RNA–Protein interactions for RNA: ENST00000379813.7

APTX-203, Transcript of aprataxin, humanhuman

TSL 5 BASIC

Gene APTX, Length 1,121 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-203ENST00000379813 TRIM41Q8WV44 630 aa21.3■■□□□ 1
APTX-203ENST00000379813 RIMBP3CA6NJZ7 1639 aa21.28■■□□□ 1
APTX-203ENST00000379813 RIMBP3BA6NNM3 1639 aa21.28■■□□□ 1
APTX-203ENST00000379813 RIMBP3Q9UFD9 1639 aa21.28■■□□□ 1
APTX-203ENST00000379813 CEP170Q5SW79 1584 aa21.27■■□□□ 1
APTX-203ENST00000379813 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
APTX-203ENST00000379813 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
APTX-203ENST00000379813 NUP160Q12769 1436 aa21.22■□□□□ 0.99
APTX-203ENST00000379813 CUL7Q14999 1698 aa21.16■□□□□ 0.98
APTX-203ENST00000379813 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
APTX-203ENST00000379813 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
APTX-203ENST00000379813 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
APTX-203ENST00000379813 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
APTX-203ENST00000379813 CYB5RLQ6IPT4 315 aa21.06■□□□□ 0.96
APTX-203ENST00000379813 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
APTX-203ENST00000379813 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
APTX-203ENST00000379813 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
APTX-203ENST00000379813 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
APTX-203ENST00000379813 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
APTX-203ENST00000379813 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
APTX-203ENST00000379813 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
APTX-203ENST00000379813 IQGAP2Q13576 1575 aa20.89■□□□□ 0.93
APTX-203ENST00000379813 EEA1Q15075 1411 aa20.84■□□□□ 0.93
APTX-203ENST00000379813 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
APTX-203ENST00000379813 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
APTX-203ENST00000379813 DISP1Q96F81 1524 aa20.81■□□□□ 0.92
APTX-203ENST00000379813 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
APTX-203ENST00000379813 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
APTX-203ENST00000379813 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
APTX-203ENST00000379813 KIF21BO75037 1637 aa20.74■□□□□ 0.91
APTX-203ENST00000379813 KIAA0556O60303 1618 aa20.72■□□□□ 0.91
APTX-203ENST00000379813 ADCY10Q96PN6 1610 aa20.7■□□□□ 0.9
APTX-203ENST00000379813 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
APTX-203ENST00000379813 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
APTX-203ENST00000379813 PTPRGP23470 1445 aa20.68■□□□□ 0.9
APTX-203ENST00000379813 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
APTX-203ENST00000379813 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
APTX-203ENST00000379813 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
APTX-203ENST00000379813 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
APTX-203ENST00000379813 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
APTX-203ENST00000379813 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
APTX-203ENST00000379813 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
APTX-203ENST00000379813 UACAQ9BZF9 1416 aa20.54■□□□□ 0.88
APTX-203ENST00000379813 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
APTX-203ENST00000379813 FHOD3Q2V2M9 1422 aa20.52■□□□□ 0.87
APTX-203ENST00000379813 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
APTX-203ENST00000379813 ABCA8O94911 1581 aa20.51■□□□□ 0.87
APTX-203ENST00000379813 HOXD11P31277 338 aaPredicted RBP20.49■□□□□ 0.87
APTX-203ENST00000379813 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
APTX-203ENST00000379813 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
APTX-203ENST00000379813 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
APTX-203ENST00000379813 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
APTX-203ENST00000379813 KDM5BQ9UGL1 1544 aa20.44■□□□□ 0.86
APTX-203ENST00000379813 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
APTX-203ENST00000379813 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
APTX-203ENST00000379813 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
APTX-203ENST00000379813 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
APTX-203ENST00000379813 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
APTX-203ENST00000379813 DIP2BQ9P265 1576 aa20.41■□□□□ 0.86
APTX-203ENST00000379813 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
APTX-203ENST00000379813 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
APTX-203ENST00000379813 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
APTX-203ENST00000379813 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
APTX-203ENST00000379813 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
APTX-203ENST00000379813 ATP10BO94823 1461 aa20.35■□□□□ 0.85
APTX-203ENST00000379813 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
APTX-203ENST00000379813 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
APTX-203ENST00000379813 CACNB1Q02641 598 aaPredicted RBP20.29■□□□□ 0.84
APTX-203ENST00000379813 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
APTX-203ENST00000379813 WDR7Q9Y4E6 1490 aa20.27■□□□□ 0.84
APTX-203ENST00000379813 CLIP1P30622 1438 aa20.26■□□□□ 0.83
APTX-203ENST00000379813 TSPOAP1O95153 1857 aa20.25■□□□□ 0.83
APTX-203ENST00000379813 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
APTX-203ENST00000379813 PPRC1Q5VV67 1664 aaKnown RBP20.23■□□□□ 0.83
APTX-203ENST00000379813 GLI2P10070 1586 aa20.23■□□□□ 0.83
APTX-203ENST00000379813 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
APTX-203ENST00000379813 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
APTX-203ENST00000379813 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
APTX-203ENST00000379813 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
APTX-203ENST00000379813 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
APTX-203ENST00000379813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
APTX-203ENST00000379813 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
APTX-203ENST00000379813 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
APTX-203ENST00000379813 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
APTX-203ENST00000379813 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
APTX-203ENST00000379813 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
APTX-203ENST00000379813 COL17A1Q9UMD9 1497 aaPredicted RBP20.09■□□□□ 0.81
APTX-203ENST00000379813 CD109Q6YHK3 1445 aa20.08■□□□□ 0.8
APTX-203ENST00000379813 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
APTX-203ENST00000379813 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
APTX-203ENST00000379813 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
APTX-203ENST00000379813 RNF39Q9H2S5 420 aa20.07■□□□□ 0.8
APTX-203ENST00000379813 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
APTX-203ENST00000379813 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
APTX-203ENST00000379813 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
APTX-203ENST00000379813 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
APTX-203ENST00000379813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.8
APTX-203ENST00000379813 KDM6BO15054 1643 aa20.03■□□□□ 0.8
APTX-203ENST00000379813 KIF14Q15058 1648 aa20.03■□□□□ 0.8
APTX-203ENST00000379813 TROQ12816 1431 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms