RNA–Protein interactions for RNA: ENST00000389879.9

CCNK-201, Transcript of cyclin K, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCNK, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-201ENST00000389879 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
CCNK-201ENST00000389879 CFAP43Q8NDM7 1665 aa13.22□□□□□ -0.29
CCNK-201ENST00000389879 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
CCNK-201ENST00000389879 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
CCNK-201ENST00000389879 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
CCNK-201ENST00000389879 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
CCNK-201ENST00000389879 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
CCNK-201ENST00000389879 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
CCNK-201ENST00000389879 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
CCNK-201ENST00000389879 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■■■□ 24.7
CCNK-201ENST00000389879 ATP1B4Q9UN42 357 aaPredicted RBP13.17□□□□□ -0.3
CCNK-201ENST00000389879 IGF1RP08069 1367 aa13.16□□□□□ -0.3
CCNK-201ENST00000389879 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
CCNK-201ENST00000389879 RRBP1Q9P2E9 1410 aaKnown RBP13.16□□□□□ -0.3
CCNK-201ENST00000389879 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
CCNK-201ENST00000389879 SAMD9Q5K651 1589 aa13.13□□□□□ -0.31
CCNK-201ENST00000389879 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
CCNK-201ENST00000389879 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
CCNK-201ENST00000389879 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
CCNK-201ENST00000389879 FKBP8Q14318 412 aa13.12□□□□□ -0.31
CCNK-201ENST00000389879 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
CCNK-201ENST00000389879 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
CCNK-201ENST00000389879 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
CCNK-201ENST00000389879 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
CCNK-201ENST00000389879 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.32
CCNK-201ENST00000389879 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
CCNK-201ENST00000389879 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
CCNK-201ENST00000389879 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
CCNK-201ENST00000389879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCNK-201ENST00000389879 PBRM1Q86U86 1689 aa13.04□□□□□ -0.32
CCNK-201ENST00000389879 SENP3-EIF4A1A0A087X0R7 540 aa13.03□□□□□ -0.32
CCNK-201ENST00000389879 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.32
CCNK-201ENST00000389879 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
CCNK-201ENST00000389879 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
CCNK-201ENST00000389879 WDR62O43379 1518 aa12.99□□□□□ -0.33
CCNK-201ENST00000389879 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
CCNK-201ENST00000389879 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
CCNK-201ENST00000389879 ANP32EQ9BTT0 268 aa12.97□□□□□ -0.33
CCNK-201ENST00000389879 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
CCNK-201ENST00000389879 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
CCNK-201ENST00000389879 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
CCNK-201ENST00000389879 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.33
CCNK-201ENST00000389879 ADAMTS12P58397 1594 aa12.96□□□□□ -0.34
CCNK-201ENST00000389879 NEFLP07196 543 aa12.96□□□□□ -0.34
CCNK-201ENST00000389879 NESP48681 1621 aa12.96□□□□□ -0.34
CCNK-201ENST00000389879 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
CCNK-201ENST00000389879 SIN3AQ96ST3 1273 aa12.95□□□□□ -0.34
CCNK-201ENST00000389879 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
CCNK-201ENST00000389879 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
CCNK-201ENST00000389879 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
CCNK-201ENST00000389879 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
CCNK-201ENST00000389879 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
CCNK-201ENST00000389879 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
CCNK-201ENST00000389879 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
CCNK-201ENST00000389879 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
CCNK-201ENST00000389879 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
CCNK-201ENST00000389879 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
CCNK-201ENST00000389879 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
CCNK-201ENST00000389879 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
CCNK-201ENST00000389879 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
CCNK-201ENST00000389879 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
CCNK-201ENST00000389879 DHX57Q6P158 1386 aaKnown RBP12.82□□□□□ -0.36
CCNK-201ENST00000389879 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
CCNK-201ENST00000389879 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
CCNK-201ENST00000389879 HECW1Q76N89 1606 aa12.81□□□□□ -0.36
CCNK-201ENST00000389879 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
CCNK-201ENST00000389879 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
CCNK-201ENST00000389879 GCC2Q8IWJ2 1684 aa12.79□□□□□ -0.36
CCNK-201ENST00000389879 AKNAQ7Z591 1439 aa12.78□□□□□ -0.36
CCNK-201ENST00000389879 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
CCNK-201ENST00000389879 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
CCNK-201ENST00000389879 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCNK-201ENST00000389879 NBR1Q14596 966 aa12.76□□□□□ -0.37
CCNK-201ENST00000389879 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
CCNK-201ENST00000389879 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
CCNK-201ENST00000389879 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
CCNK-201ENST00000389879 ANP32CO43423 234 aa12.74□□□□□ -0.37
CCNK-201ENST00000389879 MAGI1Q96QZ7 1491 aaPredicted RBP12.73□□□□□ -0.37
CCNK-201ENST00000389879 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
CCNK-201ENST00000389879 PHLDB1Q86UU1 1377 aa12.72□□□□□ -0.37
CCNK-201ENST00000389879 KIAA0586Q9BVV6 1533 aa12.71□□□□□ -0.38
CCNK-201ENST00000389879 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
CCNK-201ENST00000389879 FGD6Q6ZV73 1430 aa12.69□□□□□ -0.38
CCNK-201ENST00000389879 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
CCNK-201ENST00000389879 MSH5O43196 834 aa12.69□□□□□ -0.38
CCNK-201ENST00000389879 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
CCNK-201ENST00000389879 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
CCNK-201ENST00000389879 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
CCNK-201ENST00000389879 MAGI3Q5TCQ9 1506 aa12.68□□□□□ -0.38
CCNK-201ENST00000389879 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
CCNK-201ENST00000389879 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
CCNK-201ENST00000389879 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
CCNK-201ENST00000389879 B4GALNT3Q6L9W6 998 aa12.66□□□□□ -0.38
CCNK-201ENST00000389879 MYOM3Q5VTT5 1437 aa12.66□□□□□ -0.38
CCNK-201ENST00000389879 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
CCNK-201ENST00000389879 RAPGEF6Q8TEU7 1601 aa12.64□□□□□ -0.39
CCNK-201ENST00000389879 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
CCNK-201ENST00000389879 NCOA2Q15596 1464 aa12.64□□□□□ -0.39
CCNK-201ENST00000389879 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
CCNK-201ENST00000389879 NUP160Q12769 1436 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms