RNA–Protein interactions for RNA: ENST00000379412.9

LDHA-203, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LDHA, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-203ENST00000379412 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
LDHA-203ENST00000379412 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
LDHA-203ENST00000379412 PBRM1Q86U86 1689 aa22.41■■□□□ 1.18
LDHA-203ENST00000379412 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.172e-8■■■■□ 26.4
LDHA-203ENST00000379412 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
LDHA-203ENST00000379412 ADAMTS12P58397 1594 aa22.35■■□□□ 1.17
LDHA-203ENST00000379412 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
LDHA-203ENST00000379412 FYCO1Q9BQS8 1478 aa22.31■■□□□ 1.16
LDHA-203ENST00000379412 TIAM1Q13009 1591 aa22.31■■□□□ 1.16
LDHA-203ENST00000379412 KANK4Q5T7N3 995 aaPredicted RBP22.3■■□□□ 1.16
LDHA-203ENST00000379412 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
LDHA-203ENST00000379412 CASKIN1Q8WXD9 1431 aa22.29■■□□□ 1.16
LDHA-203ENST00000379412 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
LDHA-203ENST00000379412 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
LDHA-203ENST00000379412 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
LDHA-203ENST00000379412 RRBP1Q9P2E9 1410 aaKnown RBP22.25■■□□□ 1.15
LDHA-203ENST00000379412 PCF11O94913 1555 aaKnown RBP22.24■■□□□ 1.15
LDHA-203ENST00000379412 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
LDHA-203ENST00000379412 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
LDHA-203ENST00000379412 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
LDHA-203ENST00000379412 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
LDHA-203ENST00000379412 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
LDHA-203ENST00000379412 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
LDHA-203ENST00000379412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
LDHA-203ENST00000379412 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
LDHA-203ENST00000379412 KIAA0586Q9BVV6 1533 aa22.16■■□□□ 1.14
LDHA-203ENST00000379412 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
LDHA-203ENST00000379412 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
LDHA-203ENST00000379412 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
LDHA-203ENST00000379412 UGGT2Q9NYU1 1516 aa22.14■■□□□ 1.13
LDHA-203ENST00000379412 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
LDHA-203ENST00000379412 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
LDHA-203ENST00000379412 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
LDHA-203ENST00000379412 CCDC18Q5T9S5 1454 aa22.04■■□□□ 1.12
LDHA-203ENST00000379412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.01■■□□□ 1.11
LDHA-203ENST00000379412 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
LDHA-203ENST00000379412 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
LDHA-203ENST00000379412 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
LDHA-203ENST00000379412 NUP160Q12769 1436 aa21.98■■□□□ 1.11
LDHA-203ENST00000379412 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
LDHA-203ENST00000379412 KIAA0556O60303 1618 aa21.96■■□□□ 1.11
LDHA-203ENST00000379412 EHBP1L1Q8N3D4 1523 aa21.95■■□□□ 1.1
LDHA-203ENST00000379412 DISP1Q96F81 1524 aa21.95■■□□□ 1.1
LDHA-203ENST00000379412 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
LDHA-203ENST00000379412 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
LDHA-203ENST00000379412 EPRSP07814 1512 aaKnown RBP21.89■■□□□ 1.09
LDHA-203ENST00000379412 LRRIQ1Q96JM4 1722 aa21.88■■□□□ 1.09
LDHA-203ENST00000379412 FBLN2P98095 1184 aa21.88■■□□□ 1.09
LDHA-203ENST00000379412 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
LDHA-203ENST00000379412 FGD6Q6ZV73 1430 aa21.87■■□□□ 1.09
LDHA-203ENST00000379412 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
LDHA-203ENST00000379412 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
LDHA-203ENST00000379412 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
LDHA-203ENST00000379412 MYOM3Q5VTT5 1437 aa21.83■■□□□ 1.09
LDHA-203ENST00000379412 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
LDHA-203ENST00000379412 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
LDHA-203ENST00000379412 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
LDHA-203ENST00000379412 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
LDHA-203ENST00000379412 ITGAEP38570 1179 aa21.78■■□□□ 1.08
LDHA-203ENST00000379412 CDK11AQ9UQ88 783 aaPredicted RBP21.78■■□□□ 1.08
LDHA-203ENST00000379412 MAGI3Q5TCQ9 1506 aa21.76■■□□□ 1.07
LDHA-203ENST00000379412 NUP153P49790 1475 aaKnown RBP21.76■■□□□ 1.07
LDHA-203ENST00000379412 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
LDHA-203ENST00000379412 CDK13Q14004 1512 aaKnown RBP21.74■■□□□ 1.07
LDHA-203ENST00000379412 MIA2Q96PC5 1412 aa21.73■■□□□ 1.07
LDHA-203ENST00000379412 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.07
LDHA-203ENST00000379412 PTPN23Q9H3S7 1636 aa21.68■■□□□ 1.06
LDHA-203ENST00000379412 PLB1Q6P1J6 1458 aa21.64■■□□□ 1.06
LDHA-203ENST00000379412 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.05
LDHA-203ENST00000379412 CHD1O14646 1710 aa21.63■■□□□ 1.05
LDHA-203ENST00000379412 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
LDHA-203ENST00000379412 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
LDHA-203ENST00000379412 ABCA8O94911 1581 aa21.63■■□□□ 1.05
LDHA-203ENST00000379412 SHROOM2Q13796 1616 aa21.59■■□□□ 1.05
LDHA-203ENST00000379412 AKNAQ7Z591 1439 aa21.59■■□□□ 1.05
LDHA-203ENST00000379412 PTPRGP23470 1445 aa21.58■■□□□ 1.05
LDHA-203ENST00000379412 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
LDHA-203ENST00000379412 PTPRKQ15262 1439 aa21.56■■□□□ 1.04
LDHA-203ENST00000379412 ARID3CA6NKF2 412 aa21.56■■□□□ 1.04
LDHA-203ENST00000379412 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
LDHA-203ENST00000379412 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
LDHA-203ENST00000379412 PLEKHD1A6NEE1 506 aa21.53■■□□□ 1.04
LDHA-203ENST00000379412 NAIPQ13075 1403 aa21.52■■□□□ 1.04
LDHA-203ENST00000379412 MAPKBP1O60336 1514 aa21.52■■□□□ 1.04
LDHA-203ENST00000379412 ATP10BO94823 1461 aa21.5■■□□□ 1.03
LDHA-203ENST00000379412 TIMELESSQ9UNS1 1208 aa21.5■■□□□ 1.03
LDHA-203ENST00000379412 ITSN2Q9NZM3 1697 aa21.49■■□□□ 1.03
LDHA-203ENST00000379412 UACAQ9BZF9 1416 aa21.49■■□□□ 1.03
LDHA-203ENST00000379412 ROCK1Q13464 1354 aa21.47■■□□□ 1.03
LDHA-203ENST00000379412 CLASP1Q7Z460 1538 aa21.46■■□□□ 1.03
LDHA-203ENST00000379412 GPATCH8Q9UKJ3 1502 aaKnown RBP21.44■■□□□ 1.02
LDHA-203ENST00000379412 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
LDHA-203ENST00000379412 KIF14Q15058 1648 aa21.44■■□□□ 1.02
LDHA-203ENST00000379412 DAPK1P53355 1430 aa21.44■■□□□ 1.02
LDHA-203ENST00000379412 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
LDHA-203ENST00000379412 CFDP1Q9UEE9 299 aaPredicted RBP21.43■■□□□ 1.02
LDHA-203ENST00000379412 DIEXFQ68CQ4 756 aaKnown RBP21.41■■□□□ 1.02
LDHA-203ENST00000379412 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
LDHA-203ENST00000379412 ABCC5O15440 1437 aa21.39■■□□□ 1.02
LDHA-203ENST00000379412 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms