RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 PHLDB1Q86UU1 1377 aa32.74■■■□□ 2.83
FOXA2-201ENST00000377115 MAP3K1Q13233 1512 aa32.73■■■□□ 2.83
FOXA2-201ENST00000377115 LRRC9Q6ZRR7 1453 aa32.71■■■□□ 2.83
FOXA2-201ENST00000377115 HIRIP3Q9BW71 556 aaPredicted RBP32.69■■■□□ 2.82
FOXA2-201ENST00000377115 FAM50AQ14320 339 aaKnown RBP32.68■■■□□ 2.82
FOXA2-201ENST00000377115 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
FOXA2-201ENST00000377115 CFTRP13569 1480 aa32.64■■■□□ 2.82
FOXA2-201ENST00000377115 NCAPD3P42695 1498 aa32.64■■■□□ 2.82
FOXA2-201ENST00000377115 IGF1RP08069 1367 aa32.64■■■□□ 2.81
FOXA2-201ENST00000377115 TRIM52Q96A61 297 aa32.63■■■□□ 2.81
FOXA2-201ENST00000377115 NEFLP07196 543 aa32.62■■■□□ 2.81
FOXA2-201ENST00000377115 RBM19Q9Y4C8 960 aaKnown RBP32.59■■■□□ 2.81
FOXA2-201ENST00000377115 CCER2I3L3R5 266 aa32.56■■■□□ 2.8
FOXA2-201ENST00000377115 ANP32CO43423 234 aa32.53■■■□□ 2.8
FOXA2-201ENST00000377115 TIMELESSQ9UNS1 1208 aa32.53■■■□□ 2.8
FOXA2-201ENST00000377115 CFAP43Q8NDM7 1665 aa32.51■■■□□ 2.79
FOXA2-201ENST00000377115 CARMIL1Q5VZK9 1371 aa32.51■■■□□ 2.79
FOXA2-201ENST00000377115 PCF11O94913 1555 aaKnown RBP32.49■■■□□ 2.79
FOXA2-201ENST00000377115 BCL11AQ9H165 835 aa32.47■■■□□ 2.79
FOXA2-201ENST00000377115 P3H3Q8IVL6 736 aa32.46■■■□□ 2.79
FOXA2-201ENST00000377115 FHAD1B1AJZ9 1412 aa32.45■■■□□ 2.79
FOXA2-201ENST00000377115 ATP1B4Q9UN42 357 aaPredicted RBP32.44■■■□□ 2.78
FOXA2-201ENST00000377115 PRDM2Q13029 1718 aa32.36■■■□□ 2.77
FOXA2-201ENST00000377115 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
FOXA2-201ENST00000377115 TONSLQ96HA7 1378 aa32.32■■■□□ 2.76
FOXA2-201ENST00000377115 FHOD3Q2V2M9 1422 aa32.31■■■□□ 2.76
FOXA2-201ENST00000377115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.26■■■□□ 2.75
FOXA2-201ENST00000377115 MSH5O43196 834 aa32.25■■■□□ 2.75
FOXA2-201ENST00000377115 FYCO1Q9BQS8 1478 aa32.24■■■□□ 2.75
FOXA2-201ENST00000377115 CCDC18Q5T9S5 1454 aa32.22■■■□□ 2.75
FOXA2-201ENST00000377115 FGD6Q6ZV73 1430 aa32.18■■■□□ 2.74
FOXA2-201ENST00000377115 CASKIN1Q8WXD9 1431 aa32.18■■■□□ 2.74
FOXA2-201ENST00000377115 HNRNPUQ00839 825 aaKnown RBP eCLIP32.17■■■□□ 2.74
FOXA2-201ENST00000377115 IRX6P78412 446 aaPredicted RBP32.16■■■□□ 2.74
FOXA2-201ENST00000377115 PTPRKQ15262 1439 aa32.14■■■□□ 2.73
FOXA2-201ENST00000377115 UACAQ9BZF9 1416 aa32.14■■■□□ 2.73
FOXA2-201ENST00000377115 CADPSQ9ULU8 1353 aa32.13■■■□□ 2.73
FOXA2-201ENST00000377115 HFM1A2PYH4 1435 aa32.1■■■□□ 2.73
FOXA2-201ENST00000377115 EFCAB5A4FU69 1503 aa32.1■■■□□ 2.73
FOXA2-201ENST00000377115 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.736e-11■■■■■ 35.6
FOXA2-201ENST00000377115 PTPN23Q9H3S7 1636 aa32.09■■■□□ 2.73
FOXA2-201ENST00000377115 KDM5BQ9UGL1 1544 aa32.06■■■□□ 2.72
FOXA2-201ENST00000377115 FANCIQ9NVI1 1328 aa32.04■■■□□ 2.72
FOXA2-201ENST00000377115 CDK11AQ9UQ88 783 aaPredicted RBP32.03■■■□□ 2.72
FOXA2-201ENST00000377115 NAIPQ13075 1403 aa32.01■■■□□ 2.71
FOXA2-201ENST00000377115 MTUS2Q5JR59 1369 aa32■■■□□ 2.71
FOXA2-201ENST00000377115 SNAPC4Q5SXM2 1469 aa31.98■■■□□ 2.71
FOXA2-201ENST00000377115 RAD54L2Q9Y4B4 1467 aa31.98■■■□□ 2.71
FOXA2-201ENST00000377115 WASHC2AQ641Q2 1341 aa31.97■■■□□ 2.71
FOXA2-201ENST00000377115 FMN1Q68DA7 1419 aa31.95■■■□□ 2.71
FOXA2-201ENST00000377115 CTTNBP2Q8WZ74 1663 aa31.94■■■□□ 2.7
FOXA2-201ENST00000377115 HSPA5P11021 654 aaKnown RBP31.93■■■□□ 2.7
FOXA2-201ENST00000377115 ABCA10Q8WWZ4 1543 aa31.89■■■□□ 2.7
FOXA2-201ENST00000377115 NCOA2Q15596 1464 aa31.88■■■□□ 2.69
FOXA2-201ENST00000377115 LRRIQ1Q96JM4 1722 aa31.88■■■□□ 2.69
FOXA2-201ENST00000377115 CCDC184Q52MB2 194 aa31.88■■■□□ 2.69
FOXA2-201ENST00000377115 FANCD2Q9BXW9 1451 aa31.87■■■□□ 2.69
FOXA2-201ENST00000377115 MYOM3Q5VTT5 1437 aa31.87■■■□□ 2.69
FOXA2-201ENST00000377115 ERICH6Q7L0X2 663 aa31.87■■■□□ 2.69
FOXA2-201ENST00000377115 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
FOXA2-201ENST00000377115 CUL7Q14999 1698 aa31.84■■■□□ 2.69
FOXA2-201ENST00000377115 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.68
FOXA2-201ENST00000377115 PPP4R2Q9NY27 417 aa31.81■■■□□ 2.68
FOXA2-201ENST00000377115 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
FOXA2-201ENST00000377115 ERICH6BQ5W0A0 696 aa31.8■■■□□ 2.68
FOXA2-201ENST00000377115 CNTLNQ9NXG0 1405 aa31.79■■■□□ 2.68
FOXA2-201ENST00000377115 RRP7BPQ9NSQ0 103 aa31.78■■■□□ 2.68
FOXA2-201ENST00000377115 DENND4BO75064 1496 aaPredicted RBP31.78■■■□□ 2.68
FOXA2-201ENST00000377115 EIF4G2P78344 907 aaKnown RBP eCLIP31.77■■■□□ 2.68
FOXA2-201ENST00000377115 SUPT6HQ7KZ85 1726 aaKnown RBP31.76■■■□□ 2.67
FOXA2-201ENST00000377115 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
FOXA2-201ENST00000377115 GRIN2BQ13224 1484 aa31.74■■■□□ 2.67
FOXA2-201ENST00000377115 CHIC2Q9UKJ5 165 aa31.74■■■□□ 2.67
FOXA2-201ENST00000377115 FAM9BQ8IZU0 186 aa31.72■■■□□ 2.67
FOXA2-201ENST00000377115 SAMD9Q5K651 1589 aa31.72■■■□□ 2.67
FOXA2-201ENST00000377115 C11orf95C9JLR9 678 aaPredicted RBP31.71■■■□□ 2.67
FOXA2-201ENST00000377115 B4GALNT3Q6L9W6 998 aa31.71■■■□□ 2.67
FOXA2-201ENST00000377115 EHBP1L1Q8N3D4 1523 aa31.7■■■□□ 2.67
FOXA2-201ENST00000377115 HECW1Q76N89 1606 aa31.7■■■□□ 2.67
FOXA2-201ENST00000377115 PRKRIP1Q9H875 184 aaPredicted RBP31.69■■■□□ 2.66
FOXA2-201ENST00000377115 UGGT2Q9NYU1 1516 aa31.68■■■□□ 2.66
FOXA2-201ENST00000377115 KDM6BO15054 1643 aa31.67■■■□□ 2.66
FOXA2-201ENST00000377115 GCC2Q8IWJ2 1684 aa31.66■■■□□ 2.66
FOXA2-201ENST00000377115 MRS2Q9HD23 443 aa31.65■■■□□ 2.66
FOXA2-201ENST00000377115 MAGI3Q5TCQ9 1506 aa31.64■■■□□ 2.66
FOXA2-201ENST00000377115 CCDC7Q96M83 1385 aa31.64■■■□□ 2.66
FOXA2-201ENST00000377115 NCOA1Q15788 1441 aa31.64■■■□□ 2.65
FOXA2-201ENST00000377115 L3MBTL2Q969R5 705 aa31.63■■■□□ 2.65
FOXA2-201ENST00000377115 THOC2Q8NI27 1593 aaKnown RBP31.63■■■□□ 2.65
FOXA2-201ENST00000377115 ZBED9Q6R2W3 1325 aa31.63■■■□□ 2.65
FOXA2-201ENST00000377115 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
FOXA2-201ENST00000377115 FOXD1Q16676 465 aa31.59■■■□□ 2.65
FOXA2-201ENST00000377115 MPHOSPH9Q99550 1183 aa31.58■■■□□ 2.65
FOXA2-201ENST00000377115 TCOF1Q13428 1488 aaKnown RBP31.57■■■□□ 2.64
FOXA2-201ENST00000377115 NESP48681 1621 aa31.52■■■□□ 2.64
FOXA2-201ENST00000377115 AKNAQ7Z591 1439 aa31.51■■■□□ 2.63
FOXA2-201ENST00000377115 TDRD9Q8NDG6 1382 aaKnown RBP31.5■■■□□ 2.63
FOXA2-201ENST00000377115 NBPF8Q3BBV2 869 aa31.49■■■□□ 2.63
FOXA2-201ENST00000377115 KIF7Q2M1P5 1343 aa31.46■■■□□ 2.63
FOXA2-201ENST00000377115 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms