RNA–Protein interactions for RNA: ENST00000376834.7

CARNMT1-202, Transcript of carnosine N-methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARNMT1, Length 4,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARNMT1-202ENST00000376834 IGF1RP08069 1367 aa21.87■■□□□ 1.09
CARNMT1-202ENST00000376834 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
CARNMT1-202ENST00000376834 NESP48681 1621 aa21.87■■□□□ 1.09
CARNMT1-202ENST00000376834 CFDP1Q9UEE9 299 aaPredicted RBP21.87■■□□□ 1.09
CARNMT1-202ENST00000376834 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
CARNMT1-202ENST00000376834 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
CARNMT1-202ENST00000376834 DDX10Q13206 875 aaKnown RBP21.84■■□□□ 1.09
CARNMT1-202ENST00000376834 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
CARNMT1-202ENST00000376834 ANP32CO43423 234 aa21.83■■□□□ 1.08
CARNMT1-202ENST00000376834 CFTRP13569 1480 aa21.82■■□□□ 1.08
CARNMT1-202ENST00000376834 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
CARNMT1-202ENST00000376834 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
CARNMT1-202ENST00000376834 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
CARNMT1-202ENST00000376834 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
CARNMT1-202ENST00000376834 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
CARNMT1-202ENST00000376834 KDM2AQ9Y2K7 1162 aa21.74■■□□□ 1.07
CARNMT1-202ENST00000376834 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
CARNMT1-202ENST00000376834 CHGAP10645 457 aaKnown RBP21.7■■□□□ 1.06
CARNMT1-202ENST00000376834 MIER1Q8N108 512 aa21.69■■□□□ 1.06
CARNMT1-202ENST00000376834 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
CARNMT1-202ENST00000376834 JPH4Q96JJ6 628 aa21.67■■□□□ 1.06
CARNMT1-202ENST00000376834 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.06
CARNMT1-202ENST00000376834 FMN1Q68DA7 1419 aa21.62■■□□□ 1.05
CARNMT1-202ENST00000376834 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
CARNMT1-202ENST00000376834 CUX1P39880 1505 aa21.61■■□□□ 1.05
CARNMT1-202ENST00000376834 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
CARNMT1-202ENST00000376834 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
CARNMT1-202ENST00000376834 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
CARNMT1-202ENST00000376834 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
CARNMT1-202ENST00000376834 BCANQ96GW7 911 aa21.56■■□□□ 1.04
CARNMT1-202ENST00000376834 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
CARNMT1-202ENST00000376834 FOXD1Q16676 465 aa21.54■■□□□ 1.04
CARNMT1-202ENST00000376834 CARMIL2Q6F5E8 1435 aa21.52■■□□□ 1.04
CARNMT1-202ENST00000376834 RAB3GAP2Q9H2M9 1393 aa21.51■■□□□ 1.03
CARNMT1-202ENST00000376834 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
CARNMT1-202ENST00000376834 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
CARNMT1-202ENST00000376834 SETD5Q9C0A6 1442 aa21.49■■□□□ 1.03
CARNMT1-202ENST00000376834 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
CARNMT1-202ENST00000376834 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
CARNMT1-202ENST00000376834 KIF21BO75037 1637 aa21.47■■□□□ 1.03
CARNMT1-202ENST00000376834 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
CARNMT1-202ENST00000376834 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
CARNMT1-202ENST00000376834 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
CARNMT1-202ENST00000376834 ESF1Q9H501 851 aaKnown RBP21.44■■□□□ 1.02
CARNMT1-202ENST00000376834 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
CARNMT1-202ENST00000376834 STAG3Q9UJ98 1225 aa21.43■■□□□ 1.02
CARNMT1-202ENST00000376834 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
CARNMT1-202ENST00000376834 HNRNPMP52272 730 aaKnown RBP eCLIP21.37■■□□□ 1.01
CARNMT1-202ENST00000376834 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
CARNMT1-202ENST00000376834 SALL2Q9Y467 1007 aaPredicted RBP21.32■■□□□ 1
CARNMT1-202ENST00000376834 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
CARNMT1-202ENST00000376834 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
CARNMT1-202ENST00000376834 PKD2Q13563 968 aa21.31■■□□□ 1
CARNMT1-202ENST00000376834 PHLDB1Q86UU1 1377 aa21.3■■□□□ 1
CARNMT1-202ENST00000376834 ZNF644Q9H582 1327 aaPredicted RBP21.29■■□□□ 1
CARNMT1-202ENST00000376834 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
CARNMT1-202ENST00000376834 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
CARNMT1-202ENST00000376834 PTPRGP23470 1445 aa21.28■■□□□ 1
CARNMT1-202ENST00000376834 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
CARNMT1-202ENST00000376834 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
CARNMT1-202ENST00000376834 MRS2Q9HD23 443 aa21.26■□□□□ 0.99
CARNMT1-202ENST00000376834 DHX57Q6P158 1386 aaKnown RBP21.26■□□□□ 0.99
CARNMT1-202ENST00000376834 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
CARNMT1-202ENST00000376834 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
CARNMT1-202ENST00000376834 EFCAB2Q5VUJ9 269 aa21.23■□□□□ 0.99
CARNMT1-202ENST00000376834 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
CARNMT1-202ENST00000376834 TMC1Q8TDI8 760 aa21.23■□□□□ 0.99
CARNMT1-202ENST00000376834 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
CARNMT1-202ENST00000376834 NUP155O75694 1391 aa21.2■□□□□ 0.98
CARNMT1-202ENST00000376834 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
CARNMT1-202ENST00000376834 GGT6Q6P531 493 aa21.19■□□□□ 0.98
CARNMT1-202ENST00000376834 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
CARNMT1-202ENST00000376834 TIMELESSQ9UNS1 1208 aa21.18■□□□□ 0.98
CARNMT1-202ENST00000376834 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
CARNMT1-202ENST00000376834 FKBP8Q14318 412 aa21.16■□□□□ 0.98
CARNMT1-202ENST00000376834 L3MBTL2Q969R5 705 aa21.16■□□□□ 0.98
CARNMT1-202ENST00000376834 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
CARNMT1-202ENST00000376834 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
CARNMT1-202ENST00000376834 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
CARNMT1-202ENST00000376834 ANKRD30AQ9BXX3 1397 aa21.13■□□□□ 0.97
CARNMT1-202ENST00000376834 ARID4BQ4LE39 1312 aaPredicted RBP21.13■□□□□ 0.97
CARNMT1-202ENST00000376834 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
CARNMT1-202ENST00000376834 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
CARNMT1-202ENST00000376834 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
CARNMT1-202ENST00000376834 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
CARNMT1-202ENST00000376834 MLECQ14165 292 aa21.11■□□□□ 0.97
CARNMT1-202ENST00000376834 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
CARNMT1-202ENST00000376834 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
CARNMT1-202ENST00000376834 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
CARNMT1-202ENST00000376834 KIF3BO15066 747 aa21.08■□□□□ 0.96
CARNMT1-202ENST00000376834 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
CARNMT1-202ENST00000376834 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
CARNMT1-202ENST00000376834 IRX6P78412 446 aaPredicted RBP21.03■□□□□ 0.96
CARNMT1-202ENST00000376834 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
CARNMT1-202ENST00000376834 NCOA2Q15596 1464 aa21.02■□□□□ 0.96
CARNMT1-202ENST00000376834 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
CARNMT1-202ENST00000376834 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
CARNMT1-202ENST00000376834 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
CARNMT1-202ENST00000376834 RSPH4AQ5TD94 716 aa20.99■□□□□ 0.95
CARNMT1-202ENST00000376834 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms