RNA–Protein interactions for RNA: ENST00000382538.10

TSC2-203, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-203ENST00000382538 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
TSC2-203ENST00000382538 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
TSC2-203ENST00000382538 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
TSC2-203ENST00000382538 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
TSC2-203ENST00000382538 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
TSC2-203ENST00000382538 APLP2Q06481 763 aa23.41■■□□□ 1.34
TSC2-203ENST00000382538 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
TSC2-203ENST00000382538 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
TSC2-203ENST00000382538 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
TSC2-203ENST00000382538 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
TSC2-203ENST00000382538 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
TSC2-203ENST00000382538 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
TSC2-203ENST00000382538 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
TSC2-203ENST00000382538 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.19
TSC2-203ENST00000382538 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
TSC2-203ENST00000382538 UBTFP17480 764 aaKnown RBP22.31■■□□□ 1.16
TSC2-203ENST00000382538 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
TSC2-203ENST00000382538 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
TSC2-203ENST00000382538 CCER1Q8TC90 406 aaPredicted RBP22.23■■□□□ 1.15
TSC2-203ENST00000382538 ABCC9O60706 1549 aa22.16■■□□□ 1.14
TSC2-203ENST00000382538 DCAF1Q9Y4B6 1507 aa22.08■■□□□ 1.13
TSC2-203ENST00000382538 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
TSC2-203ENST00000382538 NEFLP07196 543 aa21.87■■□□□ 1.09
TSC2-203ENST00000382538 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
TSC2-203ENST00000382538 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
TSC2-203ENST00000382538 NACADO15069 1562 aa21.78■■□□□ 1.08
TSC2-203ENST00000382538 PPARGC1BQ86YN6 1023 aaKnown RBP21.74■■□□□ 1.07
TSC2-203ENST00000382538 TRIM26Q12899 539 aaPredicted RBP21.68■■□□□ 1.06
TSC2-203ENST00000382538 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
TSC2-203ENST00000382538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
TSC2-203ENST00000382538 HNRNPUL2Q1KMD3 747 aaKnown RBP21.66■■□□□ 1.06
TSC2-203ENST00000382538 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
TSC2-203ENST00000382538 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
TSC2-203ENST00000382538 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
TSC2-203ENST00000382538 ITGAEP38570 1179 aa21.42■■□□□ 1.02
TSC2-203ENST00000382538 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
TSC2-203ENST00000382538 MYT1Q01538 1121 aa21.32■■□□□ 1
TSC2-203ENST00000382538 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 18e-7■■■□□ 18.8
TSC2-203ENST00000382538 DAXXQ9UER7 740 aaPredicted RBP21.23■□□□□ 0.99
TSC2-203ENST00000382538 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
TSC2-203ENST00000382538 POLR3GLQ9BT43 218 aa21.19■□□□□ 0.98
TSC2-203ENST00000382538 HRCP23327 699 aa21.18■□□□□ 0.98
TSC2-203ENST00000382538 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
TSC2-203ENST00000382538 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
TSC2-203ENST00000382538 FAM50AQ14320 339 aaKnown RBP21.01■□□□□ 0.95
TSC2-203ENST00000382538 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
TSC2-203ENST00000382538 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
TSC2-203ENST00000382538 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
TSC2-203ENST00000382538 CDK11AQ9UQ88 783 aaPredicted RBP20.83■□□□□ 0.93
TSC2-203ENST00000382538 FBLN2P98095 1184 aa20.79■□□□□ 0.92
TSC2-203ENST00000382538 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
TSC2-203ENST00000382538 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
TSC2-203ENST00000382538 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
TSC2-203ENST00000382538 DIEXFQ68CQ4 756 aaKnown RBP20.72■□□□□ 0.91
TSC2-203ENST00000382538 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
TSC2-203ENST00000382538 ANP32CO43423 234 aa20.66■□□□□ 0.9
TSC2-203ENST00000382538 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
TSC2-203ENST00000382538 NEFMP07197 916 aa20.65■□□□□ 0.9
TSC2-203ENST00000382538 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
TSC2-203ENST00000382538 ZBTB47Q9UFB7 747 aaPredicted RBP20.65■□□□□ 0.9
TSC2-203ENST00000382538 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.89
TSC2-203ENST00000382538 BCANQ96GW7 911 aa20.62■□□□□ 0.89
TSC2-203ENST00000382538 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
TSC2-203ENST00000382538 WIZO95785 1651 aa20.59■□□□□ 0.89
TSC2-203ENST00000382538 RTL5Q5HYW3 569 aaPredicted RBP20.58■□□□□ 0.89
TSC2-203ENST00000382538 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
TSC2-203ENST00000382538 EEA1Q15075 1411 aa20.55■□□□□ 0.88
TSC2-203ENST00000382538 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
TSC2-203ENST00000382538 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
TSC2-203ENST00000382538 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.88
TSC2-203ENST00000382538 SLC24A1O60721 1099 aa20.48■□□□□ 0.87
TSC2-203ENST00000382538 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
TSC2-203ENST00000382538 P3H3Q8IVL6 736 aa20.44■□□□□ 0.86
TSC2-203ENST00000382538 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
TSC2-203ENST00000382538 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
TSC2-203ENST00000382538 ACIN1Q9UKV3 1341 aaKnown RBP20.39■□□□□ 0.85
TSC2-203ENST00000382538 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
TSC2-203ENST00000382538 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
TSC2-203ENST00000382538 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
TSC2-203ENST00000382538 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
TSC2-203ENST00000382538 TONSLQ96HA7 1378 aa20.27■□□□□ 0.84
TSC2-203ENST00000382538 STAG3Q9UJ98 1225 aa20.27■□□□□ 0.84
TSC2-203ENST00000382538 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
TSC2-203ENST00000382538 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
TSC2-203ENST00000382538 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
TSC2-203ENST00000382538 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
TSC2-203ENST00000382538 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
TSC2-203ENST00000382538 TNIKQ9UKE5 1360 aa20.17■□□□□ 0.82
TSC2-203ENST00000382538 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
TSC2-203ENST00000382538 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
TSC2-203ENST00000382538 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
TSC2-203ENST00000382538 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
TSC2-203ENST00000382538 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
TSC2-203ENST00000382538 BCL11AQ9H165 835 aa20.1■□□□□ 0.81
TSC2-203ENST00000382538 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
TSC2-203ENST00000382538 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.8
TSC2-203ENST00000382538 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
TSC2-203ENST00000382538 CLIP1P30622 1438 aa20.05■□□□□ 0.8
TSC2-203ENST00000382538 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
TSC2-203ENST00000382538 SOGA1O94964 1423 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms