RNA–Protein interactions for RNA: ENST00000380516.6

SLTM-202, Transcript of SAFB like transcription modulator, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SLTM, Length 4,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-202ENST00000380516 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
SLTM-202ENST00000380516 IGF1RP08069 1367 aa14.34□□□□□ -0.11
SLTM-202ENST00000380516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.115e-7■■■■□ 19.7
SLTM-202ENST00000380516 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.12
SLTM-202ENST00000380516 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.121e-6■■■■□ 24.8
SLTM-202ENST00000380516 CUX1P39880 1505 aa14.31□□□□□ -0.12
SLTM-202ENST00000380516 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
SLTM-202ENST00000380516 MIER1Q8N108 512 aa14.31□□□□□ -0.12
SLTM-202ENST00000380516 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
SLTM-202ENST00000380516 CFTRP13569 1480 aa14.26□□□□□ -0.13
SLTM-202ENST00000380516 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
SLTM-202ENST00000380516 BCANQ96GW7 911 aa14.25□□□□□ -0.13
SLTM-202ENST00000380516 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
SLTM-202ENST00000380516 GTF3C3Q9Y5Q9 886 aa14.23□□□□□ -0.13
SLTM-202ENST00000380516 ARAP1Q96P48 1450 aa14.21□□□□□ -0.13
SLTM-202ENST00000380516 CCNB3Q8WWL7 1395 aa14.2□□□□□ -0.14
SLTM-202ENST00000380516 CDK11AQ9UQ88 783 aaPredicted RBP14.17□□□□□ -0.14
SLTM-202ENST00000380516 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
SLTM-202ENST00000380516 RGL3Q3MIN7 710 aa14.16□□□□□ -0.14
SLTM-202ENST00000380516 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
SLTM-202ENST00000380516 ZNF644Q9H582 1327 aaPredicted RBP14.15□□□□□ -0.14
SLTM-202ENST00000380516 KIF21BO75037 1637 aa14.15□□□□□ -0.14
SLTM-202ENST00000380516 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
SLTM-202ENST00000380516 TONSLQ96HA7 1378 aa14.12□□□□□ -0.15
SLTM-202ENST00000380516 PLEKHD1A6NEE1 506 aa14.12□□□□□ -0.15
SLTM-202ENST00000380516 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
SLTM-202ENST00000380516 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
SLTM-202ENST00000380516 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
SLTM-202ENST00000380516 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
SLTM-202ENST00000380516 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
SLTM-202ENST00000380516 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
SLTM-202ENST00000380516 ARHGAP35Q9NRY4 1499 aa14.09□□□□□ -0.15
SLTM-202ENST00000380516 HMGXB3Q12766 1538 aa14.08□□□□□ -0.15
SLTM-202ENST00000380516 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
SLTM-202ENST00000380516 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
SLTM-202ENST00000380516 SALL2Q9Y467 1007 aaPredicted RBP14.07□□□□□ -0.16
SLTM-202ENST00000380516 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
SLTM-202ENST00000380516 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
SLTM-202ENST00000380516 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
SLTM-202ENST00000380516 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.166e-9■■■■■ 29.9
SLTM-202ENST00000380516 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
SLTM-202ENST00000380516 ACIN1Q9UKV3 1341 aaKnown RBP14.03□□□□□ -0.16
SLTM-202ENST00000380516 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.17
SLTM-202ENST00000380516 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.17
SLTM-202ENST00000380516 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
SLTM-202ENST00000380516 ANP32CO43423 234 aa13.99□□□□□ -0.17
SLTM-202ENST00000380516 FAM9BQ8IZU0 186 aa13.99□□□□□ -0.17
SLTM-202ENST00000380516 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
SLTM-202ENST00000380516 DHX57Q6P158 1386 aaKnown RBP13.97□□□□□ -0.17
SLTM-202ENST00000380516 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
SLTM-202ENST00000380516 SETD5Q9C0A6 1442 aa13.94□□□□□ -0.18
SLTM-202ENST00000380516 FMN1Q68DA7 1419 aa13.91□□□□□ -0.18
SLTM-202ENST00000380516 NEFLP07196 543 aa13.91□□□□□ -0.18
SLTM-202ENST00000380516 PKD2Q13563 968 aa13.89□□□□□ -0.19
SLTM-202ENST00000380516 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
SLTM-202ENST00000380516 MLECQ14165 292 aa13.88□□□□□ -0.19
SLTM-202ENST00000380516 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
SLTM-202ENST00000380516 NUTM2DQ5VT03 806 aaPredicted RBP13.87□□□□□ -0.19
SLTM-202ENST00000380516 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
SLTM-202ENST00000380516 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
SLTM-202ENST00000380516 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
SLTM-202ENST00000380516 DCAF11Q8TEB1 546 aa13.86□□□□□ -0.19
SLTM-202ENST00000380516 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
SLTM-202ENST00000380516 LRRC9Q6ZRR7 1453 aa13.85□□□□□ -0.19
SLTM-202ENST00000380516 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
SLTM-202ENST00000380516 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
SLTM-202ENST00000380516 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
SLTM-202ENST00000380516 PRDM2Q13029 1718 aa13.83□□□□□ -0.19
SLTM-202ENST00000380516 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
SLTM-202ENST00000380516 GGT6Q6P531 493 aa13.83□□□□□ -0.2
SLTM-202ENST00000380516 PRG4Q92954 1404 aaPredicted RBP13.82□□□□□ -0.2
SLTM-202ENST00000380516 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
SLTM-202ENST00000380516 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
SLTM-202ENST00000380516 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
SLTM-202ENST00000380516 HSPA5P11021 654 aaKnown RBP13.8□□□□□ -0.2
SLTM-202ENST00000380516 FKBP8Q14318 412 aa13.8□□□□□ -0.2
SLTM-202ENST00000380516 PTPRGP23470 1445 aa13.79□□□□□ -0.2
SLTM-202ENST00000380516 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
SLTM-202ENST00000380516 BCL11AQ9H165 835 aa13.79□□□□□ -0.2
SLTM-202ENST00000380516 CARMIL2Q6F5E8 1435 aa13.79□□□□□ -0.2
SLTM-202ENST00000380516 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
SLTM-202ENST00000380516 NUP155O75694 1391 aa13.78□□□□□ -0.2
SLTM-202ENST00000380516 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
SLTM-202ENST00000380516 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
SLTM-202ENST00000380516 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
SLTM-202ENST00000380516 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.2
SLTM-202ENST00000380516 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
SLTM-202ENST00000380516 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
SLTM-202ENST00000380516 NCOA2Q15596 1464 aa13.77□□□□□ -0.21
SLTM-202ENST00000380516 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
SLTM-202ENST00000380516 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
SLTM-202ENST00000380516 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
SLTM-202ENST00000380516 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
SLTM-202ENST00000380516 LAMC3Q9Y6N6 1575 aa13.73□□□□□ -0.21
SLTM-202ENST00000380516 TNNT2P45379 298 aaPredicted RBP13.73□□□□□ -0.21
SLTM-202ENST00000380516 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
SLTM-202ENST00000380516 KIF3BO15066 747 aa13.72□□□□□ -0.21
SLTM-202ENST00000380516 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.21
SLTM-202ENST00000380516 CC2D1BQ5T0F9 858 aaKnown RBP13.7□□□□□ -0.22
SLTM-202ENST00000380516 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms