RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 KIAA0586Q9BVV6 1533 aa45.31■■■■■ 4.84
COMMD3-201ENST00000376836 EEA1Q15075 1411 aa45.3■■■■■ 4.84
COMMD3-201ENST00000376836 ARAP1Q96P48 1450 aa45.28■■■■■ 4.84
COMMD3-201ENST00000376836 CSRNP3Q8WYN3 585 aa45.27■■■■■ 4.84
COMMD3-201ENST00000376836 SHROOM2Q13796 1616 aa45.26■■■■■ 4.84
COMMD3-201ENST00000376836 PRG4Q92954 1404 aaPredicted RBP45.19■■■■■ 4.83
COMMD3-201ENST00000376836 PRXQ9BXM0 1461 aa45.17■■■■■ 4.82
COMMD3-201ENST00000376836 FAM9AQ8IZU1 332 aaPredicted RBP45.16■■■■■ 4.82
COMMD3-201ENST00000376836 ERCC6L2Q5T890 1561 aa45.11■■■■■ 4.81
COMMD3-201ENST00000376836 IQGAP2Q13576 1575 aa45.03■■■■■ 4.8
COMMD3-201ENST00000376836 CARMIL2Q6F5E8 1435 aa44.92■■■■■ 4.78
COMMD3-201ENST00000376836 CTTNBP2Q8WZ74 1663 aa44.85■■■■■ 4.77
COMMD3-201ENST00000376836 UGGT2Q9NYU1 1516 aa44.78■■■■■ 4.76
COMMD3-201ENST00000376836 KIF21BO75037 1637 aa44.73■■■■■ 4.75
COMMD3-201ENST00000376836 TNIKQ9UKE5 1360 aa44.72■■■■■ 4.75
COMMD3-201ENST00000376836 PTPRGP23470 1445 aa44.69■■■■■ 4.75
COMMD3-201ENST00000376836 TTBK1Q5TCY1 1321 aaPredicted RBP44.69■■■■■ 4.74
COMMD3-201ENST00000376836 DISP1Q96F81 1524 aa44.67■■■■■ 4.74
COMMD3-201ENST00000376836 GOLGA3Q08378 1498 aa44.64■■■■■ 4.74
COMMD3-201ENST00000376836 EHMT2Q96KQ7 1210 aa44.57■■■■■ 4.73
COMMD3-201ENST00000376836 KIAA0556O60303 1618 aa44.57■■■■■ 4.73
COMMD3-201ENST00000376836 NPM1P06748 294 aaKnown RBP eCLIP44.55■■■■■ 4.72
COMMD3-201ENST00000376836 UBTFP17480 764 aaKnown RBP44.55■■■■■ 4.72
COMMD3-201ENST00000376836 TRHP20396 242 aaPredicted RBP44.5■■■■■ 4.72
COMMD3-201ENST00000376836 RANGAP1P46060 587 aaPredicted RBP44.44■■■■■ 4.7
COMMD3-201ENST00000376836 ADCY10Q96PN6 1610 aa44.39■■■■■ 4.7
COMMD3-201ENST00000376836 P3H3Q8IVL6 736 aa44.38■■■■■ 4.69
COMMD3-201ENST00000376836 UACAQ9BZF9 1416 aa44.37■■■■■ 4.69
COMMD3-201ENST00000376836 UHRF1BP1LA0JNW5 1464 aa44.28■■■■■ 4.68
COMMD3-201ENST00000376836 SAMD9Q5K651 1589 aa44.27■■■■■ 4.68
COMMD3-201ENST00000376836 ABCC2Q92887 1545 aa44.23■■■■■ 4.67
COMMD3-201ENST00000376836 EFCAB5A4FU69 1503 aa44.18■■■■■ 4.66
COMMD3-201ENST00000376836 PLB1Q6P1J6 1458 aa44.15■■■■■ 4.66
COMMD3-201ENST00000376836 MAPKBP1O60336 1514 aa44.14■■■■■ 4.66
COMMD3-201ENST00000376836 FHOD3Q2V2M9 1422 aa44.08■■■■■ 4.65
COMMD3-201ENST00000376836 ABCA8O94911 1581 aa44.07■■■■■ 4.65
COMMD3-201ENST00000376836 KDM5BQ9UGL1 1544 aa44.05■■■■■ 4.64
COMMD3-201ENST00000376836 FAM69CQ0P6D2 419 aa43.98■■■■■ 4.63
COMMD3-201ENST00000376836 ABCC10Q5T3U5 1492 aa43.96■■■■■ 4.63
COMMD3-201ENST00000376836 ASXL2Q76L83 1435 aa43.95■■■■■ 4.63
COMMD3-201ENST00000376836 ZCCHC11Q5TAX3 1644 aaKnown RBP43.94■■■■■ 4.62
COMMD3-201ENST00000376836 ARHGAP35Q9NRY4 1499 aa43.92■■■■■ 4.62
COMMD3-201ENST00000376836 RAPGEF6Q8TEU7 1601 aa43.89■■■■■ 4.62
COMMD3-201ENST00000376836 ARID3CA6NKF2 412 aa43.84■■■■■ 4.61
COMMD3-201ENST00000376836 DIP2BQ9P265 1576 aa43.83■■■■■ 4.61
COMMD3-201ENST00000376836 FMN1Q68DA7 1419 aa43.82■■■■■ 4.61
COMMD3-201ENST00000376836 KIF13AQ9H1H9 1805 aa43.81■■■■■ 4.6
COMMD3-201ENST00000376836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.79■■■■■ 4.6
COMMD3-201ENST00000376836 HNRNPUL2Q1KMD3 747 aaKnown RBP43.79■■■■■ 4.6
COMMD3-201ENST00000376836 ATP10BO94823 1461 aa43.76■■■■■ 4.6
COMMD3-201ENST00000376836 CLIP1P30622 1438 aa43.75■■■■■ 4.59
COMMD3-201ENST00000376836 WDR7Q9Y4E6 1490 aa43.74■■■■■ 4.59
COMMD3-201ENST00000376836 NUP153P49790 1475 aaKnown RBP43.71■■■■■ 4.59
COMMD3-201ENST00000376836 ATP1B4Q9UN42 357 aaPredicted RBP43.71■■■■■ 4.59
COMMD3-201ENST00000376836 LOC105371045A0A1W2PR82 267 aa43.7■■■■■ 4.59
COMMD3-201ENST00000376836 EPRSP07814 1512 aaKnown RBP43.67■■■■■ 4.58
COMMD3-201ENST00000376836 KCNH8Q96L42 1107 aa43.65■■■■■ 4.58
COMMD3-201ENST00000376836 GLI2P10070 1586 aa43.65■■■■■ 4.58
COMMD3-201ENST00000376836 PLEKHD1A6NEE1 506 aa43.55■■■■■ 4.56
COMMD3-201ENST00000376836 HECW1Q76N89 1606 aa43.55■■■■■ 4.56
COMMD3-201ENST00000376836 CEP162Q5TB80 1403 aa43.55■■■■■ 4.56
COMMD3-201ENST00000376836 TSPOAP1O95153 1857 aa43.47■■■■■ 4.55
COMMD3-201ENST00000376836 CDK11AQ9UQ88 783 aaPredicted RBP43.44■■■■■ 4.54
COMMD3-201ENST00000376836 CASKIN1Q8WXD9 1431 aa43.44■■■■■ 4.54
COMMD3-201ENST00000376836 CDK13Q14004 1512 aaKnown RBP43.41■■■■■ 4.54
COMMD3-201ENST00000376836 MAP3K4Q9Y6R4 1608 aa43.41■■■■■ 4.54
COMMD3-201ENST00000376836 CD109Q6YHK3 1445 aa43.38■■■■■ 4.53
COMMD3-201ENST00000376836 PCF11O94913 1555 aaKnown RBP43.35■■■■■ 4.53
COMMD3-201ENST00000376836 TEX14Q8IWB6 1497 aa43.34■■■■■ 4.53
COMMD3-201ENST00000376836 CFAP43Q8NDM7 1665 aa43.33■■■■■ 4.53
COMMD3-201ENST00000376836 FYCO1Q9BQS8 1478 aa43.33■■■■■ 4.53
COMMD3-201ENST00000376836 CCDC18Q5T9S5 1454 aa43.29■■■■■ 4.52
COMMD3-201ENST00000376836 PPRC1Q5VV67 1664 aaKnown RBP43.25■■■■■ 4.51
COMMD3-201ENST00000376836 MAGI3Q5TCQ9 1506 aa43.23■■■■■ 4.51
COMMD3-201ENST00000376836 ABCA9Q8IUA7 1624 aa43.23■■■■■ 4.51
COMMD3-201ENST00000376836 KDM6BO15054 1643 aa43.18■■■■■ 4.5
COMMD3-201ENST00000376836 LRRIQ1Q96JM4 1722 aa43.15■■■■■ 4.5
COMMD3-201ENST00000376836 TROQ12816 1431 aaPredicted RBP43.13■■■■■ 4.49
COMMD3-201ENST00000376836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.07■■■■■ 4.49
COMMD3-201ENST00000376836 AEBP2Q6ZN18 517 aaPredicted RBP43.02■■■■■ 4.48
COMMD3-201ENST00000376836 VPS8Q8N3P4 1428 aa43.02■■■■■ 4.48
COMMD3-201ENST00000376836 KIF14Q15058 1648 aa43.02■■■■■ 4.48
COMMD3-201ENST00000376836 PHLDB1Q86UU1 1377 aa43.01■■■■■ 4.48
COMMD3-201ENST00000376836 TTC37Q6PGP7 1564 aa42.98■■■■■ 4.47
COMMD3-201ENST00000376836 NEO1Q92859 1461 aa42.95■■■■■ 4.47
COMMD3-201ENST00000376836 MTUS2Q5JR59 1369 aa42.91■■■■■ 4.46
COMMD3-201ENST00000376836 COL17A1Q9UMD9 1497 aaPredicted RBP42.9■■■■■ 4.46
COMMD3-201ENST00000376836 PLCH2O75038 1416 aa42.89■■■■■ 4.46
COMMD3-201ENST00000376836 FANCAO15360 1455 aa42.87■■■■■ 4.45
COMMD3-201ENST00000376836 ARAP3Q8WWN8 1544 aa42.86■■■■■ 4.45
COMMD3-201ENST00000376836 CFAP74Q9C0B2 1584 aa42.84■■■■■ 4.45
COMMD3-201ENST00000376836 EFCAB2Q5VUJ9 269 aa42.82■■■■■ 4.45
COMMD3-201ENST00000376836 MYO5CQ9NQX4 1742 aa42.8■■■■■ 4.44
COMMD3-201ENST00000376836 AKNAQ7Z591 1439 aa42.8■■■■■ 4.44
COMMD3-201ENST00000376836 APLP2Q06481 763 aa42.75■■■■■ 4.43
COMMD3-201ENST00000376836 EHBP1L1Q8N3D4 1523 aa42.73■■■■■ 4.43
COMMD3-201ENST00000376836 ARHGAP5Q13017 1502 aa42.72■■■■■ 4.43
COMMD3-201ENST00000376836 TIAM1Q13009 1591 aa42.7■■■■■ 4.43
COMMD3-201ENST00000376836 RAPGEF3O95398 923 aa42.7■■■■■ 4.43
COMMD3-201ENST00000376836 DENND4BO75064 1496 aaPredicted RBP42.67■■■■■ 4.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms