-204ENST00000392557 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
BRF1-204ENST00000392557 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
BRF1-204ENST00000392557 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
BRF1-204ENST00000392557 MAPKBP1O60336 1514 aa15.3■□□□□ 0.04
BRF1-204ENST00000392557 DISP1Q96F81 1524 aa15.3■□□□□ 0.04
BRF1-204ENST00000392557 UGGT2Q9NYU1 1516 aa15.3■□□□□ 0.04
BRF1-204ENST00000392557 ZNF644Q9H582 1327 aaPredicted RBP15.29■□□□□ 0.04
BRF1-204ENST00000392557 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
BRF1-204ENST00000392557 PLB1Q6P1J6 1458 aa15.27■□□□□ 0.03
BRF1-204ENST00000392557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.033e-6■■■■■ 37.9
BRF1-204ENST00000392557 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
BRF1-204ENST00000392557 PTPN23Q9H3S7 1636 aa15.26■□□□□ 0.03
BRF1-204ENST00000392557 ANP32CO43423 234 aa15.26■□□□□ 0.03
BRF1-204ENST00000392557 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
BRF1-204ENST00000392557 NUP153P49790 1475 aaKnown RBP15.24■□□□□ 0.03
BRF1-204ENST00000392557 CFDP1Q9UEE9 299 aaPredicted RBP15.24■□□□□ 0.03
BRF1-204ENST00000392557 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
BRF1-204ENST00000392557 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
BRF1-204ENST00000392557 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
BRF1-204ENST00000392557 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
BRF1-204ENST00000392557 FOXD1Q16676 465 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms