RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
UBL3-201ENST00000380680 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
UBL3-201ENST00000380680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.52■■□□□ 1.52
UBL3-201ENST00000380680 HNRNPUQ00839 825 aaKnown RBP eCLIP24.51■■□□□ 1.51
UBL3-201ENST00000380680 PLEKHD1A6NEE1 506 aa24.49■■□□□ 1.51
UBL3-201ENST00000380680 FKBP8Q14318 412 aa24.45■■□□□ 1.51
UBL3-201ENST00000380680 KDM2AQ9Y2K7 1162 aa24.45■■□□□ 1.5
UBL3-201ENST00000380680 FAM9BQ8IZU0 186 aa24.45■■□□□ 1.5
UBL3-201ENST00000380680 CFDP1Q9UEE9 299 aaPredicted RBP24.45■■□□□ 1.5
UBL3-201ENST00000380680 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
UBL3-201ENST00000380680 DAXXQ9UER7 740 aaPredicted RBP24.4■■□□□ 1.5
UBL3-201ENST00000380680 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.5
UBL3-201ENST00000380680 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
UBL3-201ENST00000380680 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
UBL3-201ENST00000380680 KCNH8Q96L42 1107 aa24.39■■□□□ 1.49
UBL3-201ENST00000380680 NPM1P06748 294 aaKnown RBP eCLIP24.34■■□□□ 1.49
UBL3-201ENST00000380680 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
UBL3-201ENST00000380680 MRS2Q9HD23 443 aa24.3■■□□□ 1.48
UBL3-201ENST00000380680 SETD5Q9C0A6 1442 aa24.3■■□□□ 1.48
UBL3-201ENST00000380680 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
UBL3-201ENST00000380680 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
UBL3-201ENST00000380680 RAB3GAP2Q9H2M9 1393 aa24.26■■□□□ 1.47
UBL3-201ENST00000380680 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
UBL3-201ENST00000380680 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
UBL3-201ENST00000380680 TMC1Q8TDI8 760 aa24.24■■□□□ 1.47
UBL3-201ENST00000380680 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
UBL3-201ENST00000380680 SALL2Q9Y467 1007 aaPredicted RBP24.22■■□□□ 1.47
UBL3-201ENST00000380680 RGL3Q3MIN7 710 aa24.21■■□□□ 1.47
UBL3-201ENST00000380680 IGF1RP08069 1367 aa24.2■■□□□ 1.46
UBL3-201ENST00000380680 TIMELESSQ9UNS1 1208 aa24.16■■□□□ 1.46
UBL3-201ENST00000380680 FGD5Q6ZNL6 1462 aa24.12■■□□□ 1.45
UBL3-201ENST00000380680 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
UBL3-201ENST00000380680 IRX6P78412 446 aaPredicted RBP24.1■■□□□ 1.45
UBL3-201ENST00000380680 FOXD1Q16676 465 aa24.07■■□□□ 1.44
UBL3-201ENST00000380680 DHX57Q6P158 1386 aaKnown RBP24.05■■□□□ 1.44
UBL3-201ENST00000380680 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
UBL3-201ENST00000380680 CARD11Q9BXL7 1154 aa24.04■■□□□ 1.44
UBL3-201ENST00000380680 CANXP27824 592 aaKnown RBP24.03■■□□□ 1.44
UBL3-201ENST00000380680 KIF21BO75037 1637 aa24.02■■□□□ 1.44
UBL3-201ENST00000380680 STAG3Q9UJ98 1225 aa24.01■■□□□ 1.43
UBL3-201ENST00000380680 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
UBL3-201ENST00000380680 CFTRP13569 1480 aa24■■□□□ 1.43
UBL3-201ENST00000380680 RTL5Q5HYW3 569 aaPredicted RBP24■■□□□ 1.43
UBL3-201ENST00000380680 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
UBL3-201ENST00000380680 PPP1R15AO75807 674 aaPredicted RBP23.99■■□□□ 1.43
UBL3-201ENST00000380680 ESF1Q9H501 851 aaKnown RBP23.97■■□□□ 1.43
UBL3-201ENST00000380680 MPHOSPH9Q99550 1183 aa23.96■■□□□ 1.43
UBL3-201ENST00000380680 CARMIL2Q6F5E8 1435 aa23.95■■□□□ 1.42
UBL3-201ENST00000380680 HSPA5P11021 654 aaKnown RBP23.92■■□□□ 1.42
UBL3-201ENST00000380680 PKD2Q13563 968 aa23.91■■□□□ 1.42
UBL3-201ENST00000380680 NEFMP07197 916 aa23.91■■□□□ 1.42
UBL3-201ENST00000380680 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
UBL3-201ENST00000380680 DCAF11Q8TEB1 546 aa23.9■■□□□ 1.42
UBL3-201ENST00000380680 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
UBL3-201ENST00000380680 JPH4Q96JJ6 628 aa23.89■■□□□ 1.42
UBL3-201ENST00000380680 SUPT16HQ9Y5B9 1047 aaKnown RBP23.89■■□□□ 1.42
UBL3-201ENST00000380680 ARAP1Q96P48 1450 aa23.89■■□□□ 1.41
UBL3-201ENST00000380680 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
UBL3-201ENST00000380680 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
UBL3-201ENST00000380680 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
UBL3-201ENST00000380680 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
UBL3-201ENST00000380680 CUX1P39880 1505 aa23.83■■□□□ 1.41
UBL3-201ENST00000380680 HMGXB3Q12766 1538 aa23.83■■□□□ 1.4
UBL3-201ENST00000380680 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
UBL3-201ENST00000380680 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
UBL3-201ENST00000380680 ANP32AP39687 249 aaKnown RBP23.82■■□□□ 1.4
UBL3-201ENST00000380680 L3MBTL2Q969R5 705 aa23.82■■□□□ 1.4
UBL3-201ENST00000380680 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
UBL3-201ENST00000380680 NESP48681 1621 aa23.81■■□□□ 1.4
UBL3-201ENST00000380680 BCL11AQ9H165 835 aa23.8■■□□□ 1.4
UBL3-201ENST00000380680 PHLDB1Q86UU1 1377 aa23.8■■□□□ 1.4
UBL3-201ENST00000380680 CCER2I3L3R5 266 aa23.79■■□□□ 1.4
UBL3-201ENST00000380680 NUP155O75694 1391 aa23.77■■□□□ 1.4
UBL3-201ENST00000380680 CCDC18Q5T9S5 1454 aa23.77■■□□□ 1.4
UBL3-201ENST00000380680 HNRNPMP52272 730 aaKnown RBP eCLIP23.74■■□□□ 1.39
UBL3-201ENST00000380680 ANKRD30AQ9BXX3 1397 aa23.74■■□□□ 1.39
UBL3-201ENST00000380680 KNSTRNQ9Y448 316 aa23.73■■□□□ 1.39
UBL3-201ENST00000380680 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.39
UBL3-201ENST00000380680 LRRC9Q6ZRR7 1453 aa23.72■■□□□ 1.39
UBL3-201ENST00000380680 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
UBL3-201ENST00000380680 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
UBL3-201ENST00000380680 CDCA8Q53HL2 280 aa23.69■■□□□ 1.38
UBL3-201ENST00000380680 ZBTB47Q9UFB7 747 aaPredicted RBP23.69■■□□□ 1.38
UBL3-201ENST00000380680 FGD6Q6ZV73 1430 aa23.66■■□□□ 1.38
UBL3-201ENST00000380680 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
UBL3-201ENST00000380680 CC2D1BQ5T0F9 858 aaKnown RBP23.65■■□□□ 1.38
UBL3-201ENST00000380680 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.38
UBL3-201ENST00000380680 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.64■■□□□ 1.38
UBL3-201ENST00000380680 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
UBL3-201ENST00000380680 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
UBL3-201ENST00000380680 CASKIN1Q8WXD9 1431 aa23.62■■□□□ 1.37
UBL3-201ENST00000380680 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
UBL3-201ENST00000380680 RRBP1Q9P2E9 1410 aaKnown RBP23.61■■□□□ 1.37
UBL3-201ENST00000380680 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
UBL3-201ENST00000380680 TMF1P82094 1093 aa23.59■■□□□ 1.37
UBL3-201ENST00000380680 MYOM3Q5VTT5 1437 aa23.59■■□□□ 1.37
UBL3-201ENST00000380680 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
UBL3-201ENST00000380680 PTPRGP23470 1445 aa23.54■■□□□ 1.36
UBL3-201ENST00000380680 GGT6Q6P531 493 aa23.53■■□□□ 1.36
UBL3-201ENST00000380680 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms