RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
PCCA-202ENST00000376285 ERCC6Q03468 1493 aa27.6■■■□□ 2.01
PCCA-202ENST00000376285 IFT140Q96RY7 1462 aa27.6■■■□□ 2.01
PCCA-202ENST00000376285 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
PCCA-202ENST00000376285 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.01
PCCA-202ENST00000376285 KANK4Q5T7N3 995 aaPredicted RBP27.58■■■□□ 2.01
PCCA-202ENST00000376285 ADAMTS12P58397 1594 aa27.55■■■□□ 2
PCCA-202ENST00000376285 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
PCCA-202ENST00000376285 MAP3K1Q13233 1512 aa27.53■■■□□ 2
PCCA-202ENST00000376285 TIAM1Q13009 1591 aa27.53■■■□□ 2
PCCA-202ENST00000376285 PCF11O94913 1555 aaKnown RBP27.53■■■□□ 2
PCCA-202ENST00000376285 ZNF608Q9ULD9 1512 aaPredicted RBP27.52■■■□□ 2
PCCA-202ENST00000376285 FHOD3Q2V2M9 1422 aa27.52■■■□□ 2
PCCA-202ENST00000376285 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
PCCA-202ENST00000376285 SAMD9Q5K651 1589 aa27.49■■□□□ 1.99
PCCA-202ENST00000376285 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
PCCA-202ENST00000376285 CFAP43Q8NDM7 1665 aa27.48■■□□□ 1.99
PCCA-202ENST00000376285 EIF4G3O43432 1585 aaKnown RBP27.44■■□□□ 1.98
PCCA-202ENST00000376285 FYCO1Q9BQS8 1478 aa27.42■■□□□ 1.98
PCCA-202ENST00000376285 RRBP1Q9P2E9 1410 aaKnown RBP27.39■■□□□ 1.97
PCCA-202ENST00000376285 CASKIN1Q8WXD9 1431 aa27.38■■□□□ 1.97
PCCA-202ENST00000376285 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
PCCA-202ENST00000376285 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
PCCA-202ENST00000376285 FMN1Q68DA7 1419 aa27.37■■□□□ 1.97
PCCA-202ENST00000376285 IQGAP2Q13576 1575 aa27.35■■□□□ 1.97
PCCA-202ENST00000376285 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
PCCA-202ENST00000376285 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
PCCA-202ENST00000376285 DIEXFQ68CQ4 756 aaKnown RBP27.28■■□□□ 1.96
PCCA-202ENST00000376285 LRRIQ1Q96JM4 1722 aa27.28■■□□□ 1.96
PCCA-202ENST00000376285 CCNB3Q8WWL7 1395 aa27.25■■□□□ 1.95
PCCA-202ENST00000376285 ATP1B4Q9UN42 357 aaPredicted RBP27.25■■□□□ 1.95
PCCA-202ENST00000376285 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
PCCA-202ENST00000376285 MAGI1Q96QZ7 1491 aaPredicted RBP27.22■■□□□ 1.95
PCCA-202ENST00000376285 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
PCCA-202ENST00000376285 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
PCCA-202ENST00000376285 PHLDB1Q86UU1 1377 aa27.17■■□□□ 1.94
PCCA-202ENST00000376285 KIAA0586Q9BVV6 1533 aa27.16■■□□□ 1.94
PCCA-202ENST00000376285 DHX57Q6P158 1386 aaKnown RBP27.14■■□□□ 1.93
PCCA-202ENST00000376285 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
PCCA-202ENST00000376285 CLSPNQ9HAW4 1339 aa27.1■■□□□ 1.93
PCCA-202ENST00000376285 CEP170Q5SW79 1584 aa27.08■■□□□ 1.93
PCCA-202ENST00000376285 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
PCCA-202ENST00000376285 HECW1Q76N89 1606 aa27.08■■□□□ 1.93
PCCA-202ENST00000376285 DISP1Q96F81 1524 aa27.05■■□□□ 1.92
PCCA-202ENST00000376285 CCDC18Q5T9S5 1454 aa27.03■■□□□ 1.92
PCCA-202ENST00000376285 MTUS2Q5JR59 1369 aa27.03■■□□□ 1.92
PCCA-202ENST00000376285 CHMP7Q8WUX9 453 aaPredicted RBP27.02■■□□□ 1.92
PCCA-202ENST00000376285 EHBP1L1Q8N3D4 1523 aa27.01■■□□□ 1.91
PCCA-202ENST00000376285 SUPT6HQ7KZ85 1726 aaKnown RBP27■■□□□ 1.91
PCCA-202ENST00000376285 ITGAEP38570 1179 aa26.98■■□□□ 1.91
PCCA-202ENST00000376285 NUP160Q12769 1436 aa26.97■■□□□ 1.91
PCCA-202ENST00000376285 MAGI3Q5TCQ9 1506 aa26.97■■□□□ 1.91
PCCA-202ENST00000376285 EPRSP07814 1512 aaKnown RBP26.96■■□□□ 1.91
PCCA-202ENST00000376285 FBLN2P98095 1184 aa26.93■■□□□ 1.9
PCCA-202ENST00000376285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.93■■□□□ 1.9
PCCA-202ENST00000376285 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
PCCA-202ENST00000376285 FGD6Q6ZV73 1430 aa26.92■■□□□ 1.9
PCCA-202ENST00000376285 FAM50AQ14320 339 aaKnown RBP26.92■■□□□ 1.9
PCCA-202ENST00000376285 CDK13Q14004 1512 aaKnown RBP26.9■■□□□ 1.9
PCCA-202ENST00000376285 ARHGEF11O15085 1522 aa26.89■■□□□ 1.9
PCCA-202ENST00000376285 RAPGEF6Q8TEU7 1601 aa26.88■■□□□ 1.89
PCCA-202ENST00000376285 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
PCCA-202ENST00000376285 MYOM3Q5VTT5 1437 aa26.85■■□□□ 1.89
PCCA-202ENST00000376285 ACIN1Q9UKV3 1341 aaKnown RBP26.85■■□□□ 1.89
PCCA-202ENST00000376285 NEUROD1Q13562 356 aa26.82■■□□□ 1.88
PCCA-202ENST00000376285 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
PCCA-202ENST00000376285 NUP153P49790 1475 aaKnown RBP26.82■■□□□ 1.88
PCCA-202ENST00000376285 CHD1O14646 1710 aa26.8■■□□□ 1.88
PCCA-202ENST00000376285 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
PCCA-202ENST00000376285 PTPN23Q9H3S7 1636 aa26.78■■□□□ 1.88
PCCA-202ENST00000376285 CARMIL2Q6F5E8 1435 aa26.78■■□□□ 1.88
PCCA-202ENST00000376285 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
PCCA-202ENST00000376285 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
PCCA-202ENST00000376285 CENPBP07199 599 aaPredicted RBP26.74■■□□□ 1.87
PCCA-202ENST00000376285 MIER1Q8N108 512 aa26.73■■□□□ 1.87
PCCA-202ENST00000376285 PLB1Q6P1J6 1458 aa26.71■■□□□ 1.87
PCCA-202ENST00000376285 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
PCCA-202ENST00000376285 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
PCCA-202ENST00000376285 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
PCCA-202ENST00000376285 ABCA8O94911 1581 aa26.63■■□□□ 1.85
PCCA-202ENST00000376285 HFM1A2PYH4 1435 aa26.6■■□□□ 1.85
PCCA-202ENST00000376285 CDK11AQ9UQ88 783 aaPredicted RBP26.58■■□□□ 1.85
PCCA-202ENST00000376285 SHROOM2Q13796 1616 aa26.58■■□□□ 1.85
PCCA-202ENST00000376285 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.85
PCCA-202ENST00000376285 ADCY10Q96PN6 1610 aa26.57■■□□□ 1.84
PCCA-202ENST00000376285 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
PCCA-202ENST00000376285 GTF3C3Q9Y5Q9 886 aa26.56■■□□□ 1.84
PCCA-202ENST00000376285 NAIPQ13075 1403 aa26.53■■□□□ 1.84
PCCA-202ENST00000376285 YTHDC1Q96MU7 727 aaKnown RBP26.53■■□□□ 1.84
PCCA-202ENST00000376285 GCC2Q8IWJ2 1684 aa26.52■■□□□ 1.84
PCCA-202ENST00000376285 KIF14Q15058 1648 aa26.51■■□□□ 1.83
PCCA-202ENST00000376285 ITSN2Q9NZM3 1697 aa26.5■■□□□ 1.83
PCCA-202ENST00000376285 SIN3AQ96ST3 1273 aa26.47■■□□□ 1.83
PCCA-202ENST00000376285 ATP10BO94823 1461 aa26.46■■□□□ 1.83
PCCA-202ENST00000376285 PTPRGP23470 1445 aa26.46■■□□□ 1.83
PCCA-202ENST00000376285 DNMT1P26358 1616 aaKnown RBP26.45■■□□□ 1.82
PCCA-202ENST00000376285 AKNAQ7Z591 1439 aa26.45■■□□□ 1.82
PCCA-202ENST00000376285 UACAQ9BZF9 1416 aa26.43■■□□□ 1.82
PCCA-202ENST00000376285 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
PCCA-202ENST00000376285 ERCC6L2Q5T890 1561 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms