RNA–Protein interactions for RNA: ENST00000378609.8

GNB1-201, Transcript of G protein subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNB1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-201ENST00000378609 GAPVD1Q14C86 1478 aa29.25■■■□□ 2.27
GNB1-201ENST00000378609 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
GNB1-201ENST00000378609 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
GNB1-201ENST00000378609 CCNB3Q8WWL7 1395 aa29.07■■■□□ 2.24
GNB1-201ENST00000378609 PHLDB1Q86UU1 1377 aa29.04■■■□□ 2.24
GNB1-201ENST00000378609 DIEXFQ68CQ4 756 aaKnown RBP29.01■■■□□ 2.24
GNB1-201ENST00000378609 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
GNB1-201ENST00000378609 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
GNB1-201ENST00000378609 PCF11O94913 1555 aaKnown RBP28.94■■■□□ 2.22
GNB1-201ENST00000378609 LRRC9Q6ZRR7 1453 aa28.92■■■□□ 2.22
GNB1-201ENST00000378609 CHMP7Q8WUX9 453 aaPredicted RBP28.9■■■□□ 2.22
GNB1-201ENST00000378609 MTUS2Q5JR59 1369 aa28.9■■■□□ 2.22
GNB1-201ENST00000378609 TIAM1Q13009 1591 aa28.89■■■□□ 2.22
GNB1-201ENST00000378609 ABCA5Q8WWZ7 1642 aa28.89■■■□□ 2.22
GNB1-201ENST00000378609 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
GNB1-201ENST00000378609 NEUROD1Q13562 356 aa28.87■■■□□ 2.21
GNB1-201ENST00000378609 RRBP1Q9P2E9 1410 aaKnown RBP28.86■■■□□ 2.21
GNB1-201ENST00000378609 CUL7Q14999 1698 aa28.85■■■□□ 2.21
GNB1-201ENST00000378609 DHX57Q6P158 1386 aaKnown RBP28.85■■■□□ 2.21
GNB1-201ENST00000378609 ZNF316A6NFI3 1004 aaPredicted RBP28.85■■■□□ 2.21
GNB1-201ENST00000378609 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
GNB1-201ENST00000378609 CHIC2Q9UKJ5 165 aa28.82■■■□□ 2.2
GNB1-201ENST00000378609 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
GNB1-201ENST00000378609 FMN1Q68DA7 1419 aa28.77■■■□□ 2.2
GNB1-201ENST00000378609 SIN3AQ96ST3 1273 aa28.77■■■□□ 2.2
GNB1-201ENST00000378609 CASKIN1Q8WXD9 1431 aa28.76■■■□□ 2.19
GNB1-201ENST00000378609 GRIN2BQ13224 1484 aa28.75■■■□□ 2.19
GNB1-201ENST00000378609 YTHDC1Q96MU7 727 aaKnown RBP28.73■■■□□ 2.19
GNB1-201ENST00000378609 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
GNB1-201ENST00000378609 CTTNBP2Q8WZ74 1663 aa28.72■■■□□ 2.19
GNB1-201ENST00000378609 IFT140Q96RY7 1462 aa28.67■■■□□ 2.18
GNB1-201ENST00000378609 RRP7BPQ9NSQ0 103 aa28.67■■■□□ 2.18
GNB1-201ENST00000378609 FYCO1Q9BQS8 1478 aa28.67■■■□□ 2.18
GNB1-201ENST00000378609 EFCAB5A4FU69 1503 aa28.66■■■□□ 2.18
GNB1-201ENST00000378609 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
GNB1-201ENST00000378609 SETD5Q9C0A6 1442 aa28.58■■■□□ 2.17
GNB1-201ENST00000378609 WDR62O43379 1518 aa28.58■■■□□ 2.17
GNB1-201ENST00000378609 HIRIP3Q9BW71 556 aaPredicted RBP28.58■■■□□ 2.17
GNB1-201ENST00000378609 MIER1Q8N108 512 aa28.57■■■□□ 2.16
GNB1-201ENST00000378609 CDK13Q14004 1512 aaKnown RBP28.56■■■□□ 2.16
GNB1-201ENST00000378609 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
GNB1-201ENST00000378609 JPH4Q96JJ6 628 aa28.54■■■□□ 2.16
GNB1-201ENST00000378609 IQGAP2Q13576 1575 aa28.54■■■□□ 2.16
GNB1-201ENST00000378609 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
GNB1-201ENST00000378609 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
GNB1-201ENST00000378609 FGD6Q6ZV73 1430 aa28.51■■■□□ 2.16
GNB1-201ENST00000378609 NCOA2Q15596 1464 aa28.51■■■□□ 2.15
GNB1-201ENST00000378609 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
GNB1-201ENST00000378609 ZNF644Q9H582 1327 aaPredicted RBP28.51■■■□□ 2.15
GNB1-201ENST00000378609 PTPRKQ15262 1439 aa28.49■■■□□ 2.15
GNB1-201ENST00000378609 SAMD9Q5K651 1589 aa28.48■■■□□ 2.15
GNB1-201ENST00000378609 TRIM52Q96A61 297 aa28.48■■■□□ 2.15
GNB1-201ENST00000378609 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
GNB1-201ENST00000378609 CFAP43Q8NDM7 1665 aa28.46■■■□□ 2.15
GNB1-201ENST00000378609 MAGI3Q5TCQ9 1506 aa28.46■■■□□ 2.15
GNB1-201ENST00000378609 LRRIQ1Q96JM4 1722 aa28.42■■■□□ 2.14
GNB1-201ENST00000378609 FOXD1Q16676 465 aa28.4■■■□□ 2.14
GNB1-201ENST00000378609 EPRSP07814 1512 aaKnown RBP28.39■■■□□ 2.13
GNB1-201ENST00000378609 KIAA0586Q9BVV6 1533 aa28.39■■■□□ 2.13
GNB1-201ENST00000378609 MYOM3Q5VTT5 1437 aa28.37■■■□□ 2.13
GNB1-201ENST00000378609 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
GNB1-201ENST00000378609 PLB1Q6P1J6 1458 aa28.36■■■□□ 2.13
GNB1-201ENST00000378609 CLSPNQ9HAW4 1339 aa28.35■■■□□ 2.13
GNB1-201ENST00000378609 DISP1Q96F81 1524 aa28.35■■■□□ 2.13
GNB1-201ENST00000378609 MAPKBP1O60336 1514 aa28.29■■■□□ 2.12
GNB1-201ENST00000378609 PRG4Q92954 1404 aaPredicted RBP28.29■■■□□ 2.12
GNB1-201ENST00000378609 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
GNB1-201ENST00000378609 SCAF1Q9H7N4 1312 aaKnown RBP28.29■■■□□ 2.12
GNB1-201ENST00000378609 CDK11AQ9UQ88 783 aaPredicted RBP28.27■■■□□ 2.12
GNB1-201ENST00000378609 CEP170Q5SW79 1584 aa28.26■■■□□ 2.11
GNB1-201ENST00000378609 CFDP1Q9UEE9 299 aaPredicted RBP28.24■■■□□ 2.11
GNB1-201ENST00000378609 MAGI1Q96QZ7 1491 aaPredicted RBP28.22■■■□□ 2.11
GNB1-201ENST00000378609 UGGT2Q9NYU1 1516 aa28.22■■■□□ 2.11
GNB1-201ENST00000378609 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
GNB1-201ENST00000378609 CCDC18Q5T9S5 1454 aa28.21■■■□□ 2.11
GNB1-201ENST00000378609 EHBP1L1Q8N3D4 1523 aa28.19■■■□□ 2.1
GNB1-201ENST00000378609 KIAA0556O60303 1618 aa28.19■■■□□ 2.1
GNB1-201ENST00000378609 HECW1Q76N89 1606 aa28.19■■■□□ 2.1
GNB1-201ENST00000378609 SUPT6HQ7KZ85 1726 aaKnown RBP28.19■■■□□ 2.1
GNB1-201ENST00000378609 NAIPQ13075 1403 aa28.16■■■□□ 2.1
GNB1-201ENST00000378609 PLEKHD1A6NEE1 506 aa28.16■■■□□ 2.1
GNB1-201ENST00000378609 DDX10Q13206 875 aaKnown RBP28.16■■■□□ 2.1
GNB1-201ENST00000378609 CARMIL2Q6F5E8 1435 aa28.14■■■□□ 2.1
GNB1-201ENST00000378609 ACIN1Q9UKV3 1341 aaKnown RBP28.14■■■□□ 2.1
GNB1-201ENST00000378609 KCNH8Q96L42 1107 aa28.14■■■□□ 2.1
GNB1-201ENST00000378609 PTPN23Q9H3S7 1636 aa28.13■■■□□ 2.09
GNB1-201ENST00000378609 TONSLQ96HA7 1378 aa28.1■■■□□ 2.09
GNB1-201ENST00000378609 HFM1A2PYH4 1435 aa28.09■■■□□ 2.09
GNB1-201ENST00000378609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.08■■■□□ 2.091e-12■■□□□ 14.2
GNB1-201ENST00000378609 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
GNB1-201ENST00000378609 PPP1R15AO75807 674 aaPredicted RBP28.07■■■□□ 2.08
GNB1-201ENST00000378609 MPHOSPH9Q99550 1183 aa28.04■■■□□ 2.08
GNB1-201ENST00000378609 NUP160Q12769 1436 aa28.04■■■□□ 2.08
GNB1-201ENST00000378609 GTF3C3Q9Y5Q9 886 aa28.04■■■□□ 2.08
GNB1-201ENST00000378609 HNRNPMP52272 730 aaKnown RBP eCLIP28.03■■■□□ 2.081e-6■■■■□ 22.1
GNB1-201ENST00000378609 PTPRGP23470 1445 aa28.03■■■□□ 2.08
GNB1-201ENST00000378609 RAPGEF6Q8TEU7 1601 aa28.02■■■□□ 2.08
GNB1-201ENST00000378609 SLC4A1APQ9BWU0 796 aaKnown RBP28.01■■■□□ 2.07
GNB1-201ENST00000378609 UACAQ9BZF9 1416 aa27.98■■■□□ 2.07
GNB1-201ENST00000378609 KDM6BO15054 1643 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms