RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
PITRM1-202ENST00000380989 ACIN1Q9UKV3 1341 aaKnown RBP17.78■□□□□ 0.44
PITRM1-202ENST00000380989 CLIP1P30622 1438 aa17.78■□□□□ 0.44
PITRM1-202ENST00000380989 FBLN2P98095 1184 aa17.77■□□□□ 0.44
PITRM1-202ENST00000380989 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
PITRM1-202ENST00000380989 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
PITRM1-202ENST00000380989 SNAPC4Q5SXM2 1469 aa17.74■□□□□ 0.43
PITRM1-202ENST00000380989 CUL7Q14999 1698 aa17.73■□□□□ 0.43
PITRM1-202ENST00000380989 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
PITRM1-202ENST00000380989 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
PITRM1-202ENST00000380989 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
PITRM1-202ENST00000380989 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
PITRM1-202ENST00000380989 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
PITRM1-202ENST00000380989 ARAP1Q96P48 1450 aa17.65■□□□□ 0.42
PITRM1-202ENST00000380989 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
PITRM1-202ENST00000380989 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
PITRM1-202ENST00000380989 CTTNBP2Q8WZ74 1663 aa17.59■□□□□ 0.41
PITRM1-202ENST00000380989 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
PITRM1-202ENST00000380989 FHOD3Q2V2M9 1422 aa17.57■□□□□ 0.4
PITRM1-202ENST00000380989 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
PITRM1-202ENST00000380989 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
PITRM1-202ENST00000380989 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
PITRM1-202ENST00000380989 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
PITRM1-202ENST00000380989 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
PITRM1-202ENST00000380989 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
PITRM1-202ENST00000380989 ARID3CA6NKF2 412 aa17.46■□□□□ 0.39
PITRM1-202ENST00000380989 CHD1O14646 1710 aa17.46■□□□□ 0.39
PITRM1-202ENST00000380989 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
PITRM1-202ENST00000380989 APLP2Q06481 763 aa17.44■□□□□ 0.38
PITRM1-202ENST00000380989 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
PITRM1-202ENST00000380989 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
PITRM1-202ENST00000380989 JPH4Q96JJ6 628 aa17.4■□□□□ 0.38
PITRM1-202ENST00000380989 SAMD9Q5K651 1589 aa17.39■□□□□ 0.37
PITRM1-202ENST00000380989 NUP160Q12769 1436 aa17.39■□□□□ 0.37
PITRM1-202ENST00000380989 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
PITRM1-202ENST00000380989 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
PITRM1-202ENST00000380989 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
PITRM1-202ENST00000380989 UGGT2Q9NYU1 1516 aa17.33■□□□□ 0.36
PITRM1-202ENST00000380989 MIER1Q8N108 512 aa17.31■□□□□ 0.36
PITRM1-202ENST00000380989 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
PITRM1-202ENST00000380989 FMN1Q68DA7 1419 aa17.28■□□□□ 0.36
PITRM1-202ENST00000380989 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
PITRM1-202ENST00000380989 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.36
PITRM1-202ENST00000380989 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
PITRM1-202ENST00000380989 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
PITRM1-202ENST00000380989 TIAM1Q13009 1591 aa17.24■□□□□ 0.35
PITRM1-202ENST00000380989 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
PITRM1-202ENST00000380989 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
PITRM1-202ENST00000380989 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
PITRM1-202ENST00000380989 CDK13Q14004 1512 aaKnown RBP17.21■□□□□ 0.35
PITRM1-202ENST00000380989 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.34
PITRM1-202ENST00000380989 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
PITRM1-202ENST00000380989 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
PITRM1-202ENST00000380989 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
PITRM1-202ENST00000380989 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
PITRM1-202ENST00000380989 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
PITRM1-202ENST00000380989 MAGI3Q5TCQ9 1506 aa17.14■□□□□ 0.34
PITRM1-202ENST00000380989 ITGAEP38570 1179 aa17.14■□□□□ 0.33
PITRM1-202ENST00000380989 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
PITRM1-202ENST00000380989 EPRSP07814 1512 aaKnown RBP17.14■□□□□ 0.33
PITRM1-202ENST00000380989 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
PITRM1-202ENST00000380989 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
PITRM1-202ENST00000380989 PTPRGP23470 1445 aa17.13■□□□□ 0.33
PITRM1-202ENST00000380989 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
PITRM1-202ENST00000380989 RAPGEF6Q8TEU7 1601 aa17.12■□□□□ 0.33
PITRM1-202ENST00000380989 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
PITRM1-202ENST00000380989 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
PITRM1-202ENST00000380989 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
PITRM1-202ENST00000380989 ABCA8O94911 1581 aa17.03■□□□□ 0.32
PITRM1-202ENST00000380989 CCDC18Q5T9S5 1454 aa17.03■□□□□ 0.32
PITRM1-202ENST00000380989 NCOA2Q15596 1464 aa17.02■□□□□ 0.31
PITRM1-202ENST00000380989 ATP10BO94823 1461 aa17.01■□□□□ 0.31
PITRM1-202ENST00000380989 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
PITRM1-202ENST00000380989 UACAQ9BZF9 1416 aa17■□□□□ 0.31
PITRM1-202ENST00000380989 MYT1Q01538 1121 aa16.98■□□□□ 0.31
PITRM1-202ENST00000380989 RRBP1Q9P2E9 1410 aaKnown RBP16.98■□□□□ 0.31
PITRM1-202ENST00000380989 EHBP1L1Q8N3D4 1523 aa16.97■□□□□ 0.31
PITRM1-202ENST00000380989 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
PITRM1-202ENST00000380989 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
PITRM1-202ENST00000380989 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
PITRM1-202ENST00000380989 KIF14Q15058 1648 aa16.94■□□□□ 0.3
PITRM1-202ENST00000380989 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
PITRM1-202ENST00000380989 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
PITRM1-202ENST00000380989 BCANQ96GW7 911 aa16.93■□□□□ 0.3
PITRM1-202ENST00000380989 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
PITRM1-202ENST00000380989 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
PITRM1-202ENST00000380989 TROQ12816 1431 aaPredicted RBP16.9■□□□□ 0.3
PITRM1-202ENST00000380989 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
PITRM1-202ENST00000380989 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
PITRM1-202ENST00000380989 CYB5RLQ6IPT4 315 aa16.89■□□□□ 0.29
PITRM1-202ENST00000380989 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
PITRM1-202ENST00000380989 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
PITRM1-202ENST00000380989 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
PITRM1-202ENST00000380989 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
PITRM1-202ENST00000380989 ZCCHC11Q5TAX3 1644 aaKnown RBP16.85■□□□□ 0.29
PITRM1-202ENST00000380989 PTPRKQ15262 1439 aa16.84■□□□□ 0.29
PITRM1-202ENST00000380989 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
PITRM1-202ENST00000380989 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
PITRM1-202ENST00000380989 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
PITRM1-202ENST00000380989 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms