RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
ERCC2-204ENST00000391945 FHOD3Q2V2M9 1422 aa18.33■□□□□ 0.52
ERCC2-204ENST00000391945 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
ERCC2-204ENST00000391945 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
ERCC2-204ENST00000391945 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
ERCC2-204ENST00000391945 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.51
ERCC2-204ENST00000391945 PLEKHD1A6NEE1 506 aa18.26■□□□□ 0.51
ERCC2-204ENST00000391945 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
ERCC2-204ENST00000391945 AQRO60306 1485 aaKnown RBP eCLIP18.24■□□□□ 0.519e-8■■■■■ 42.5
ERCC2-204ENST00000391945 TOPBP1Q92547 1522 aa18.21■□□□□ 0.51
ERCC2-204ENST00000391945 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
ERCC2-204ENST00000391945 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
ERCC2-204ENST00000391945 CFDP1Q9UEE9 299 aaPredicted RBP18.19■□□□□ 0.5
ERCC2-204ENST00000391945 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
ERCC2-204ENST00000391945 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
ERCC2-204ENST00000391945 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
ERCC2-204ENST00000391945 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
ERCC2-204ENST00000391945 KIF21BO75037 1637 aa18.16■□□□□ 0.5
ERCC2-204ENST00000391945 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
ERCC2-204ENST00000391945 NPM1P06748 294 aaKnown RBP eCLIP18.15■□□□□ 0.5
ERCC2-204ENST00000391945 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
ERCC2-204ENST00000391945 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
ERCC2-204ENST00000391945 SIN3AQ96ST3 1273 aa18.13■□□□□ 0.49
ERCC2-204ENST00000391945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■□□□ 13.1
ERCC2-204ENST00000391945 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
ERCC2-204ENST00000391945 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
ERCC2-204ENST00000391945 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.48
ERCC2-204ENST00000391945 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
ERCC2-204ENST00000391945 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
ERCC2-204ENST00000391945 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
ERCC2-204ENST00000391945 DDX10Q13206 875 aaKnown RBP18.05■□□□□ 0.48
ERCC2-204ENST00000391945 MYT1Q01538 1121 aa18.05■□□□□ 0.48
ERCC2-204ENST00000391945 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
ERCC2-204ENST00000391945 CARMIL2Q6F5E8 1435 aa18.03■□□□□ 0.48
ERCC2-204ENST00000391945 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
ERCC2-204ENST00000391945 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
ERCC2-204ENST00000391945 MIER1Q8N108 512 aa18.01■□□□□ 0.47
ERCC2-204ENST00000391945 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
ERCC2-204ENST00000391945 ANP32CO43423 234 aa17.99■□□□□ 0.47
ERCC2-204ENST00000391945 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
ERCC2-204ENST00000391945 NEFLP07196 543 aa17.98■□□□□ 0.47
ERCC2-204ENST00000391945 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
ERCC2-204ENST00000391945 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
ERCC2-204ENST00000391945 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
ERCC2-204ENST00000391945 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
ERCC2-204ENST00000391945 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
ERCC2-204ENST00000391945 FOXD1Q16676 465 aa17.92■□□□□ 0.46
ERCC2-204ENST00000391945 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
ERCC2-204ENST00000391945 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
ERCC2-204ENST00000391945 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
ERCC2-204ENST00000391945 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
ERCC2-204ENST00000391945 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
ERCC2-204ENST00000391945 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
ERCC2-204ENST00000391945 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
ERCC2-204ENST00000391945 PTPRGP23470 1445 aa17.83■□□□□ 0.45
ERCC2-204ENST00000391945 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.44
ERCC2-204ENST00000391945 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.44
ERCC2-204ENST00000391945 BCANQ96GW7 911 aa17.83■□□□□ 0.44
ERCC2-204ENST00000391945 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
ERCC2-204ENST00000391945 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.442e-7■■■■□ 22.5
ERCC2-204ENST00000391945 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
ERCC2-204ENST00000391945 CCDC18Q5T9S5 1454 aa17.8■□□□□ 0.44
ERCC2-204ENST00000391945 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.444e-6■■■□□ 16
ERCC2-204ENST00000391945 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.43
ERCC2-204ENST00000391945 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
ERCC2-204ENST00000391945 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
ERCC2-204ENST00000391945 PLPPR3Q6T4P5 718 aa17.74■□□□□ 0.43
ERCC2-204ENST00000391945 PKD2Q13563 968 aa17.73■□□□□ 0.43
ERCC2-204ENST00000391945 FYCO1Q9BQS8 1478 aa17.73■□□□□ 0.43
ERCC2-204ENST00000391945 EFCAB5A4FU69 1503 aa17.71■□□□□ 0.43
ERCC2-204ENST00000391945 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
ERCC2-204ENST00000391945 NCOA2Q15596 1464 aa17.71■□□□□ 0.42
ERCC2-204ENST00000391945 MYOM3Q5VTT5 1437 aa17.7■□□□□ 0.42
ERCC2-204ENST00000391945 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
ERCC2-204ENST00000391945 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
ERCC2-204ENST00000391945 TIAM1Q13009 1591 aa17.68■□□□□ 0.42
ERCC2-204ENST00000391945 PRG4Q92954 1404 aaPredicted RBP17.67■□□□□ 0.42
ERCC2-204ENST00000391945 ESF1Q9H501 851 aaKnown RBP17.67■□□□□ 0.42
ERCC2-204ENST00000391945 NUP155O75694 1391 aa17.66■□□□□ 0.42
ERCC2-204ENST00000391945 CUL7Q14999 1698 aa17.66■□□□□ 0.42
ERCC2-204ENST00000391945 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
ERCC2-204ENST00000391945 ANKRD30AQ9BXX3 1397 aa17.66■□□□□ 0.42
ERCC2-204ENST00000391945 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
ERCC2-204ENST00000391945 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
ERCC2-204ENST00000391945 FAM9BQ8IZU0 186 aa17.65■□□□□ 0.42
ERCC2-204ENST00000391945 KIAA0586Q9BVV6 1533 aa17.65■□□□□ 0.42
ERCC2-204ENST00000391945 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
ERCC2-204ENST00000391945 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
ERCC2-204ENST00000391945 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
ERCC2-204ENST00000391945 CARD11Q9BXL7 1154 aa17.62■□□□□ 0.41
ERCC2-204ENST00000391945 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
ERCC2-204ENST00000391945 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
ERCC2-204ENST00000391945 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
ERCC2-204ENST00000391945 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
ERCC2-204ENST00000391945 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
ERCC2-204ENST00000391945 CDK13Q14004 1512 aaKnown RBP17.61■□□□□ 0.41
ERCC2-204ENST00000391945 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
ERCC2-204ENST00000391945 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
ERCC2-204ENST00000391945 GGT6Q6P531 493 aa17.57■□□□□ 0.4
ERCC2-204ENST00000391945 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms