RNA–Protein interactions for RNA: ENST00000376834.7

CARNMT1-202, Transcript of carnosine N-methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARNMT1, Length 4,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARNMT1-202ENST00000376834 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
CARNMT1-202ENST00000376834 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
CARNMT1-202ENST00000376834 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
CARNMT1-202ENST00000376834 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
CARNMT1-202ENST00000376834 EHMT2Q96KQ7 1210 aa25.72■■□□□ 1.71
CARNMT1-202ENST00000376834 ABCC9O60706 1549 aa25.4■■□□□ 1.66
CARNMT1-202ENST00000376834 FAM9AQ8IZU1 332 aaPredicted RBP25.37■■□□□ 1.65
CARNMT1-202ENST00000376834 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
CARNMT1-202ENST00000376834 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
CARNMT1-202ENST00000376834 ZCCHC6Q5VYS8 1495 aaKnown RBP24.82■■□□□ 1.56
CARNMT1-202ENST00000376834 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
CARNMT1-202ENST00000376834 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
CARNMT1-202ENST00000376834 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
CARNMT1-202ENST00000376834 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
CARNMT1-202ENST00000376834 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
CARNMT1-202ENST00000376834 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.53
CARNMT1-202ENST00000376834 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
CARNMT1-202ENST00000376834 APLP2Q06481 763 aa24.38■■□□□ 1.49
CARNMT1-202ENST00000376834 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
CARNMT1-202ENST00000376834 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
CARNMT1-202ENST00000376834 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
CARNMT1-202ENST00000376834 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
CARNMT1-202ENST00000376834 TRIM26Q12899 539 aaPredicted RBP23.78■■□□□ 1.4
CARNMT1-202ENST00000376834 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
CARNMT1-202ENST00000376834 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
CARNMT1-202ENST00000376834 NACADO15069 1562 aa23.77■■□□□ 1.4
CARNMT1-202ENST00000376834 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
CARNMT1-202ENST00000376834 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
CARNMT1-202ENST00000376834 ITGAEP38570 1179 aa23.49■■□□□ 1.35
CARNMT1-202ENST00000376834 CSRNP3Q8WYN3 585 aa23.48■■□□□ 1.35
CARNMT1-202ENST00000376834 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
CARNMT1-202ENST00000376834 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
CARNMT1-202ENST00000376834 HRCP23327 699 aa23.41■■□□□ 1.34
CARNMT1-202ENST00000376834 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
CARNMT1-202ENST00000376834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
CARNMT1-202ENST00000376834 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.31
CARNMT1-202ENST00000376834 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
CARNMT1-202ENST00000376834 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
CARNMT1-202ENST00000376834 FBLN2P98095 1184 aa23.13■■□□□ 1.29
CARNMT1-202ENST00000376834 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
CARNMT1-202ENST00000376834 FAM50AQ14320 339 aaKnown RBP22.99■■□□□ 1.27
CARNMT1-202ENST00000376834 ARID3CA6NKF2 412 aa22.97■■□□□ 1.27
CARNMT1-202ENST00000376834 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
CARNMT1-202ENST00000376834 WIZO95785 1651 aa22.93■■□□□ 1.26
CARNMT1-202ENST00000376834 CCDC88BA6NC98 1476 aa22.91■■□□□ 1.26
CARNMT1-202ENST00000376834 YTHDC1Q96MU7 727 aaKnown RBP22.8■■□□□ 1.24
CARNMT1-202ENST00000376834 SOGA1O94964 1423 aa22.76■■□□□ 1.23
CARNMT1-202ENST00000376834 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
CARNMT1-202ENST00000376834 ABCC8Q09428 1581 aa22.74■■□□□ 1.23
CARNMT1-202ENST00000376834 CLIP1P30622 1438 aa22.64■■□□□ 1.22
CARNMT1-202ENST00000376834 NEUROD1Q13562 356 aa22.64■■□□□ 1.21
CARNMT1-202ENST00000376834 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
CARNMT1-202ENST00000376834 CEP162Q5TB80 1403 aa22.63■■□□□ 1.21
CARNMT1-202ENST00000376834 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
CARNMT1-202ENST00000376834 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
CARNMT1-202ENST00000376834 EEA1Q15075 1411 aa22.6■■□□□ 1.21
CARNMT1-202ENST00000376834 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
CARNMT1-202ENST00000376834 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
CARNMT1-202ENST00000376834 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
CARNMT1-202ENST00000376834 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
CARNMT1-202ENST00000376834 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
CARNMT1-202ENST00000376834 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
CARNMT1-202ENST00000376834 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
CARNMT1-202ENST00000376834 POLR3GLQ9BT43 218 aa22.5■■□□□ 1.19
CARNMT1-202ENST00000376834 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
CARNMT1-202ENST00000376834 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
CARNMT1-202ENST00000376834 ZNF777Q9ULD5 760 aaPredicted RBP22.46■■□□□ 1.19
CARNMT1-202ENST00000376834 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
CARNMT1-202ENST00000376834 CUX2O14529 1486 aa22.38■■□□□ 1.17
CARNMT1-202ENST00000376834 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
CARNMT1-202ENST00000376834 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
CARNMT1-202ENST00000376834 CHIC2Q9UKJ5 165 aa22.33■■□□□ 1.16
CARNMT1-202ENST00000376834 CDK11AQ9UQ88 783 aaPredicted RBP22.33■■□□□ 1.16
CARNMT1-202ENST00000376834 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
CARNMT1-202ENST00000376834 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
CARNMT1-202ENST00000376834 MTUS2Q5JR59 1369 aa22.26■■□□□ 1.15
CARNMT1-202ENST00000376834 ZNF326Q5BKZ1 582 aaKnown RBP22.25■■□□□ 1.15
CARNMT1-202ENST00000376834 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
CARNMT1-202ENST00000376834 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
CARNMT1-202ENST00000376834 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
CARNMT1-202ENST00000376834 EIF4G1Q04637 1599 aaKnown RBP22.17■■□□□ 1.14
CARNMT1-202ENST00000376834 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
CARNMT1-202ENST00000376834 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
CARNMT1-202ENST00000376834 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
CARNMT1-202ENST00000376834 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
CARNMT1-202ENST00000376834 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
CARNMT1-202ENST00000376834 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.12
CARNMT1-202ENST00000376834 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
CARNMT1-202ENST00000376834 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
CARNMT1-202ENST00000376834 KCNH8Q96L42 1107 aa22.03■■□□□ 1.12
CARNMT1-202ENST00000376834 VPS8Q8N3P4 1428 aa22.01■■□□□ 1.11
CARNMT1-202ENST00000376834 NEFLP07196 543 aa21.98■■□□□ 1.11
CARNMT1-202ENST00000376834 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
CARNMT1-202ENST00000376834 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
CARNMT1-202ENST00000376834 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
CARNMT1-202ENST00000376834 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
CARNMT1-202ENST00000376834 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
CARNMT1-202ENST00000376834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■□□□□ 11.3
CARNMT1-202ENST00000376834 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
CARNMT1-202ENST00000376834 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms