RNA–Protein interactions for RNA: ENST00000390652.9

BCAS3-201, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-201ENST00000390652 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
BCAS3-201ENST00000390652 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
BCAS3-201ENST00000390652 RRP7BPQ9NSQ0 103 aa15.97■□□□□ 0.15
BCAS3-201ENST00000390652 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
BCAS3-201ENST00000390652 MTUS2Q5JR59 1369 aa15.95■□□□□ 0.14
BCAS3-201ENST00000390652 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
BCAS3-201ENST00000390652 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
BCAS3-201ENST00000390652 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
BCAS3-201ENST00000390652 ARHGAP35Q9NRY4 1499 aa15.9■□□□□ 0.14
BCAS3-201ENST00000390652 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.13
BCAS3-201ENST00000390652 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
BCAS3-201ENST00000390652 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
BCAS3-201ENST00000390652 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.13
BCAS3-201ENST00000390652 POLA1P09884 1462 aaPredicted RBP15.85■□□□□ 0.13
BCAS3-201ENST00000390652 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
BCAS3-201ENST00000390652 FOXD1Q16676 465 aa15.82■□□□□ 0.12
BCAS3-201ENST00000390652 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
BCAS3-201ENST00000390652 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
BCAS3-201ENST00000390652 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
BCAS3-201ENST00000390652 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
BCAS3-201ENST00000390652 DHX57Q6P158 1386 aaKnown RBP15.79■□□□□ 0.12
BCAS3-201ENST00000390652 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
BCAS3-201ENST00000390652 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
BCAS3-201ENST00000390652 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
BCAS3-201ENST00000390652 ERICH3Q5RHP9 1530 aa15.74■□□□□ 0.11
BCAS3-201ENST00000390652 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
BCAS3-201ENST00000390652 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
BCAS3-201ENST00000390652 BCANQ96GW7 911 aa15.71■□□□□ 0.11
BCAS3-201ENST00000390652 KCNH8Q96L42 1107 aa15.71■□□□□ 0.11
BCAS3-201ENST00000390652 SENP3-EIF4A1A0A087X0R7 540 aa15.71■□□□□ 0.11
BCAS3-201ENST00000390652 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
BCAS3-201ENST00000390652 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
BCAS3-201ENST00000390652 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
BCAS3-201ENST00000390652 LRRC9Q6ZRR7 1453 aa15.64■□□□□ 0.09
BCAS3-201ENST00000390652 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
BCAS3-201ENST00000390652 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
BCAS3-201ENST00000390652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
BCAS3-201ENST00000390652 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
BCAS3-201ENST00000390652 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
BCAS3-201ENST00000390652 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
BCAS3-201ENST00000390652 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
BCAS3-201ENST00000390652 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
BCAS3-201ENST00000390652 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.08
BCAS3-201ENST00000390652 JPH4Q96JJ6 628 aa15.56■□□□□ 0.08
BCAS3-201ENST00000390652 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
BCAS3-201ENST00000390652 ANP32CO43423 234 aa15.55■□□□□ 0.08
BCAS3-201ENST00000390652 PCF11O94913 1555 aaKnown RBP15.55■□□□□ 0.08
BCAS3-201ENST00000390652 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
BCAS3-201ENST00000390652 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
BCAS3-201ENST00000390652 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
BCAS3-201ENST00000390652 CLSPNQ9HAW4 1339 aa15.49■□□□□ 0.07
BCAS3-201ENST00000390652 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
BCAS3-201ENST00000390652 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
BCAS3-201ENST00000390652 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
BCAS3-201ENST00000390652 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
BCAS3-201ENST00000390652 PPP1R15AO75807 674 aaPredicted RBP15.48■□□□□ 0.07
BCAS3-201ENST00000390652 CDK13Q14004 1512 aaKnown RBP15.47■□□□□ 0.07
BCAS3-201ENST00000390652 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
BCAS3-201ENST00000390652 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■■■□ 24.7
BCAS3-201ENST00000390652 NCOA2Q15596 1464 aa15.46■□□□□ 0.07
BCAS3-201ENST00000390652 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
BCAS3-201ENST00000390652 TSPY4P0CV99 314 aa15.45■□□□□ 0.06
BCAS3-201ENST00000390652 TSPY10P0CW01 314 aa15.45■□□□□ 0.06
BCAS3-201ENST00000390652 FAM9BQ8IZU0 186 aa15.44■□□□□ 0.06
BCAS3-201ENST00000390652 IRX6P78412 446 aaPredicted RBP15.43■□□□□ 0.06
BCAS3-201ENST00000390652 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
BCAS3-201ENST00000390652 BCL11AQ9H165 835 aa15.43■□□□□ 0.06
BCAS3-201ENST00000390652 SNAPC4Q5SXM2 1469 aa15.43■□□□□ 0.06
BCAS3-201ENST00000390652 L3MBTL2Q969R5 705 aa15.42■□□□□ 0.06
BCAS3-201ENST00000390652 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
BCAS3-201ENST00000390652 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
BCAS3-201ENST00000390652 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
BCAS3-201ENST00000390652 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
BCAS3-201ENST00000390652 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
BCAS3-201ENST00000390652 NEFLP07196 543 aa15.4■□□□□ 0.06
BCAS3-201ENST00000390652 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
BCAS3-201ENST00000390652 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
BCAS3-201ENST00000390652 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
BCAS3-201ENST00000390652 PKD2Q13563 968 aa15.38■□□□□ 0.05
BCAS3-201ENST00000390652 FKBP8Q14318 412 aa15.38■□□□□ 0.05
BCAS3-201ENST00000390652 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
BCAS3-201ENST00000390652 SALL2Q9Y467 1007 aaPredicted RBP15.37■□□□□ 0.05
BCAS3-201ENST00000390652 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
BCAS3-201ENST00000390652 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
BCAS3-201ENST00000390652 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.05
BCAS3-201ENST00000390652 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
BCAS3-201ENST00000390652 EPRSP07814 1512 aaKnown RBP15.29■□□□□ 0.04
BCAS3-201ENST00000390652 CUL7Q14999 1698 aa15.29■□□□□ 0.04
BCAS3-201ENST00000390652 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
BCAS3-201ENST00000390652 DCAF11Q8TEB1 546 aa15.29■□□□□ 0.04
BCAS3-201ENST00000390652 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
BCAS3-201ENST00000390652 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
BCAS3-201ENST00000390652 NAIPQ13075 1403 aa15.28■□□□□ 0.04
BCAS3-201ENST00000390652 MAPKBP1O60336 1514 aa15.27■□□□□ 0.04
BCAS3-201ENST00000390652 IQGAP2Q13576 1575 aa15.27■□□□□ 0.04
BCAS3-201ENST00000390652 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.04
BCAS3-201ENST00000390652 MRS2Q9HD23 443 aa15.27■□□□□ 0.04
BCAS3-201ENST00000390652 NUP155O75694 1391 aa15.27■□□□□ 0.03
BCAS3-201ENST00000390652 PTPRGP23470 1445 aa15.25■□□□□ 0.03
BCAS3-201ENST00000390652 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms