RNA–Protein interactions for RNA: ENST00000378209.7

DFFB-205, Transcript of DNA fragmentation factor subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFB, Length 3,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-205ENST00000378209 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
DFFB-205ENST00000378209 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.47
DFFB-205ENST00000378209 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
DFFB-205ENST00000378209 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
DFFB-205ENST00000378209 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
DFFB-205ENST00000378209 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
DFFB-205ENST00000378209 IGF1RP08069 1367 aa17.98■□□□□ 0.47
DFFB-205ENST00000378209 NESP48681 1621 aa17.97■□□□□ 0.47
DFFB-205ENST00000378209 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
DFFB-205ENST00000378209 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
DFFB-205ENST00000378209 NBR1Q14596 966 aa17.96■□□□□ 0.46
DFFB-205ENST00000378209 CDK11AQ9UQ88 783 aaPredicted RBP17.95■□□□□ 0.46
DFFB-205ENST00000378209 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
DFFB-205ENST00000378209 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
DFFB-205ENST00000378209 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
DFFB-205ENST00000378209 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
DFFB-205ENST00000378209 ARHGAP35Q9NRY4 1499 aa17.91■□□□□ 0.46
DFFB-205ENST00000378209 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
DFFB-205ENST00000378209 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
DFFB-205ENST00000378209 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
DFFB-205ENST00000378209 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
DFFB-205ENST00000378209 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
DFFB-205ENST00000378209 RTN4Q9NQC3 1192 aaKnown RBP17.87■□□□□ 0.45
DFFB-205ENST00000378209 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
DFFB-205ENST00000378209 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
DFFB-205ENST00000378209 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
DFFB-205ENST00000378209 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
DFFB-205ENST00000378209 ERICH6BQ5W0A0 696 aa17.76■□□□□ 0.43
DFFB-205ENST00000378209 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
DFFB-205ENST00000378209 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
DFFB-205ENST00000378209 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
DFFB-205ENST00000378209 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
DFFB-205ENST00000378209 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
DFFB-205ENST00000378209 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
DFFB-205ENST00000378209 HIRIP3Q9BW71 556 aaPredicted RBP17.7■□□□□ 0.42
DFFB-205ENST00000378209 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
DFFB-205ENST00000378209 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
DFFB-205ENST00000378209 UBE2Q2Q8WVN8 375 aa17.68■□□□□ 0.42
DFFB-205ENST00000378209 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
DFFB-205ENST00000378209 RRBP1Q9P2E9 1410 aaKnown RBP17.68■□□□□ 0.42
DFFB-205ENST00000378209 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
DFFB-205ENST00000378209 ANP32CO43423 234 aa17.66■□□□□ 0.42
DFFB-205ENST00000378209 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
DFFB-205ENST00000378209 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
DFFB-205ENST00000378209 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
DFFB-205ENST00000378209 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
DFFB-205ENST00000378209 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
DFFB-205ENST00000378209 CCER2I3L3R5 266 aa17.59■□□□□ 0.41
DFFB-205ENST00000378209 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
DFFB-205ENST00000378209 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
DFFB-205ENST00000378209 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.41
DFFB-205ENST00000378209 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
DFFB-205ENST00000378209 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
DFFB-205ENST00000378209 EIF5BO60841 1220 aaKnown RBP17.56■□□□□ 0.4
DFFB-205ENST00000378209 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
DFFB-205ENST00000378209 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
DFFB-205ENST00000378209 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
DFFB-205ENST00000378209 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
DFFB-205ENST00000378209 ARID3CA6NKF2 412 aa17.5■□□□□ 0.39
DFFB-205ENST00000378209 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
DFFB-205ENST00000378209 CUL7Q14999 1698 aa17.49■□□□□ 0.39
DFFB-205ENST00000378209 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
DFFB-205ENST00000378209 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
DFFB-205ENST00000378209 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
DFFB-205ENST00000378209 ZBTB47Q9UFB7 747 aaPredicted RBP17.47■□□□□ 0.39
DFFB-205ENST00000378209 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.398e-7■■■■■ 28.7
DFFB-205ENST00000378209 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
DFFB-205ENST00000378209 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
DFFB-205ENST00000378209 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
DFFB-205ENST00000378209 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
DFFB-205ENST00000378209 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
DFFB-205ENST00000378209 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
DFFB-205ENST00000378209 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
DFFB-205ENST00000378209 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
DFFB-205ENST00000378209 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
DFFB-205ENST00000378209 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
DFFB-205ENST00000378209 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
DFFB-205ENST00000378209 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.38
DFFB-205ENST00000378209 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
DFFB-205ENST00000378209 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
DFFB-205ENST00000378209 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
DFFB-205ENST00000378209 NEFMP07197 916 aa17.36■□□□□ 0.37
DFFB-205ENST00000378209 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
DFFB-205ENST00000378209 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.37
DFFB-205ENST00000378209 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.37
DFFB-205ENST00000378209 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
DFFB-205ENST00000378209 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
DFFB-205ENST00000378209 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
DFFB-205ENST00000378209 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
DFFB-205ENST00000378209 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
DFFB-205ENST00000378209 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
DFFB-205ENST00000378209 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
DFFB-205ENST00000378209 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
DFFB-205ENST00000378209 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
DFFB-205ENST00000378209 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
DFFB-205ENST00000378209 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.35
DFFB-205ENST00000378209 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
DFFB-205ENST00000378209 FBLN2P98095 1184 aa17.25■□□□□ 0.35
DFFB-205ENST00000378209 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
DFFB-205ENST00000378209 MAGI3Q5TCQ9 1506 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms