RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
LOH12CR2-201ENST00000381800 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
LOH12CR2-201ENST00000381800 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
LOH12CR2-201ENST00000381800 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
LOH12CR2-201ENST00000381800 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
LOH12CR2-201ENST00000381800 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.54
LOH12CR2-201ENST00000381800 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
LOH12CR2-201ENST00000381800 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
LOH12CR2-201ENST00000381800 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
LOH12CR2-201ENST00000381800 SAMD9Q5K651 1589 aa24.65■■□□□ 1.54
LOH12CR2-201ENST00000381800 TIAM1Q13009 1591 aa24.64■■□□□ 1.53
LOH12CR2-201ENST00000381800 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
LOH12CR2-201ENST00000381800 FYCO1Q9BQS8 1478 aa24.61■■□□□ 1.53
LOH12CR2-201ENST00000381800 CFAP43Q8NDM7 1665 aa24.59■■□□□ 1.53
LOH12CR2-201ENST00000381800 FMN1Q68DA7 1419 aa24.58■■□□□ 1.53
LOH12CR2-201ENST00000381800 CASKIN1Q8WXD9 1431 aa24.58■■□□□ 1.53
LOH12CR2-201ENST00000381800 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.53
LOH12CR2-201ENST00000381800 PCF11O94913 1555 aaKnown RBP24.56■■□□□ 1.52
LOH12CR2-201ENST00000381800 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
LOH12CR2-201ENST00000381800 FHOD3Q2V2M9 1422 aa24.54■■□□□ 1.52
LOH12CR2-201ENST00000381800 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
LOH12CR2-201ENST00000381800 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
LOH12CR2-201ENST00000381800 LRRC9Q6ZRR7 1453 aa24.51■■□□□ 1.51
LOH12CR2-201ENST00000381800 IQGAP2Q13576 1575 aa24.49■■□□□ 1.51
LOH12CR2-201ENST00000381800 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
LOH12CR2-201ENST00000381800 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
LOH12CR2-201ENST00000381800 CCER1Q8TC90 406 aaPredicted RBP24.46■■□□□ 1.51
LOH12CR2-201ENST00000381800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
LOH12CR2-201ENST00000381800 UGGT2Q9NYU1 1516 aa24.44■■□□□ 1.5
LOH12CR2-201ENST00000381800 KIAA0586Q9BVV6 1533 aa24.4■■□□□ 1.5
LOH12CR2-201ENST00000381800 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
LOH12CR2-201ENST00000381800 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
LOH12CR2-201ENST00000381800 P3H3Q8IVL6 736 aa24.38■■□□□ 1.49
LOH12CR2-201ENST00000381800 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
LOH12CR2-201ENST00000381800 HNRNPUL2Q1KMD3 747 aaKnown RBP24.34■■□□□ 1.49
LOH12CR2-201ENST00000381800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.3■■□□□ 1.48
LOH12CR2-201ENST00000381800 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
LOH12CR2-201ENST00000381800 HECW1Q76N89 1606 aa24.27■■□□□ 1.47
LOH12CR2-201ENST00000381800 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
LOH12CR2-201ENST00000381800 LRRIQ1Q96JM4 1722 aa24.25■■□□□ 1.47
LOH12CR2-201ENST00000381800 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
LOH12CR2-201ENST00000381800 NUP160Q12769 1436 aa24.24■■□□□ 1.47
LOH12CR2-201ENST00000381800 KIAA0556O60303 1618 aa24.23■■□□□ 1.47
LOH12CR2-201ENST00000381800 EHBP1L1Q8N3D4 1523 aa24.23■■□□□ 1.47
LOH12CR2-201ENST00000381800 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
LOH12CR2-201ENST00000381800 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
LOH12CR2-201ENST00000381800 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
LOH12CR2-201ENST00000381800 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
LOH12CR2-201ENST00000381800 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
LOH12CR2-201ENST00000381800 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
LOH12CR2-201ENST00000381800 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
LOH12CR2-201ENST00000381800 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
LOH12CR2-201ENST00000381800 FGD6Q6ZV73 1430 aa24.11■■□□□ 1.45
LOH12CR2-201ENST00000381800 NCOA2Q15596 1464 aa24.09■■□□□ 1.45
LOH12CR2-201ENST00000381800 DHX57Q6P158 1386 aaKnown RBP24.08■■□□□ 1.45
LOH12CR2-201ENST00000381800 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
LOH12CR2-201ENST00000381800 CARMIL2Q6F5E8 1435 aa24.05■■□□□ 1.44
LOH12CR2-201ENST00000381800 RAPGEF6Q8TEU7 1601 aa24.05■■□□□ 1.44
LOH12CR2-201ENST00000381800 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
LOH12CR2-201ENST00000381800 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
LOH12CR2-201ENST00000381800 NUP153P49790 1475 aaKnown RBP23.99■■□□□ 1.43
LOH12CR2-201ENST00000381800 TCOF1Q13428 1488 aaKnown RBP23.99■■□□□ 1.43
LOH12CR2-201ENST00000381800 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
LOH12CR2-201ENST00000381800 RAB3GAP2Q9H2M9 1393 aa23.96■■□□□ 1.43
LOH12CR2-201ENST00000381800 CDK13Q14004 1512 aaKnown RBP23.96■■□□□ 1.43
LOH12CR2-201ENST00000381800 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
LOH12CR2-201ENST00000381800 MIA2Q96PC5 1412 aa23.96■■□□□ 1.43
LOH12CR2-201ENST00000381800 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
LOH12CR2-201ENST00000381800 FBLN2P98095 1184 aa23.92■■□□□ 1.42
LOH12CR2-201ENST00000381800 CDK11AQ9UQ88 783 aaPredicted RBP23.89■■□□□ 1.42
LOH12CR2-201ENST00000381800 ABCA8O94911 1581 aa23.88■■□□□ 1.41
LOH12CR2-201ENST00000381800 CHD1O14646 1710 aa23.88■■□□□ 1.41
LOH12CR2-201ENST00000381800 ITGAEP38570 1179 aa23.88■■□□□ 1.41
LOH12CR2-201ENST00000381800 HFM1A2PYH4 1435 aa23.86■■□□□ 1.41
LOH12CR2-201ENST00000381800 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
LOH12CR2-201ENST00000381800 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
LOH12CR2-201ENST00000381800 TROQ12816 1431 aaPredicted RBP23.84■■□□□ 1.41
LOH12CR2-201ENST00000381800 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
LOH12CR2-201ENST00000381800 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
LOH12CR2-201ENST00000381800 MAPKBP1O60336 1514 aa23.8■■□□□ 1.4
LOH12CR2-201ENST00000381800 PTPRKQ15262 1439 aa23.8■■□□□ 1.4
LOH12CR2-201ENST00000381800 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
LOH12CR2-201ENST00000381800 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
LOH12CR2-201ENST00000381800 NAIPQ13075 1403 aa23.74■■□□□ 1.39
LOH12CR2-201ENST00000381800 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
LOH12CR2-201ENST00000381800 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
LOH12CR2-201ENST00000381800 GCC2Q8IWJ2 1684 aa23.73■■□□□ 1.39
LOH12CR2-201ENST00000381800 PTPRGP23470 1445 aa23.71■■□□□ 1.39
LOH12CR2-201ENST00000381800 UACAQ9BZF9 1416 aa23.7■■□□□ 1.38
LOH12CR2-201ENST00000381800 ATP10BO94823 1461 aa23.69■■□□□ 1.38
LOH12CR2-201ENST00000381800 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
LOH12CR2-201ENST00000381800 TIMELESSQ9UNS1 1208 aa23.69■■□□□ 1.38
LOH12CR2-201ENST00000381800 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
LOH12CR2-201ENST00000381800 ROCK1Q13464 1354 aa23.68■■□□□ 1.38
LOH12CR2-201ENST00000381800 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.37
LOH12CR2-201ENST00000381800 KIF14Q15058 1648 aa23.64■■□□□ 1.37
LOH12CR2-201ENST00000381800 DAPK1P53355 1430 aa23.62■■□□□ 1.37
LOH12CR2-201ENST00000381800 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
LOH12CR2-201ENST00000381800 POTEDQ86YR6 584 aa23.62■■□□□ 1.37
LOH12CR2-201ENST00000381800 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms