RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 CYB5RLQ6IPT4 315 aa40.35■■■■■ 4.05
SDHAF1-201ENST00000378887 PRXQ9BXM0 1461 aa40.32■■■■■ 4.04
SDHAF1-201ENST00000378887 RAPGEF2Q9Y4G8 1499 aa40.31■■■■■ 4.04
SDHAF1-201ENST00000378887 CHIC1Q5VXU3 224 aa40.26■■■■■ 4.04
SDHAF1-201ENST00000378887 JPH4Q96JJ6 628 aa40.25■■■■■ 4.03
SDHAF1-201ENST00000378887 PRG4Q92954 1404 aaPredicted RBP40.25■■■■■ 4.03
SDHAF1-201ENST00000378887 IQGAP2Q13576 1575 aa40.13■■■■■ 4.01
SDHAF1-201ENST00000378887 EEA1Q15075 1411 aa40.06■■■■■ 4
SDHAF1-201ENST00000378887 CTTNBP2Q8WZ74 1663 aa40.01■■■■■ 4
SDHAF1-201ENST00000378887 UGGT2Q9NYU1 1516 aa40.01■■■■□ 3.99
SDHAF1-201ENST00000378887 CSRNP3Q8WYN3 585 aa39.99■■■■□ 3.99
SDHAF1-201ENST00000378887 DISP1Q96F81 1524 aa39.99■■■■□ 3.99
SDHAF1-201ENST00000378887 KIAA0556O60303 1618 aa39.82■■■■□ 3.96
SDHAF1-201ENST00000378887 KIF21BO75037 1637 aa39.82■■■■□ 3.96
SDHAF1-201ENST00000378887 ADCY10Q96PN6 1610 aa39.82■■■■□ 3.96
SDHAF1-201ENST00000378887 CARMIL2Q6F5E8 1435 aa39.74■■■■□ 3.95
SDHAF1-201ENST00000378887 TNIKQ9UKE5 1360 aa39.73■■■■□ 3.95
SDHAF1-201ENST00000378887 FAM9AQ8IZU1 332 aaPredicted RBP39.71■■■■□ 3.95
SDHAF1-201ENST00000378887 PTPRGP23470 1445 aa39.69■■■■□ 3.94
SDHAF1-201ENST00000378887 SAMD9Q5K651 1589 aa39.6■■■■□ 3.93
SDHAF1-201ENST00000378887 UHRF1BP1LA0JNW5 1464 aa39.57■■■■□ 3.93
SDHAF1-201ENST00000378887 GOLGA3Q08378 1498 aa39.54■■■■□ 3.92
SDHAF1-201ENST00000378887 MAPKBP1O60336 1514 aa39.54■■■■□ 3.92
SDHAF1-201ENST00000378887 ABCC2Q92887 1545 aa39.5■■■■□ 3.91
SDHAF1-201ENST00000378887 UACAQ9BZF9 1416 aa39.48■■■■□ 3.91
SDHAF1-201ENST00000378887 KIF13AQ9H1H9 1805 aa39.45■■■■□ 3.91
SDHAF1-201ENST00000378887 ABCA8O94911 1581 aa39.45■■■■□ 3.91
SDHAF1-201ENST00000378887 PLB1Q6P1J6 1458 aa39.41■■■■□ 3.9
SDHAF1-201ENST00000378887 KDM5BQ9UGL1 1544 aa39.4■■■■□ 3.9
SDHAF1-201ENST00000378887 TTBK1Q5TCY1 1321 aaPredicted RBP39.37■■■■□ 3.89
SDHAF1-201ENST00000378887 TRHP20396 242 aaPredicted RBP39.36■■■■□ 3.89
SDHAF1-201ENST00000378887 DIP2BQ9P265 1576 aa39.33■■■■□ 3.89
SDHAF1-201ENST00000378887 ABCC10Q5T3U5 1492 aa39.32■■■■□ 3.89
SDHAF1-201ENST00000378887 ZCCHC11Q5TAX3 1644 aaKnown RBP39.29■■■■□ 3.88
SDHAF1-201ENST00000378887 EFCAB5A4FU69 1503 aa39.25■■■■□ 3.87
SDHAF1-201ENST00000378887 P3H3Q8IVL6 736 aa39.21■■■■□ 3.87
SDHAF1-201ENST00000378887 FHOD3Q2V2M9 1422 aa39.21■■■■□ 3.87
SDHAF1-201ENST00000378887 ASXL2Q76L83 1435 aa39.2■■■■□ 3.87
SDHAF1-201ENST00000378887 NPM1P06748 294 aaKnown RBP eCLIP39.18■■■■□ 3.86
SDHAF1-201ENST00000378887 ARHGAP35Q9NRY4 1499 aa39.14■■■■□ 3.86
SDHAF1-201ENST00000378887 EHMT2Q96KQ7 1210 aa39.14■■■■□ 3.86
SDHAF1-201ENST00000378887 RAPGEF6Q8TEU7 1601 aa39.11■■■■□ 3.85
SDHAF1-201ENST00000378887 GLI2P10070 1586 aa39.08■■■■□ 3.85
SDHAF1-201ENST00000378887 UBTFP17480 764 aaKnown RBP39.08■■■■□ 3.85
SDHAF1-201ENST00000378887 NUP153P49790 1475 aaKnown RBP39.05■■■■□ 3.84
SDHAF1-201ENST00000378887 ATP10BO94823 1461 aa39.05■■■■□ 3.84
SDHAF1-201ENST00000378887 RANGAP1P46060 587 aaPredicted RBP39.03■■■■□ 3.84
SDHAF1-201ENST00000378887 FAM69CQ0P6D2 419 aa39.02■■■■□ 3.84
SDHAF1-201ENST00000378887 EPRSP07814 1512 aaKnown RBP39.02■■■■□ 3.84
SDHAF1-201ENST00000378887 PPRC1Q5VV67 1664 aaKnown RBP39■■■■□ 3.83
SDHAF1-201ENST00000378887 WDR7Q9Y4E6 1490 aa38.98■■■■□ 3.83
SDHAF1-201ENST00000378887 MAP3K4Q9Y6R4 1608 aa38.92■■■■□ 3.82
SDHAF1-201ENST00000378887 TSPOAP1O95153 1857 aa38.83■■■■□ 3.81
SDHAF1-201ENST00000378887 ARID3CA6NKF2 412 aa38.78■■■■□ 3.8
SDHAF1-201ENST00000378887 FMN1Q68DA7 1419 aa38.78■■■■□ 3.8
SDHAF1-201ENST00000378887 LRRIQ1Q96JM4 1722 aa38.76■■■■□ 3.8
SDHAF1-201ENST00000378887 CDK13Q14004 1512 aaKnown RBP38.72■■■■□ 3.79
SDHAF1-201ENST00000378887 CFAP43Q8NDM7 1665 aa38.71■■■■□ 3.79
SDHAF1-201ENST00000378887 CLIP1P30622 1438 aa38.71■■■■□ 3.79
SDHAF1-201ENST00000378887 HECW1Q76N89 1606 aa38.68■■■■□ 3.78
SDHAF1-201ENST00000378887 ABCA9Q8IUA7 1624 aa38.67■■■■□ 3.78
SDHAF1-201ENST00000378887 PCF11O94913 1555 aaKnown RBP38.65■■■■□ 3.78
SDHAF1-201ENST00000378887 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.77
SDHAF1-201ENST00000378887 COL17A1Q9UMD9 1497 aaPredicted RBP38.6■■■■□ 3.77
SDHAF1-201ENST00000378887 CASKIN1Q8WXD9 1431 aa38.59■■■■□ 3.77
SDHAF1-201ENST00000378887 KDM6BO15054 1643 aa38.56■■■■□ 3.76
SDHAF1-201ENST00000378887 CEP162Q5TB80 1403 aa38.56■■■■□ 3.76
SDHAF1-201ENST00000378887 KCNH8Q96L42 1107 aa38.56■■■■□ 3.76
SDHAF1-201ENST00000378887 CD109Q6YHK3 1445 aa38.55■■■■□ 3.76
SDHAF1-201ENST00000378887 LOC105371045A0A1W2PR82 267 aa38.55■■■■□ 3.76
SDHAF1-201ENST00000378887 TEX14Q8IWB6 1497 aa38.5■■■■□ 3.75
SDHAF1-201ENST00000378887 FYCO1Q9BQS8 1478 aa38.48■■■■□ 3.75
SDHAF1-201ENST00000378887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.48■■■■□ 3.75
SDHAF1-201ENST00000378887 TTC37Q6PGP7 1564 aa38.46■■■■□ 3.75
SDHAF1-201ENST00000378887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.4■■■■□ 3.74
SDHAF1-201ENST00000378887 HNRNPUL2Q1KMD3 747 aaKnown RBP38.4■■■■□ 3.74
SDHAF1-201ENST00000378887 PLEKHD1A6NEE1 506 aa38.39■■■■□ 3.74
SDHAF1-201ENST00000378887 KIF14Q15058 1648 aa38.38■■■■□ 3.73
SDHAF1-201ENST00000378887 CCDC18Q5T9S5 1454 aa38.36■■■■□ 3.73
SDHAF1-201ENST00000378887 TROQ12816 1431 aaPredicted RBP38.34■■■■□ 3.73
SDHAF1-201ENST00000378887 ARAP3Q8WWN8 1544 aa38.31■■■■□ 3.72
SDHAF1-201ENST00000378887 ATP1B4Q9UN42 357 aaPredicted RBP38.26■■■■□ 3.72
SDHAF1-201ENST00000378887 NEO1Q92859 1461 aa38.26■■■■□ 3.72
SDHAF1-201ENST00000378887 FRMPD1Q5SYB0 1578 aa38.21■■■■□ 3.71
SDHAF1-201ENST00000378887 PLCH2O75038 1416 aa38.17■■■■□ 3.7
SDHAF1-201ENST00000378887 PHLDB1Q86UU1 1377 aa38.16■■■■□ 3.7
SDHAF1-201ENST00000378887 MYO5CQ9NQX4 1742 aa38.14■■■■□ 3.7
SDHAF1-201ENST00000378887 CDK11AQ9UQ88 783 aaPredicted RBP38.13■■■■□ 3.69
SDHAF1-201ENST00000378887 FANCAO15360 1455 aa38.13■■■■□ 3.69
SDHAF1-201ENST00000378887 VPS8Q8N3P4 1428 aa38.12■■■■□ 3.69
SDHAF1-201ENST00000378887 CFAP74Q9C0B2 1584 aa38.09■■■■□ 3.69
SDHAF1-201ENST00000378887 RICTORQ6R327 1708 aa38.07■■■■□ 3.69
SDHAF1-201ENST00000378887 CDC42BPBQ9Y5S2 1711 aa38.07■■■■□ 3.69
SDHAF1-201ENST00000378887 AKNAQ7Z591 1439 aa38.07■■■■□ 3.69
SDHAF1-201ENST00000378887 PREX2Q70Z35 1606 aa38.04■■■■□ 3.68
SDHAF1-201ENST00000378887 CDC42BPAQ5VT25 1732 aa38.03■■■■□ 3.68
SDHAF1-201ENST00000378887 TIAM1Q13009 1591 aa37.97■■■■□ 3.67
SDHAF1-201ENST00000378887 RAPGEF3O95398 923 aa37.96■■■■□ 3.67
SDHAF1-201ENST00000378887 EHBP1L1Q8N3D4 1523 aa37.94■■■■□ 3.66
SDHAF1-201ENST00000378887 ZMYM4Q5VZL5 1548 aa37.92■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms