RNA–Protein interactions for RNA: ENST00000378654.8

SUCLA2-201, Transcript of succinate-CoA ligase ADP-forming beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLA2, Length 2,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLA2-201ENST00000378654 NISCHQ9Y2I1 1504 aa34.19■■■■□ 3.06
SUCLA2-201ENST00000378654 CCDC180Q9P1Z9 1646 aa29.28■■■□□ 2.28
SUCLA2-201ENST00000378654 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
SUCLA2-201ENST00000378654 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
SUCLA2-201ENST00000378654 ABCC9O60706 1549 aa28.38■■■□□ 2.13
SUCLA2-201ENST00000378654 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
SUCLA2-201ENST00000378654 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
SUCLA2-201ENST00000378654 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
SUCLA2-201ENST00000378654 MYO15BQ96JP2 1530 aa27.43■■□□□ 1.98
SUCLA2-201ENST00000378654 NACADO15069 1562 aa27.37■■□□□ 1.97
SUCLA2-201ENST00000378654 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
SUCLA2-201ENST00000378654 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
SUCLA2-201ENST00000378654 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
SUCLA2-201ENST00000378654 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
SUCLA2-201ENST00000378654 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
SUCLA2-201ENST00000378654 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
SUCLA2-201ENST00000378654 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
SUCLA2-201ENST00000378654 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
SUCLA2-201ENST00000378654 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
SUCLA2-201ENST00000378654 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
SUCLA2-201ENST00000378654 WIZO95785 1651 aa26.38■■□□□ 1.81
SUCLA2-201ENST00000378654 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
SUCLA2-201ENST00000378654 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
SUCLA2-201ENST00000378654 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
SUCLA2-201ENST00000378654 HRCP23327 699 aa26.13■■□□□ 1.77
SUCLA2-201ENST00000378654 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
SUCLA2-201ENST00000378654 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
SUCLA2-201ENST00000378654 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
SUCLA2-201ENST00000378654 FAM9AQ8IZU1 332 aaPredicted RBP25.93■■□□□ 1.74
SUCLA2-201ENST00000378654 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
SUCLA2-201ENST00000378654 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
SUCLA2-201ENST00000378654 TRIM26Q12899 539 aaPredicted RBP25.82■■□□□ 1.72
SUCLA2-201ENST00000378654 ABCC8Q09428 1581 aa25.68■■□□□ 1.7
SUCLA2-201ENST00000378654 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
SUCLA2-201ENST00000378654 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
SUCLA2-201ENST00000378654 EHMT2Q96KQ7 1210 aa25.63■■□□□ 1.69
SUCLA2-201ENST00000378654 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
SUCLA2-201ENST00000378654 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
SUCLA2-201ENST00000378654 PPARGC1BQ86YN6 1023 aaKnown RBP25.52■■□□□ 1.68
SUCLA2-201ENST00000378654 SOGA1O94964 1423 aa25.38■■□□□ 1.65
SUCLA2-201ENST00000378654 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
SUCLA2-201ENST00000378654 NCAPD3P42695 1498 aa25.33■■□□□ 1.64
SUCLA2-201ENST00000378654 EEA1Q15075 1411 aa25.32■■□□□ 1.64
SUCLA2-201ENST00000378654 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
SUCLA2-201ENST00000378654 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
SUCLA2-201ENST00000378654 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
SUCLA2-201ENST00000378654 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
SUCLA2-201ENST00000378654 CEP162Q5TB80 1403 aa25.2■■□□□ 1.62
SUCLA2-201ENST00000378654 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
SUCLA2-201ENST00000378654 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
SUCLA2-201ENST00000378654 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
SUCLA2-201ENST00000378654 GOLGA3Q08378 1498 aa25.1■■□□□ 1.61
SUCLA2-201ENST00000378654 KIF21BO75037 1637 aa25.02■■□□□ 1.6
SUCLA2-201ENST00000378654 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
SUCLA2-201ENST00000378654 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
SUCLA2-201ENST00000378654 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
SUCLA2-201ENST00000378654 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
SUCLA2-201ENST00000378654 NESP48681 1621 aa24.85■■□□□ 1.57
SUCLA2-201ENST00000378654 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
SUCLA2-201ENST00000378654 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
SUCLA2-201ENST00000378654 CLIP1P30622 1438 aa24.77■■□□□ 1.56
SUCLA2-201ENST00000378654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
SUCLA2-201ENST00000378654 CFTRP13569 1480 aa24.74■■□□□ 1.55
SUCLA2-201ENST00000378654 CUX1P39880 1505 aa24.73■■□□□ 1.55
SUCLA2-201ENST00000378654 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
SUCLA2-201ENST00000378654 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
SUCLA2-201ENST00000378654 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
SUCLA2-201ENST00000378654 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
SUCLA2-201ENST00000378654 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
SUCLA2-201ENST00000378654 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
SUCLA2-201ENST00000378654 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
SUCLA2-201ENST00000378654 LAMC3Q9Y6N6 1575 aa24.51■■□□□ 1.51
SUCLA2-201ENST00000378654 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
SUCLA2-201ENST00000378654 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
SUCLA2-201ENST00000378654 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
SUCLA2-201ENST00000378654 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
SUCLA2-201ENST00000378654 APLP2Q06481 763 aa24.41■■□□□ 1.5
SUCLA2-201ENST00000378654 CUX2O14529 1486 aa24.32■■□□□ 1.48
SUCLA2-201ENST00000378654 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
SUCLA2-201ENST00000378654 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
SUCLA2-201ENST00000378654 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
SUCLA2-201ENST00000378654 IGF1RP08069 1367 aa24.26■■□□□ 1.47
SUCLA2-201ENST00000378654 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
SUCLA2-201ENST00000378654 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
SUCLA2-201ENST00000378654 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
SUCLA2-201ENST00000378654 KANK4Q5T7N3 995 aaPredicted RBP24.16■■□□□ 1.46
SUCLA2-201ENST00000378654 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
SUCLA2-201ENST00000378654 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
SUCLA2-201ENST00000378654 TOPBP1Q92547 1522 aa24.14■■□□□ 1.46
SUCLA2-201ENST00000378654 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
SUCLA2-201ENST00000378654 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
SUCLA2-201ENST00000378654 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
SUCLA2-201ENST00000378654 RRBP1Q9P2E9 1410 aaKnown RBP24.09■■□□□ 1.45
SUCLA2-201ENST00000378654 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
SUCLA2-201ENST00000378654 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
SUCLA2-201ENST00000378654 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
SUCLA2-201ENST00000378654 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
SUCLA2-201ENST00000378654 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
SUCLA2-201ENST00000378654 WDR62O43379 1518 aa24.01■■□□□ 1.43
SUCLA2-201ENST00000378654 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms