RNA–Protein interactions for RNA: ENST00000382538.10

TSC2-203, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-203ENST00000382538 NCAPD3P42695 1498 aa20■□□□□ 0.79
TSC2-203ENST00000382538 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.99■□□□□ 0.79
TSC2-203ENST00000382538 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
TSC2-203ENST00000382538 UPF2Q9HAU5 1272 aaKnown RBP19.96■□□□□ 0.79
TSC2-203ENST00000382538 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
TSC2-203ENST00000382538 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
TSC2-203ENST00000382538 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
TSC2-203ENST00000382538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.9■□□□□ 0.783e-6■■■□□ 15.2
TSC2-203ENST00000382538 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
TSC2-203ENST00000382538 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
TSC2-203ENST00000382538 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
TSC2-203ENST00000382538 CHIC2Q9UKJ5 165 aa19.86■□□□□ 0.77
TSC2-203ENST00000382538 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
TSC2-203ENST00000382538 ANP32BQ92688 251 aaKnown RBP19.84■□□□□ 0.77
TSC2-203ENST00000382538 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
TSC2-203ENST00000382538 A0A0G2JS52 829 aa19.81■□□□□ 0.76
TSC2-203ENST00000382538 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
TSC2-203ENST00000382538 HNRNPUQ00839 825 aaKnown RBP eCLIP19.81■□□□□ 0.76
TSC2-203ENST00000382538 HSP90AA1P07900 732 aaKnown RBP19.79■□□□□ 0.76
TSC2-203ENST00000382538 CUX2O14529 1486 aa19.79■□□□□ 0.76
TSC2-203ENST00000382538 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
TSC2-203ENST00000382538 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
TSC2-203ENST00000382538 NPM2Q86SE8 214 aaKnown RBP19.76■□□□□ 0.75
TSC2-203ENST00000382538 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
TSC2-203ENST00000382538 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
TSC2-203ENST00000382538 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
TSC2-203ENST00000382538 FKBP8Q14318 412 aa19.7■□□□□ 0.74
TSC2-203ENST00000382538 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
TSC2-203ENST00000382538 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
TSC2-203ENST00000382538 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
TSC2-203ENST00000382538 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
TSC2-203ENST00000382538 KDM2AQ9Y2K7 1162 aa19.69■□□□□ 0.74
TSC2-203ENST00000382538 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
TSC2-203ENST00000382538 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
TSC2-203ENST00000382538 CFTRP13569 1480 aa19.67■□□□□ 0.74
TSC2-203ENST00000382538 CFAP53Q96M91 514 aa19.67■□□□□ 0.74
TSC2-203ENST00000382538 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
TSC2-203ENST00000382538 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
TSC2-203ENST00000382538 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
TSC2-203ENST00000382538 FANCD2Q9BXW9 1451 aa19.65■□□□□ 0.74
TSC2-203ENST00000382538 KIF21BO75037 1637 aa19.65■□□□□ 0.74
TSC2-203ENST00000382538 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
TSC2-203ENST00000382538 FHAD1B1AJZ9 1412 aa19.63■□□□□ 0.73
TSC2-203ENST00000382538 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
TSC2-203ENST00000382538 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
TSC2-203ENST00000382538 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
TSC2-203ENST00000382538 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
TSC2-203ENST00000382538 RRP7BPQ9NSQ0 103 aa19.6■□□□□ 0.73
TSC2-203ENST00000382538 HAP1P54257 671 aaPredicted RBP19.59■□□□□ 0.73
TSC2-203ENST00000382538 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.73
TSC2-203ENST00000382538 ZBTB7CA1YPR0 619 aa19.55■□□□□ 0.72
TSC2-203ENST00000382538 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
TSC2-203ENST00000382538 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
TSC2-203ENST00000382538 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
TSC2-203ENST00000382538 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
TSC2-203ENST00000382538 PLEKHG5O94827 1062 aa19.53■□□□□ 0.72
TSC2-203ENST00000382538 KNSTRNQ9Y448 316 aa19.52■□□□□ 0.72
TSC2-203ENST00000382538 KANK1Q14678 1352 aa19.49■□□□□ 0.71
TSC2-203ENST00000382538 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
TSC2-203ENST00000382538 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
TSC2-203ENST00000382538 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
TSC2-203ENST00000382538 TIMELESSQ9UNS1 1208 aa19.49■□□□□ 0.71
TSC2-203ENST00000382538 NUDCQ9Y266 331 aa19.48■□□□□ 0.71
TSC2-203ENST00000382538 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
TSC2-203ENST00000382538 ANP32EQ9BTT0 268 aa19.45■□□□□ 0.7
TSC2-203ENST00000382538 MIER1Q8N108 512 aa19.44■□□□□ 0.7
TSC2-203ENST00000382538 CARD11Q9BXL7 1154 aa19.43■□□□□ 0.7
TSC2-203ENST00000382538 CUX1P39880 1505 aa19.43■□□□□ 0.7
TSC2-203ENST00000382538 BECN1Q14457 450 aa19.41■□□□□ 0.7
TSC2-203ENST00000382538 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
TSC2-203ENST00000382538 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
TSC2-203ENST00000382538 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
TSC2-203ENST00000382538 DDRGK1Q96HY6 314 aa19.41■□□□□ 0.7
TSC2-203ENST00000382538 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
TSC2-203ENST00000382538 MS4A1P11836 297 aa19.4■□□□□ 0.7
TSC2-203ENST00000382538 POGKQ9P215 609 aa19.39■□□□□ 0.69
TSC2-203ENST00000382538 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
TSC2-203ENST00000382538 CDK11BP21127 795 aaKnown RBP19.38■□□□□ 0.69
TSC2-203ENST00000382538 FMN1Q68DA7 1419 aa19.38■□□□□ 0.69
TSC2-203ENST00000382538 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
TSC2-203ENST00000382538 IGF1RP08069 1367 aa19.35■□□□□ 0.69
TSC2-203ENST00000382538 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
TSC2-203ENST00000382538 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
TSC2-203ENST00000382538 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
TSC2-203ENST00000382538 IRX6P78412 446 aaPredicted RBP19.33■□□□□ 0.68
TSC2-203ENST00000382538 LAMC3Q9Y6N6 1575 aa19.33■□□□□ 0.68
TSC2-203ENST00000382538 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
TSC2-203ENST00000382538 GOLGA6L22H0YM25 854 aa19.32■□□□□ 0.68
TSC2-203ENST00000382538 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
TSC2-203ENST00000382538 ARXQ96QS3 562 aa19.31■□□□□ 0.68
TSC2-203ENST00000382538 TMF1P82094 1093 aa19.29■□□□□ 0.68
TSC2-203ENST00000382538 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
TSC2-203ENST00000382538 FTSJ3Q8IY81 847 aaKnown RBP19.26■□□□□ 0.67
TSC2-203ENST00000382538 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
TSC2-203ENST00000382538 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
TSC2-203ENST00000382538 NPHP1O15259 732 aa19.25■□□□□ 0.67
TSC2-203ENST00000382538 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
TSC2-203ENST00000382538 LMOD2Q6P5Q4 547 aa19.24■□□□□ 0.67
TSC2-203ENST00000382538 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
TSC2-203ENST00000382538 CHMP4AQ9BY43 222 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms