RNA–Protein interactions for RNA: ENST00000378209.7

DFFB-205, Transcript of DNA fragmentation factor subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFB, Length 3,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-205ENST00000378209 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
DFFB-205ENST00000378209 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
DFFB-205ENST00000378209 HRCP23327 699 aa21.62■■□□□ 1.05
DFFB-205ENST00000378209 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
DFFB-205ENST00000378209 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
DFFB-205ENST00000378209 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
DFFB-205ENST00000378209 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
DFFB-205ENST00000378209 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
DFFB-205ENST00000378209 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.97
DFFB-205ENST00000378209 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
DFFB-205ENST00000378209 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
DFFB-205ENST00000378209 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
DFFB-205ENST00000378209 MYT1Q01538 1121 aa20.61■□□□□ 0.89
DFFB-205ENST00000378209 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
DFFB-205ENST00000378209 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
DFFB-205ENST00000378209 ABCC9O60706 1549 aa20.23■□□□□ 0.83
DFFB-205ENST00000378209 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
DFFB-205ENST00000378209 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
DFFB-205ENST00000378209 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
DFFB-205ENST00000378209 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
DFFB-205ENST00000378209 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
DFFB-205ENST00000378209 NEUROD1Q13562 356 aa20.05■□□□□ 0.8
DFFB-205ENST00000378209 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
DFFB-205ENST00000378209 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.78
DFFB-205ENST00000378209 NACADO15069 1562 aa19.81■□□□□ 0.76
DFFB-205ENST00000378209 CENPBP07199 599 aaPredicted RBP19.78■□□□□ 0.76
DFFB-205ENST00000378209 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
DFFB-205ENST00000378209 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
DFFB-205ENST00000378209 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
DFFB-205ENST00000378209 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
DFFB-205ENST00000378209 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
DFFB-205ENST00000378209 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
DFFB-205ENST00000378209 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
DFFB-205ENST00000378209 WIZO95785 1651 aa19.5■□□□□ 0.71
DFFB-205ENST00000378209 YTHDC1Q96MU7 727 aaKnown RBP19.48■□□□□ 0.71
DFFB-205ENST00000378209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
DFFB-205ENST00000378209 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
DFFB-205ENST00000378209 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
DFFB-205ENST00000378209 CCER1Q8TC90 406 aaPredicted RBP19.41■□□□□ 0.7
DFFB-205ENST00000378209 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
DFFB-205ENST00000378209 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
DFFB-205ENST00000378209 UNC13AQ9UPW8 1703 aa19.27■□□□□ 0.67
DFFB-205ENST00000378209 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
DFFB-205ENST00000378209 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.65
DFFB-205ENST00000378209 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
DFFB-205ENST00000378209 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
DFFB-205ENST00000378209 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
DFFB-205ENST00000378209 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
DFFB-205ENST00000378209 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
DFFB-205ENST00000378209 MIER1Q8N108 512 aa19.03■□□□□ 0.64
DFFB-205ENST00000378209 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.63
DFFB-205ENST00000378209 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
DFFB-205ENST00000378209 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
DFFB-205ENST00000378209 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
DFFB-205ENST00000378209 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
DFFB-205ENST00000378209 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.61
DFFB-205ENST00000378209 SOGA1O94964 1423 aa18.87■□□□□ 0.61
DFFB-205ENST00000378209 RUSC2Q8N2Y8 1516 aa18.8■□□□□ 0.6
DFFB-205ENST00000378209 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
DFFB-205ENST00000378209 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
DFFB-205ENST00000378209 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
DFFB-205ENST00000378209 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
DFFB-205ENST00000378209 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
DFFB-205ENST00000378209 BCANQ96GW7 911 aa18.64■□□□□ 0.57
DFFB-205ENST00000378209 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
DFFB-205ENST00000378209 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
DFFB-205ENST00000378209 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
DFFB-205ENST00000378209 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
DFFB-205ENST00000378209 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
DFFB-205ENST00000378209 EEA1Q15075 1411 aa18.52■□□□□ 0.56
DFFB-205ENST00000378209 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
DFFB-205ENST00000378209 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
DFFB-205ENST00000378209 RBM19Q9Y4C8 960 aaKnown RBP18.43■□□□□ 0.54
DFFB-205ENST00000378209 ERICH6Q7L0X2 663 aa18.39■□□□□ 0.53
DFFB-205ENST00000378209 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
DFFB-205ENST00000378209 FKBP8Q14318 412 aa18.38■□□□□ 0.53
DFFB-205ENST00000378209 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
DFFB-205ENST00000378209 RAPGEF2Q9Y4G8 1499 aa18.38■□□□□ 0.53
DFFB-205ENST00000378209 CLIP1P30622 1438 aa18.34■□□□□ 0.53
DFFB-205ENST00000378209 MSH5O43196 834 aa18.32■□□□□ 0.52
DFFB-205ENST00000378209 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
DFFB-205ENST00000378209 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
DFFB-205ENST00000378209 ITGAEP38570 1179 aa18.31■□□□□ 0.52
DFFB-205ENST00000378209 KIF21BO75037 1637 aa18.28■□□□□ 0.52
DFFB-205ENST00000378209 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
DFFB-205ENST00000378209 CUX1P39880 1505 aa18.25■□□□□ 0.51
DFFB-205ENST00000378209 ANO8Q9HCE9 1232 aaPredicted RBP18.24■□□□□ 0.51
DFFB-205ENST00000378209 APLP2Q06481 763 aa18.23■□□□□ 0.51
DFFB-205ENST00000378209 CFTRP13569 1480 aa18.21■□□□□ 0.51
DFFB-205ENST00000378209 NEFLP07196 543 aa18.2■□□□□ 0.5
DFFB-205ENST00000378209 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
DFFB-205ENST00000378209 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
DFFB-205ENST00000378209 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
DFFB-205ENST00000378209 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
DFFB-205ENST00000378209 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
DFFB-205ENST00000378209 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
DFFB-205ENST00000378209 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
DFFB-205ENST00000378209 CUX2O14529 1486 aa18.05■□□□□ 0.48
DFFB-205ENST00000378209 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
DFFB-205ENST00000378209 SALL2Q9Y467 1007 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms