RNA–Protein interactions for RNA: ENST00000390652.9

BCAS3-201, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-201ENST00000390652 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
BCAS3-201ENST00000390652 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
BCAS3-201ENST00000390652 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.79
BCAS3-201ENST00000390652 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
BCAS3-201ENST00000390652 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
BCAS3-201ENST00000390652 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
BCAS3-201ENST00000390652 ABCC9O60706 1549 aa18.49■□□□□ 0.55
BCAS3-201ENST00000390652 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
BCAS3-201ENST00000390652 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
BCAS3-201ENST00000390652 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
BCAS3-201ENST00000390652 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
BCAS3-201ENST00000390652 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
BCAS3-201ENST00000390652 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
BCAS3-201ENST00000390652 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
BCAS3-201ENST00000390652 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
BCAS3-201ENST00000390652 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
BCAS3-201ENST00000390652 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
BCAS3-201ENST00000390652 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
BCAS3-201ENST00000390652 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
BCAS3-201ENST00000390652 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
BCAS3-201ENST00000390652 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
BCAS3-201ENST00000390652 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
BCAS3-201ENST00000390652 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
BCAS3-201ENST00000390652 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
BCAS3-201ENST00000390652 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
BCAS3-201ENST00000390652 NACADO15069 1562 aa17.38■□□□□ 0.37
BCAS3-201ENST00000390652 HRCP23327 699 aa17.35■□□□□ 0.37
BCAS3-201ENST00000390652 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
BCAS3-201ENST00000390652 WIZO95785 1651 aa17.25■□□□□ 0.35
BCAS3-201ENST00000390652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
BCAS3-201ENST00000390652 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
BCAS3-201ENST00000390652 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
BCAS3-201ENST00000390652 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.32
BCAS3-201ENST00000390652 APLP2Q06481 763 aa17.01■□□□□ 0.31
BCAS3-201ENST00000390652 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
BCAS3-201ENST00000390652 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
BCAS3-201ENST00000390652 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
BCAS3-201ENST00000390652 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
BCAS3-201ENST00000390652 SOGA1O94964 1423 aa16.95■□□□□ 0.3
BCAS3-201ENST00000390652 ITGAEP38570 1179 aa16.87■□□□□ 0.29
BCAS3-201ENST00000390652 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
BCAS3-201ENST00000390652 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
BCAS3-201ENST00000390652 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
BCAS3-201ENST00000390652 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
BCAS3-201ENST00000390652 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
BCAS3-201ENST00000390652 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
BCAS3-201ENST00000390652 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
BCAS3-201ENST00000390652 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
BCAS3-201ENST00000390652 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
BCAS3-201ENST00000390652 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
BCAS3-201ENST00000390652 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
BCAS3-201ENST00000390652 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
BCAS3-201ENST00000390652 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
BCAS3-201ENST00000390652 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
BCAS3-201ENST00000390652 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
BCAS3-201ENST00000390652 CLIP1P30622 1438 aa16.52■□□□□ 0.23
BCAS3-201ENST00000390652 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
BCAS3-201ENST00000390652 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
BCAS3-201ENST00000390652 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
BCAS3-201ENST00000390652 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
BCAS3-201ENST00000390652 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
BCAS3-201ENST00000390652 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
BCAS3-201ENST00000390652 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
BCAS3-201ENST00000390652 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
BCAS3-201ENST00000390652 MYT1Q01538 1121 aa16.38■□□□□ 0.21
BCAS3-201ENST00000390652 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
BCAS3-201ENST00000390652 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
BCAS3-201ENST00000390652 EEA1Q15075 1411 aa16.35■□□□□ 0.21
BCAS3-201ENST00000390652 FBLN2P98095 1184 aa16.35■□□□□ 0.21
BCAS3-201ENST00000390652 CUX2O14529 1486 aa16.31■□□□□ 0.2
BCAS3-201ENST00000390652 NEUROD1Q13562 356 aa16.3■□□□□ 0.2
BCAS3-201ENST00000390652 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
BCAS3-201ENST00000390652 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
BCAS3-201ENST00000390652 NCAPD3P42695 1498 aa16.23■□□□□ 0.19
BCAS3-201ENST00000390652 NESP48681 1621 aa16.22■□□□□ 0.19
BCAS3-201ENST00000390652 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
BCAS3-201ENST00000390652 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
BCAS3-201ENST00000390652 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
BCAS3-201ENST00000390652 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
BCAS3-201ENST00000390652 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
BCAS3-201ENST00000390652 HIRIP3Q9BW71 556 aaPredicted RBP16.14■□□□□ 0.17
BCAS3-201ENST00000390652 CUX1P39880 1505 aa16.14■□□□□ 0.17
BCAS3-201ENST00000390652 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
BCAS3-201ENST00000390652 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
BCAS3-201ENST00000390652 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
BCAS3-201ENST00000390652 PEG3Q9GZU2 1588 aa16.1■□□□□ 0.17
BCAS3-201ENST00000390652 IGF1RP08069 1367 aa16.09■□□□□ 0.17
BCAS3-201ENST00000390652 CFTRP13569 1480 aa16.09■□□□□ 0.17
BCAS3-201ENST00000390652 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
BCAS3-201ENST00000390652 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
BCAS3-201ENST00000390652 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
BCAS3-201ENST00000390652 MIER1Q8N108 512 aa16.05■□□□□ 0.16
BCAS3-201ENST00000390652 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
BCAS3-201ENST00000390652 KIF21BO75037 1637 aa16.03■□□□□ 0.16
BCAS3-201ENST00000390652 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
BCAS3-201ENST00000390652 ARAP1Q96P48 1450 aa16.02■□□□□ 0.16
BCAS3-201ENST00000390652 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
BCAS3-201ENST00000390652 FHOD3Q2V2M9 1422 aa16.02■□□□□ 0.16
BCAS3-201ENST00000390652 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
BCAS3-201ENST00000390652 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms