RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 ERCC6L2Q5T890 1561 aa33.95■■■■□ 3.03
C6orf48-205ENST00000375640 KIAA0586Q9BVV6 1533 aa33.94■■■■□ 3.02
C6orf48-205ENST00000375640 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
C6orf48-205ENST00000375640 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
C6orf48-205ENST00000375640 RAPGEF2Q9Y4G8 1499 aa33.79■■■■□ 3
C6orf48-205ENST00000375640 CARMIL2Q6F5E8 1435 aa33.62■■■□□ 2.97
C6orf48-205ENST00000375640 PRXQ9BXM0 1461 aa33.61■■■□□ 2.97
C6orf48-205ENST00000375640 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
C6orf48-205ENST00000375640 IQGAP2Q13576 1575 aa33.58■■■□□ 2.97
C6orf48-205ENST00000375640 PTPRGP23470 1445 aa33.57■■■□□ 2.96
C6orf48-205ENST00000375640 NPM1P06748 294 aaKnown RBP eCLIP33.56■■■□□ 2.96
C6orf48-205ENST00000375640 TNIKQ9UKE5 1360 aa33.55■■■□□ 2.96
C6orf48-205ENST00000375640 EEA1Q15075 1411 aa33.49■■■□□ 2.95
C6orf48-205ENST00000375640 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
C6orf48-205ENST00000375640 TTBK1Q5TCY1 1321 aaPredicted RBP33.47■■■□□ 2.95
C6orf48-205ENST00000375640 UGGT2Q9NYU1 1516 aa33.46■■■□□ 2.95
C6orf48-205ENST00000375640 DISP1Q96F81 1524 aa33.44■■■□□ 2.94
C6orf48-205ENST00000375640 FAM9AQ8IZU1 332 aaPredicted RBP33.36■■■□□ 2.93
C6orf48-205ENST00000375640 ADCY10Q96PN6 1610 aa33.34■■■□□ 2.93
C6orf48-205ENST00000375640 UACAQ9BZF9 1416 aa33.3■■■□□ 2.92
C6orf48-205ENST00000375640 GOLGA3Q08378 1498 aa33.29■■■□□ 2.92
C6orf48-205ENST00000375640 MAPKBP1O60336 1514 aa33.28■■■□□ 2.92
C6orf48-205ENST00000375640 UHRF1BP1LA0JNW5 1464 aa33.26■■■□□ 2.92
C6orf48-205ENST00000375640 FAM69CQ0P6D2 419 aa33.26■■■□□ 2.91
C6orf48-205ENST00000375640 KIAA0556O60303 1618 aa33.24■■■□□ 2.91
C6orf48-205ENST00000375640 ABCC10Q5T3U5 1492 aa33.23■■■□□ 2.91
C6orf48-205ENST00000375640 ABCC2Q92887 1545 aa33.23■■■□□ 2.91
C6orf48-205ENST00000375640 CTTNBP2Q8WZ74 1663 aa33.21■■■□□ 2.91
C6orf48-205ENST00000375640 P3H3Q8IVL6 736 aa33.1■■■□□ 2.89
C6orf48-205ENST00000375640 KDM5BQ9UGL1 1544 aa33.08■■■□□ 2.89
C6orf48-205ENST00000375640 PLB1Q6P1J6 1458 aa33.08■■■□□ 2.89
C6orf48-205ENST00000375640 ASXL2Q76L83 1435 aa33.07■■■□□ 2.88
C6orf48-205ENST00000375640 DIP2BQ9P265 1576 aa33.03■■■□□ 2.88
C6orf48-205ENST00000375640 KIF21BO75037 1637 aa33.02■■■□□ 2.88
C6orf48-205ENST00000375640 KIF13AQ9H1H9 1805 aa33■■■□□ 2.87
C6orf48-205ENST00000375640 RANGAP1P46060 587 aaPredicted RBP32.99■■■□□ 2.87
C6orf48-205ENST00000375640 UBTFP17480 764 aaKnown RBP32.97■■■□□ 2.87
C6orf48-205ENST00000375640 ABCA8O94911 1581 aa32.96■■■□□ 2.87
C6orf48-205ENST00000375640 EHMT2Q96KQ7 1210 aa32.91■■■□□ 2.86
C6orf48-205ENST00000375640 SAMD9Q5K651 1589 aa32.91■■■□□ 2.86
C6orf48-205ENST00000375640 ZCCHC11Q5TAX3 1644 aaKnown RBP32.86■■■□□ 2.85
C6orf48-205ENST00000375640 GLI2P10070 1586 aa32.86■■■□□ 2.85
C6orf48-205ENST00000375640 EPRSP07814 1512 aaKnown RBP32.85■■■□□ 2.85
C6orf48-205ENST00000375640 WDR7Q9Y4E6 1490 aa32.82■■■□□ 2.84
C6orf48-205ENST00000375640 FHOD3Q2V2M9 1422 aa32.8■■■□□ 2.84
C6orf48-205ENST00000375640 ARID3CA6NKF2 412 aa32.79■■■□□ 2.84
C6orf48-205ENST00000375640 KCNH8Q96L42 1107 aa32.78■■■□□ 2.84
C6orf48-205ENST00000375640 ATP10BO94823 1461 aa32.78■■■□□ 2.84
C6orf48-205ENST00000375640 EFCAB5A4FU69 1503 aa32.77■■■□□ 2.84
C6orf48-205ENST00000375640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.7■■■□□ 2.83
C6orf48-205ENST00000375640 HNRNPUL2Q1KMD3 747 aaKnown RBP32.7■■■□□ 2.83
C6orf48-205ENST00000375640 RAPGEF6Q8TEU7 1601 aa32.66■■■□□ 2.82
C6orf48-205ENST00000375640 NUP153P49790 1475 aaKnown RBP32.64■■■□□ 2.82
C6orf48-205ENST00000375640 CD109Q6YHK3 1445 aa32.62■■■□□ 2.81
C6orf48-205ENST00000375640 TEX14Q8IWB6 1497 aa32.61■■■□□ 2.81
C6orf48-205ENST00000375640 TSPOAP1O95153 1857 aa32.61■■■□□ 2.81
C6orf48-205ENST00000375640 KDM6BO15054 1643 aa32.59■■■□□ 2.81
C6orf48-205ENST00000375640 MAP3K4Q9Y6R4 1608 aa32.59■■■□□ 2.81
C6orf48-205ENST00000375640 ARHGAP35Q9NRY4 1499 aa32.59■■■□□ 2.81
C6orf48-205ENST00000375640 PLEKHD1A6NEE1 506 aa32.57■■■□□ 2.8
C6orf48-205ENST00000375640 FMN1Q68DA7 1419 aa32.56■■■□□ 2.8
C6orf48-205ENST00000375640 PPRC1Q5VV67 1664 aaKnown RBP32.54■■■□□ 2.8
C6orf48-205ENST00000375640 MAGI3Q5TCQ9 1506 aa32.54■■■□□ 2.8
C6orf48-205ENST00000375640 ATP1B4Q9UN42 357 aaPredicted RBP32.48■■■□□ 2.79
C6orf48-205ENST00000375640 COL17A1Q9UMD9 1497 aaPredicted RBP32.48■■■□□ 2.79
C6orf48-205ENST00000375640 CFAP43Q8NDM7 1665 aa32.43■■■□□ 2.78
C6orf48-205ENST00000375640 AEBP2Q6ZN18 517 aaPredicted RBP32.41■■■□□ 2.78
C6orf48-205ENST00000375640 CDK11AQ9UQ88 783 aaPredicted RBP32.38■■■□□ 2.77
C6orf48-205ENST00000375640 PHLDB1Q86UU1 1377 aa32.37■■■□□ 2.77
C6orf48-205ENST00000375640 ABCA9Q8IUA7 1624 aa32.35■■■□□ 2.77
C6orf48-205ENST00000375640 CLIP1P30622 1438 aa32.33■■■□□ 2.77
C6orf48-205ENST00000375640 CDK13Q14004 1512 aaKnown RBP32.31■■■□□ 2.76
C6orf48-205ENST00000375640 HECW1Q76N89 1606 aa32.29■■■□□ 2.76
C6orf48-205ENST00000375640 ARAP3Q8WWN8 1544 aa32.26■■■□□ 2.76
C6orf48-205ENST00000375640 CASKIN1Q8WXD9 1431 aa32.26■■■□□ 2.75
C6orf48-205ENST00000375640 NEO1Q92859 1461 aa32.24■■■□□ 2.75
C6orf48-205ENST00000375640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.2■■■□□ 2.74
C6orf48-205ENST00000375640 KDM4FA0A1W2PPD8 638 aa32.19■■■□□ 2.74
C6orf48-205ENST00000375640 RAPGEF3O95398 923 aa32.16■■■□□ 2.74
C6orf48-205ENST00000375640 TROQ12816 1431 aaPredicted RBP32.16■■■□□ 2.74
C6orf48-205ENST00000375640 CCDC18Q5T9S5 1454 aa32.12■■■□□ 2.73
C6orf48-205ENST00000375640 PLCH2O75038 1416 aa32.12■■■□□ 2.73
C6orf48-205ENST00000375640 LOC105371045A0A1W2PR82 267 aa32.12■■■□□ 2.73
C6orf48-205ENST00000375640 AKNAQ7Z591 1439 aa32.11■■■□□ 2.73
C6orf48-205ENST00000375640 FANCAO15360 1455 aa32.1■■■□□ 2.73
C6orf48-205ENST00000375640 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
C6orf48-205ENST00000375640 CEP162Q5TB80 1403 aa32.08■■■□□ 2.73
C6orf48-205ENST00000375640 PCF11O94913 1555 aaKnown RBP32.07■■■□□ 2.72
C6orf48-205ENST00000375640 EFCAB2Q5VUJ9 269 aa32.07■■■□□ 2.72
C6orf48-205ENST00000375640 TTC37Q6PGP7 1564 aa32.07■■■□□ 2.72
C6orf48-205ENST00000375640 DENND4BO75064 1496 aaPredicted RBP32.03■■■□□ 2.72
C6orf48-205ENST00000375640 KIF14Q15058 1648 aa31.97■■■□□ 2.71
C6orf48-205ENST00000375640 CFAP74Q9C0B2 1584 aa31.96■■■□□ 2.71
C6orf48-205ENST00000375640 ADGRL1O94910 1474 aa31.96■■■□□ 2.71
C6orf48-205ENST00000375640 SCAPERQ9BY12 1400 aa31.94■■■□□ 2.7
C6orf48-205ENST00000375640 LRRIQ1Q96JM4 1722 aa31.94■■■□□ 2.7
C6orf48-205ENST00000375640 FRMPD1Q5SYB0 1578 aa31.88■■■□□ 2.69
C6orf48-205ENST00000375640 ARHGAP5Q13017 1502 aa31.85■■■□□ 2.69
C6orf48-205ENST00000375640 POGZQ7Z3K3 1410 aa31.83■■■□□ 2.69
C6orf48-205ENST00000375640 MTUS2Q5JR59 1369 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms