RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
HMGN1-202ENST00000380747 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
HMGN1-202ENST00000380747 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
HMGN1-202ENST00000380747 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
HMGN1-202ENST00000380747 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
HMGN1-202ENST00000380747 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
HMGN1-202ENST00000380747 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
HMGN1-202ENST00000380747 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
HMGN1-202ENST00000380747 GRIN2AQ12879 1464 aa15.8■□□□□ 0.12
HMGN1-202ENST00000380747 NUP160Q12769 1436 aa15.79■□□□□ 0.12
HMGN1-202ENST00000380747 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
HMGN1-202ENST00000380747 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
HMGN1-202ENST00000380747 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
HMGN1-202ENST00000380747 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
HMGN1-202ENST00000380747 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
HMGN1-202ENST00000380747 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
HMGN1-202ENST00000380747 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
HMGN1-202ENST00000380747 IGF1RP08069 1367 aa15.62■□□□□ 0.09
HMGN1-202ENST00000380747 KIF13AQ9H1H9 1805 aa15.62■□□□□ 0.09
HMGN1-202ENST00000380747 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-202ENST00000380747 DMRT2Q9Y5R5 561 aa15.61■□□□□ 0.09
HMGN1-202ENST00000380747 JPH4Q96JJ6 628 aa15.59■□□□□ 0.09
HMGN1-202ENST00000380747 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-202ENST00000380747 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
HMGN1-202ENST00000380747 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
HMGN1-202ENST00000380747 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
HMGN1-202ENST00000380747 CUL7Q14999 1698 aa15.55■□□□□ 0.08
HMGN1-202ENST00000380747 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
HMGN1-202ENST00000380747 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
HMGN1-202ENST00000380747 FAM69CQ0P6D2 419 aa15.52■□□□□ 0.08
HMGN1-202ENST00000380747 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
HMGN1-202ENST00000380747 DIP2BQ9P265 1576 aa15.5■□□□□ 0.07
HMGN1-202ENST00000380747 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.07
HMGN1-202ENST00000380747 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
HMGN1-202ENST00000380747 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
HMGN1-202ENST00000380747 HOXD11P31277 338 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-202ENST00000380747 KDM6BO15054 1643 aa15.43■□□□□ 0.06
HMGN1-202ENST00000380747 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
HMGN1-202ENST00000380747 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-202ENST00000380747 EEA1Q15075 1411 aa15.39■□□□□ 0.05
HMGN1-202ENST00000380747 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
HMGN1-202ENST00000380747 PTPRGP23470 1445 aa15.34■□□□□ 0.05
HMGN1-202ENST00000380747 ABCC2Q92887 1545 aa15.33■□□□□ 0.04
HMGN1-202ENST00000380747 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
HMGN1-202ENST00000380747 ZBTB22O15209 634 aa15.32■□□□□ 0.04
HMGN1-202ENST00000380747 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
HMGN1-202ENST00000380747 GLI2P10070 1586 aa15.31■□□□□ 0.04
HMGN1-202ENST00000380747 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
HMGN1-202ENST00000380747 TSPOAP1O95153 1857 aa15.29■□□□□ 0.04
HMGN1-202ENST00000380747 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
HMGN1-202ENST00000380747 UHRF1BP1LA0JNW5 1464 aa15.28■□□□□ 0.04
HMGN1-202ENST00000380747 ILDR1Q86SU0 546 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-202ENST00000380747 ASXL2Q76L83 1435 aa15.27■□□□□ 0.04
HMGN1-202ENST00000380747 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-202ENST00000380747 CTTNBP2Q8WZ74 1663 aa15.25■□□□□ 0.03
HMGN1-202ENST00000380747 PPRC1Q5VV67 1664 aaKnown RBP15.25■□□□□ 0.03
HMGN1-202ENST00000380747 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
HMGN1-202ENST00000380747 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
HMGN1-202ENST00000380747 ADGRL1O94910 1474 aa15.22■□□□□ 0.03
HMGN1-202ENST00000380747 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
HMGN1-202ENST00000380747 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.03
HMGN1-202ENST00000380747 KIF21BO75037 1637 aa15.21■□□□□ 0.02
HMGN1-202ENST00000380747 EPRSP07814 1512 aaKnown RBP15.19■□□□□ 0.02
HMGN1-202ENST00000380747 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-202ENST00000380747 KIAA0556O60303 1618 aa15.18■□□□□ 0.02
HMGN1-202ENST00000380747 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-202ENST00000380747 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
HMGN1-202ENST00000380747 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
HMGN1-202ENST00000380747 TEX14Q8IWB6 1497 aa15.18■□□□□ 0.02
HMGN1-202ENST00000380747 MAP3K4Q9Y6R4 1608 aa15.17■□□□□ 0.02
HMGN1-202ENST00000380747 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
HMGN1-202ENST00000380747 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
HMGN1-202ENST00000380747 HECW2Q9P2P5 1572 aa15.1■□□□□ 0.01
HMGN1-202ENST00000380747 ZCCHC11Q5TAX3 1644 aaKnown RBP15.1■□□□□ 0.01
HMGN1-202ENST00000380747 WDR7Q9Y4E6 1490 aa15.09■□□□□ 0.01
HMGN1-202ENST00000380747 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
HMGN1-202ENST00000380747 SAMD9Q5K651 1589 aa15.07■□□□□ 0
HMGN1-202ENST00000380747 SLC4A2P04920 1241 aa15.04■□□□□ -0
HMGN1-202ENST00000380747 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
HMGN1-202ENST00000380747 EFCAB5A4FU69 1503 aa15.02■□□□□ -0
HMGN1-202ENST00000380747 ABCA8O94911 1581 aa15.02□□□□□ -0.01
HMGN1-202ENST00000380747 CD109Q6YHK3 1445 aa15.01□□□□□ -0.01
HMGN1-202ENST00000380747 CFAP43Q8NDM7 1665 aa15.01□□□□□ -0.01
HMGN1-202ENST00000380747 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
HMGN1-202ENST00000380747 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
HMGN1-202ENST00000380747 ARAP3Q8WWN8 1544 aa14.96□□□□□ -0.02
HMGN1-202ENST00000380747 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
HMGN1-202ENST00000380747 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
HMGN1-202ENST00000380747 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
HMGN1-202ENST00000380747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-202ENST00000380747 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
HMGN1-202ENST00000380747 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
HMGN1-202ENST00000380747 ATP10BO94823 1461 aa14.9□□□□□ -0.02
HMGN1-202ENST00000380747 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
HMGN1-202ENST00000380747 ATP1B4Q9UN42 357 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-202ENST00000380747 FMN1Q68DA7 1419 aa14.9□□□□□ -0.02
HMGN1-202ENST00000380747 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
HMGN1-202ENST00000380747 CLIP1P30622 1438 aa14.89□□□□□ -0.03
HMGN1-202ENST00000380747 NUP153P49790 1475 aaKnown RBP14.89□□□□□ -0.03
HMGN1-202ENST00000380747 PTPRMP28827 1452 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms