RNA–Protein interactions for RNA: ENST00000378654.8

SUCLA2-201, Transcript of succinate-CoA ligase ADP-forming beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLA2, Length 2,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLA2-201ENST00000378654 TIAM1Q13009 1591 aa23.98■■□□□ 1.43
SUCLA2-201ENST00000378654 CCNB3Q8WWL7 1395 aa23.94■■□□□ 1.42
SUCLA2-201ENST00000378654 CUL7Q14999 1698 aa23.94■■□□□ 1.42
SUCLA2-201ENST00000378654 DHX57Q6P158 1386 aaKnown RBP23.93■■□□□ 1.42
SUCLA2-201ENST00000378654 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
SUCLA2-201ENST00000378654 CLSPNQ9HAW4 1339 aa23.92■■□□□ 1.42
SUCLA2-201ENST00000378654 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.42
SUCLA2-201ENST00000378654 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.42
SUCLA2-201ENST00000378654 PCF11O94913 1555 aaKnown RBP23.87■■□□□ 1.41
SUCLA2-201ENST00000378654 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
SUCLA2-201ENST00000378654 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
SUCLA2-201ENST00000378654 CTTNBP2Q8WZ74 1663 aa23.85■■□□□ 1.41
SUCLA2-201ENST00000378654 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
SUCLA2-201ENST00000378654 EFCAB5A4FU69 1503 aa23.84■■□□□ 1.41
SUCLA2-201ENST00000378654 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
SUCLA2-201ENST00000378654 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
SUCLA2-201ENST00000378654 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
SUCLA2-201ENST00000378654 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
SUCLA2-201ENST00000378654 FHOD3Q2V2M9 1422 aa23.8■■□□□ 1.4
SUCLA2-201ENST00000378654 NEUROD1Q13562 356 aa23.77■■□□□ 1.4
SUCLA2-201ENST00000378654 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.39
SUCLA2-201ENST00000378654 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
SUCLA2-201ENST00000378654 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
SUCLA2-201ENST00000378654 PHLDB1Q86UU1 1377 aa23.75■■□□□ 1.39
SUCLA2-201ENST00000378654 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
SUCLA2-201ENST00000378654 ITGAEP38570 1179 aa23.71■■□□□ 1.39
SUCLA2-201ENST00000378654 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
SUCLA2-201ENST00000378654 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.38
SUCLA2-201ENST00000378654 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
SUCLA2-201ENST00000378654 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
SUCLA2-201ENST00000378654 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
SUCLA2-201ENST00000378654 FMN1Q68DA7 1419 aa23.64■■□□□ 1.37
SUCLA2-201ENST00000378654 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.37
SUCLA2-201ENST00000378654 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
SUCLA2-201ENST00000378654 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
SUCLA2-201ENST00000378654 MAPKBP1O60336 1514 aa23.6■■□□□ 1.37
SUCLA2-201ENST00000378654 SETD5Q9C0A6 1442 aa23.6■■□□□ 1.37
SUCLA2-201ENST00000378654 MIER1Q8N108 512 aa23.6■■□□□ 1.37
SUCLA2-201ENST00000378654 FAM50AQ14320 339 aaKnown RBP23.56■■□□□ 1.36
SUCLA2-201ENST00000378654 GTF3C3Q9Y5Q9 886 aa23.55■■□□□ 1.36
SUCLA2-201ENST00000378654 LRRIQ1Q96JM4 1722 aa23.54■■□□□ 1.36
SUCLA2-201ENST00000378654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.53■■□□□ 1.36
SUCLA2-201ENST00000378654 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
SUCLA2-201ENST00000378654 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
SUCLA2-201ENST00000378654 FGD6Q6ZV73 1430 aa23.47■■□□□ 1.35
SUCLA2-201ENST00000378654 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
SUCLA2-201ENST00000378654 YTHDC1Q96MU7 727 aaKnown RBP23.44■■□□□ 1.34
SUCLA2-201ENST00000378654 ADAMTS12P58397 1594 aa23.43■■□□□ 1.34
SUCLA2-201ENST00000378654 EHBP1L1Q8N3D4 1523 aa23.39■■□□□ 1.34
SUCLA2-201ENST00000378654 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
SUCLA2-201ENST00000378654 NCOA2Q15596 1464 aa23.38■■□□□ 1.33
SUCLA2-201ENST00000378654 SUPT6HQ7KZ85 1726 aaKnown RBP23.38■■□□□ 1.33
SUCLA2-201ENST00000378654 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
SUCLA2-201ENST00000378654 FBLN2P98095 1184 aa23.33■■□□□ 1.33
SUCLA2-201ENST00000378654 CCDC18Q5T9S5 1454 aa23.33■■□□□ 1.33
SUCLA2-201ENST00000378654 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
SUCLA2-201ENST00000378654 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
SUCLA2-201ENST00000378654 HECW1Q76N89 1606 aa23.31■■□□□ 1.32
SUCLA2-201ENST00000378654 UGGT2Q9NYU1 1516 aa23.31■■□□□ 1.32
SUCLA2-201ENST00000378654 PTPRKQ15262 1439 aa23.31■■□□□ 1.32
SUCLA2-201ENST00000378654 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
SUCLA2-201ENST00000378654 HFM1A2PYH4 1435 aa23.29■■□□□ 1.32
SUCLA2-201ENST00000378654 PTPN23Q9H3S7 1636 aa23.28■■□□□ 1.32
SUCLA2-201ENST00000378654 MAGI1Q96QZ7 1491 aaPredicted RBP23.25■■□□□ 1.31
SUCLA2-201ENST00000378654 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
SUCLA2-201ENST00000378654 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
SUCLA2-201ENST00000378654 CHD1O14646 1710 aa23.22■■□□□ 1.31
SUCLA2-201ENST00000378654 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
SUCLA2-201ENST00000378654 SYNJ2O15056 1496 aa23.22■■□□□ 1.31
SUCLA2-201ENST00000378654 NAIPQ13075 1403 aa23.21■■□□□ 1.31
SUCLA2-201ENST00000378654 UACAQ9BZF9 1416 aa23.21■■□□□ 1.31
SUCLA2-201ENST00000378654 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
SUCLA2-201ENST00000378654 TCOF1Q13428 1488 aaKnown RBP23.19■■□□□ 1.3
SUCLA2-201ENST00000378654 CDK13Q14004 1512 aaKnown RBP23.18■■□□□ 1.3
SUCLA2-201ENST00000378654 CEP170Q5SW79 1584 aa23.16■■□□□ 1.3
SUCLA2-201ENST00000378654 KIAA0556O60303 1618 aa23.14■■□□□ 1.3
SUCLA2-201ENST00000378654 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.3
SUCLA2-201ENST00000378654 GCC2Q8IWJ2 1684 aa23.12■■□□□ 1.29
SUCLA2-201ENST00000378654 DISP1Q96F81 1524 aa23.12■■□□□ 1.29
SUCLA2-201ENST00000378654 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
SUCLA2-201ENST00000378654 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
SUCLA2-201ENST00000378654 AKNAQ7Z591 1439 aa23.07■■□□□ 1.28
SUCLA2-201ENST00000378654 TONSLQ96HA7 1378 aa23.05■■□□□ 1.28
SUCLA2-201ENST00000378654 NUP160Q12769 1436 aa23.04■■□□□ 1.28
SUCLA2-201ENST00000378654 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
SUCLA2-201ENST00000378654 RAPGEF6Q8TEU7 1601 aa23.02■■□□□ 1.28
SUCLA2-201ENST00000378654 ARID3CA6NKF2 412 aa23.02■■□□□ 1.28
SUCLA2-201ENST00000378654 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
SUCLA2-201ENST00000378654 KDM6BO15054 1643 aa23■■□□□ 1.27
SUCLA2-201ENST00000378654 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
SUCLA2-201ENST00000378654 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
SUCLA2-201ENST00000378654 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
SUCLA2-201ENST00000378654 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
SUCLA2-201ENST00000378654 DNMT1P26358 1616 aaKnown RBP22.92■■□□□ 1.26
SUCLA2-201ENST00000378654 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
SUCLA2-201ENST00000378654 DAPK1P53355 1430 aa22.92■■□□□ 1.26
SUCLA2-201ENST00000378654 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
SUCLA2-201ENST00000378654 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
SUCLA2-201ENST00000378654 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
SUCLA2-201ENST00000378654 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms