RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 DDX3XO00571 662 aaKnown RBP eCLIP28.09■■■□□ 2.093e-20■■□□□ 14.4
COMMD3-201ENST00000376836 PABPC4Q13310 644 aaKnown RBP eCLIP32.33■■■□□ 2.772e-13■□□□□ 8.7
COMMD3-201ENST00000376836 KHSRPQ92945 711 aaKnown RBP eCLIP28.86■■■□□ 2.211e-11■■□□□ 14
COMMD3-201ENST00000376836 EFTUD2Q15029 972 aaKnown RBP eCLIP26.1■■□□□ 1.771e-10■■■■■ 27.9
COMMD3-201ENST00000376836 U2AF2P26368 475 aaKnown RBP eCLIP30.58■■■□□ 2.492e-8■■■□□ 15.6
COMMD3-201ENST00000376836 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.64■■□□□ 1.211e-7■■■■□ 21.5
COMMD3-201ENST00000376836 AQRO60306 1485 aaKnown RBP eCLIP46.86■■■■■ 5.096e-7■■■■□ 24.7
COMMD3-201ENST00000376836 SUB1P53999 127 aaKnown RBP eCLIP20.81■□□□□ 0.921e-6■■■■■ 30.7
COMMD3-201ENST00000376836 YBX3P16989 372 aaKnown RBP eCLIP34.81■■■■□ 3.163e-6■□□□□ 10
COMMD3-201ENST00000376836 SF3B1O75533 1304 aaKnown RBP eCLIP29.52■■■□□ 2.323e-6■■■■■ 44.6
COMMD3-201ENST00000376836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.26■■■□□ 2.114e-6■■■■□ 22
COMMD3-201ENST00000376836 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.16■■□□□ 1.626e-6■■■□□ 15.1
Retrieved 12 of 12 RNA–protein pairs in 3.2 ms