RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 FAM9AQ8IZU1 332 aaPredicted RBP44.63■■■■■ 4.74
ATRAID-201ENST00000380171 CSRNP3Q8WYN3 585 aa44.63■■■■■ 4.74
ATRAID-201ENST00000380171 SHROOM2Q13796 1616 aa44.57■■■■■ 4.72
ATRAID-201ENST00000380171 KIAA0586Q9BVV6 1533 aa44.54■■■■■ 4.72
ATRAID-201ENST00000380171 CTTNBP2Q8WZ74 1663 aa44.45■■■■■ 4.71
ATRAID-201ENST00000380171 IQGAP2Q13576 1575 aa44.43■■■■■ 4.7
ATRAID-201ENST00000380171 KIF21BO75037 1637 aa44.42■■■■■ 4.7
ATRAID-201ENST00000380171 ERCC6L2Q5T890 1561 aa44.36■■■■■ 4.69
ATRAID-201ENST00000380171 JPH4Q96JJ6 628 aa44.33■■■■■ 4.69
ATRAID-201ENST00000380171 ARAP1Q96P48 1450 aa44.32■■■■■ 4.69
ATRAID-201ENST00000380171 PRG4Q92954 1404 aaPredicted RBP44.32■■■■■ 4.68
ATRAID-201ENST00000380171 GOLGA3Q08378 1498 aa44.15■■■■■ 4.66
ATRAID-201ENST00000380171 UGGT2Q9NYU1 1516 aa44.14■■■■■ 4.66
ATRAID-201ENST00000380171 CYB5RLQ6IPT4 315 aa44.11■■■■■ 4.65
ATRAID-201ENST00000380171 CARMIL2Q6F5E8 1435 aa44.07■■■■■ 4.64
ATRAID-201ENST00000380171 EHMT2Q96KQ7 1210 aa44.05■■■■■ 4.64
ATRAID-201ENST00000380171 DISP1Q96F81 1524 aa44.02■■■■■ 4.64
ATRAID-201ENST00000380171 KIAA0556O60303 1618 aa44.01■■■■■ 4.64
ATRAID-201ENST00000380171 UBTFP17480 764 aaKnown RBP43.91■■■■■ 4.62
ATRAID-201ENST00000380171 TNIKQ9UKE5 1360 aa43.87■■■■■ 4.61
ATRAID-201ENST00000380171 SAMD9Q5K651 1589 aa43.83■■■■■ 4.61
ATRAID-201ENST00000380171 PTPRGP23470 1445 aa43.81■■■■■ 4.6
ATRAID-201ENST00000380171 TTBK1Q5TCY1 1321 aaPredicted RBP43.77■■■■■ 4.6
ATRAID-201ENST00000380171 RANGAP1P46060 587 aaPredicted RBP43.74■■■■■ 4.59
ATRAID-201ENST00000380171 EFCAB5A4FU69 1503 aa43.7■■■■■ 4.59
ATRAID-201ENST00000380171 ADCY10Q96PN6 1610 aa43.67■■■■■ 4.58
ATRAID-201ENST00000380171 P3H3Q8IVL6 736 aa43.62■■■■■ 4.57
ATRAID-201ENST00000380171 FHOD3Q2V2M9 1422 aa43.55■■■■■ 4.56
ATRAID-201ENST00000380171 UACAQ9BZF9 1416 aa43.55■■■■■ 4.56
ATRAID-201ENST00000380171 ABCC2Q92887 1545 aa43.53■■■■■ 4.56
ATRAID-201ENST00000380171 UHRF1BP1LA0JNW5 1464 aa43.5■■■■■ 4.55
ATRAID-201ENST00000380171 PLB1Q6P1J6 1458 aa43.47■■■■■ 4.55
ATRAID-201ENST00000380171 ARHGAP35Q9NRY4 1499 aa43.47■■■■■ 4.55
ATRAID-201ENST00000380171 ABCA8O94911 1581 aa43.46■■■■■ 4.55
ATRAID-201ENST00000380171 NPM1P06748 294 aaKnown RBP eCLIP43.38■■■■■ 4.53
ATRAID-201ENST00000380171 RAPGEF6Q8TEU7 1601 aa43.35■■■■■ 4.53
ATRAID-201ENST00000380171 CLIP1P30622 1438 aa43.34■■■■■ 4.53
ATRAID-201ENST00000380171 LOC105371045A0A1W2PR82 267 aa43.34■■■■■ 4.53
ATRAID-201ENST00000380171 ZCCHC11Q5TAX3 1644 aaKnown RBP43.3■■■■■ 4.52
ATRAID-201ENST00000380171 MAPKBP1O60336 1514 aa43.3■■■■■ 4.52
ATRAID-201ENST00000380171 KDM5BQ9UGL1 1544 aa43.28■■■■■ 4.52
ATRAID-201ENST00000380171 CEP162Q5TB80 1403 aa43.24■■■■■ 4.51
ATRAID-201ENST00000380171 FMN1Q68DA7 1419 aa43.23■■■■■ 4.51
ATRAID-201ENST00000380171 TRHP20396 242 aaPredicted RBP43.14■■■■■ 4.5
ATRAID-201ENST00000380171 NUP153P49790 1475 aaKnown RBP43.13■■■■■ 4.49
ATRAID-201ENST00000380171 ASXL2Q76L83 1435 aa43.1■■■■■ 4.49
ATRAID-201ENST00000380171 HECW1Q76N89 1606 aa43.09■■■■■ 4.49
ATRAID-201ENST00000380171 ARID3CA6NKF2 412 aa43.07■■■■■ 4.49
ATRAID-201ENST00000380171 KIF13AQ9H1H9 1805 aa43.05■■■■■ 4.48
ATRAID-201ENST00000380171 PCF11O94913 1555 aaKnown RBP43.04■■■■■ 4.48
ATRAID-201ENST00000380171 ATP10BO94823 1461 aa43.04■■■■■ 4.48
ATRAID-201ENST00000380171 DIP2BQ9P265 1576 aa43.03■■■■■ 4.48
ATRAID-201ENST00000380171 ABCC10Q5T3U5 1492 aa43■■■■■ 4.47
ATRAID-201ENST00000380171 WDR7Q9Y4E6 1490 aa42.97■■■■■ 4.47
ATRAID-201ENST00000380171 CASKIN1Q8WXD9 1431 aa42.92■■■■■ 4.46
ATRAID-201ENST00000380171 ATP1B4Q9UN42 357 aaPredicted RBP42.92■■■■■ 4.46
ATRAID-201ENST00000380171 CDK13Q14004 1512 aaKnown RBP42.91■■■■■ 4.46
ATRAID-201ENST00000380171 FYCO1Q9BQS8 1478 aa42.9■■■■■ 4.46
ATRAID-201ENST00000380171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.9■■■■■ 4.46
ATRAID-201ENST00000380171 HNRNPUL2Q1KMD3 747 aaKnown RBP42.9■■■■■ 4.46
ATRAID-201ENST00000380171 LRRIQ1Q96JM4 1722 aa42.88■■■■■ 4.45
ATRAID-201ENST00000380171 EPRSP07814 1512 aaKnown RBP42.87■■■■■ 4.45
ATRAID-201ENST00000380171 FAM69CQ0P6D2 419 aa42.85■■■■■ 4.45
ATRAID-201ENST00000380171 GLI2P10070 1586 aa42.82■■■■■ 4.44
ATRAID-201ENST00000380171 CCDC18Q5T9S5 1454 aa42.77■■■■■ 4.44
ATRAID-201ENST00000380171 VPS8Q8N3P4 1428 aa42.7■■■■■ 4.43
ATRAID-201ENST00000380171 TSPOAP1O95153 1857 aa42.69■■■■■ 4.42
ATRAID-201ENST00000380171 KCNH8Q96L42 1107 aa42.69■■■■■ 4.42
ATRAID-201ENST00000380171 MAP3K4Q9Y6R4 1608 aa42.68■■■■■ 4.42
ATRAID-201ENST00000380171 PLEKHD1A6NEE1 506 aa42.66■■■■■ 4.42
ATRAID-201ENST00000380171 CFAP43Q8NDM7 1665 aa42.64■■■■■ 4.42
ATRAID-201ENST00000380171 CDK11AQ9UQ88 783 aaPredicted RBP42.59■■■■■ 4.41
ATRAID-201ENST00000380171 ABCA9Q8IUA7 1624 aa42.58■■■■■ 4.41
ATRAID-201ENST00000380171 PPRC1Q5VV67 1664 aaKnown RBP42.56■■■■■ 4.4
ATRAID-201ENST00000380171 TROQ12816 1431 aaPredicted RBP42.52■■■■■ 4.4
ATRAID-201ENST00000380171 KIF14Q15058 1648 aa42.5■■■■■ 4.39
ATRAID-201ENST00000380171 CD109Q6YHK3 1445 aa42.48■■■■■ 4.39
ATRAID-201ENST00000380171 MAGI3Q5TCQ9 1506 aa42.48■■■■■ 4.39
ATRAID-201ENST00000380171 TTC37Q6PGP7 1564 aa42.46■■■■■ 4.39
ATRAID-201ENST00000380171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.46■■■■■ 4.39
ATRAID-201ENST00000380171 TEX14Q8IWB6 1497 aa42.43■■■■■ 4.38
ATRAID-201ENST00000380171 TIAM1Q13009 1591 aa42.4■■■■■ 4.38
ATRAID-201ENST00000380171 EHBP1L1Q8N3D4 1523 aa42.33■■■■■ 4.37
ATRAID-201ENST00000380171 MTUS2Q5JR59 1369 aa42.32■■■■■ 4.37
ATRAID-201ENST00000380171 MYO5CQ9NQX4 1742 aa42.31■■■■■ 4.36
ATRAID-201ENST00000380171 KDM6BO15054 1643 aa42.28■■■■■ 4.36
ATRAID-201ENST00000380171 MAP3K1Q13233 1512 aa42.26■■■■■ 4.36
ATRAID-201ENST00000380171 CFAP74Q9C0B2 1584 aa42.21■■■■■ 4.35
ATRAID-201ENST00000380171 APLP2Q06481 763 aa42.15■■■■■ 4.34
ATRAID-201ENST00000380171 PREX2Q70Z35 1606 aa42.15■■■■■ 4.34
ATRAID-201ENST00000380171 LRRC9Q6ZRR7 1453 aa42.15■■■■■ 4.34
ATRAID-201ENST00000380171 NEO1Q92859 1461 aa42.15■■■■■ 4.34
ATRAID-201ENST00000380171 SUPT6HQ7KZ85 1726 aaKnown RBP42.15■■■■■ 4.34
ATRAID-201ENST00000380171 PLCH2O75038 1416 aa42.14■■■■■ 4.34
ATRAID-201ENST00000380171 ARAP3Q8WWN8 1544 aa42.14■■■■■ 4.34
ATRAID-201ENST00000380171 FANCAO15360 1455 aa42.13■■■■■ 4.34
ATRAID-201ENST00000380171 CDC42BPAQ5VT25 1732 aa42.12■■■■■ 4.33
ATRAID-201ENST00000380171 ARHGAP5Q13017 1502 aa42.1■■■■■ 4.33
ATRAID-201ENST00000380171 CDC42BPBQ9Y5S2 1711 aa42.09■■■■■ 4.33
ATRAID-201ENST00000380171 PHLDB1Q86UU1 1377 aa42.05■■■■■ 4.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms