RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 SHROOM2Q13796 1616 aa38.37■■■■□ 3.73
SUSD3-202ENST00000375472 CSRNP3Q8WYN3 585 aa38.36■■■■□ 3.73
SUSD3-202ENST00000375472 JPH4Q96JJ6 628 aa38.33■■■■□ 3.73
SUSD3-202ENST00000375472 PRXQ9BXM0 1461 aa38.33■■■■□ 3.73
SUSD3-202ENST00000375472 ARAP1Q96P48 1450 aa38.29■■■■□ 3.72
SUSD3-202ENST00000375472 CYB5RLQ6IPT4 315 aa38.26■■■■□ 3.72
SUSD3-202ENST00000375472 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
SUSD3-202ENST00000375472 IQGAP2Q13576 1575 aa38.15■■■■□ 3.7
SUSD3-202ENST00000375472 ERCC6L2Q5T890 1561 aa38.15■■■■□ 3.7
SUSD3-202ENST00000375472 FAM9AQ8IZU1 332 aaPredicted RBP38.14■■■■□ 3.7
SUSD3-202ENST00000375472 CTTNBP2Q8WZ74 1663 aa38.03■■■■□ 3.68
SUSD3-202ENST00000375472 CARMIL2Q6F5E8 1435 aa38.01■■■■□ 3.68
SUSD3-202ENST00000375472 KIF21BO75037 1637 aa37.98■■■■□ 3.67
SUSD3-202ENST00000375472 UGGT2Q9NYU1 1516 aa37.97■■■■□ 3.67
SUSD3-202ENST00000375472 DISP1Q96F81 1524 aa37.85■■■■□ 3.65
SUSD3-202ENST00000375472 TNIKQ9UKE5 1360 aa37.84■■■■□ 3.65
SUSD3-202ENST00000375472 GOLGA3Q08378 1498 aa37.82■■■■□ 3.64
SUSD3-202ENST00000375472 PTPRGP23470 1445 aa37.8■■■■□ 3.64
SUSD3-202ENST00000375472 KIAA0556O60303 1618 aa37.77■■■■□ 3.64
SUSD3-202ENST00000375472 UBTFP17480 764 aaKnown RBP37.67■■■■□ 3.62
SUSD3-202ENST00000375472 TTBK1Q5TCY1 1321 aaPredicted RBP37.62■■■■□ 3.61
SUSD3-202ENST00000375472 NPM1P06748 294 aaKnown RBP eCLIP37.59■■■■□ 3.61
SUSD3-202ENST00000375472 ADCY10Q96PN6 1610 aa37.58■■■■□ 3.61
SUSD3-202ENST00000375472 EHMT2Q96KQ7 1210 aa37.57■■■■□ 3.6
SUSD3-202ENST00000375472 SAMD9Q5K651 1589 aa37.56■■■■□ 3.6
SUSD3-202ENST00000375472 UACAQ9BZF9 1416 aa37.55■■■■□ 3.6
SUSD3-202ENST00000375472 UHRF1BP1LA0JNW5 1464 aa37.53■■■■□ 3.6
SUSD3-202ENST00000375472 EFCAB5A4FU69 1503 aa37.47■■■■□ 3.59
SUSD3-202ENST00000375472 ABCC2Q92887 1545 aa37.46■■■■□ 3.59
SUSD3-202ENST00000375472 TRHP20396 242 aaPredicted RBP37.46■■■■□ 3.59
SUSD3-202ENST00000375472 P3H3Q8IVL6 736 aa37.46■■■■□ 3.59
SUSD3-202ENST00000375472 RANGAP1P46060 587 aaPredicted RBP37.45■■■■□ 3.59
SUSD3-202ENST00000375472 MAPKBP1O60336 1514 aa37.4■■■■□ 3.58
SUSD3-202ENST00000375472 PLB1Q6P1J6 1458 aa37.37■■■■□ 3.57
SUSD3-202ENST00000375472 ABCA8O94911 1581 aa37.36■■■■□ 3.57
SUSD3-202ENST00000375472 KDM5BQ9UGL1 1544 aa37.33■■■■□ 3.57
SUSD3-202ENST00000375472 FHOD3Q2V2M9 1422 aa37.31■■■■□ 3.56
SUSD3-202ENST00000375472 ARHGAP35Q9NRY4 1499 aa37.24■■■■□ 3.55
SUSD3-202ENST00000375472 ZCCHC11Q5TAX3 1644 aaKnown RBP37.2■■■■□ 3.55
SUSD3-202ENST00000375472 ABCC10Q5T3U5 1492 aa37.2■■■■□ 3.54
SUSD3-202ENST00000375472 RAPGEF6Q8TEU7 1601 aa37.18■■■■□ 3.54
SUSD3-202ENST00000375472 ASXL2Q76L83 1435 aa37.18■■■■□ 3.54
SUSD3-202ENST00000375472 FMN1Q68DA7 1419 aa37.15■■■■□ 3.54
SUSD3-202ENST00000375472 FAM69CQ0P6D2 419 aa37.11■■■■□ 3.53
SUSD3-202ENST00000375472 DIP2BQ9P265 1576 aa37.1■■■■□ 3.53
SUSD3-202ENST00000375472 KIF13AQ9H1H9 1805 aa37.1■■■■□ 3.53
SUSD3-202ENST00000375472 AEBP2Q6ZN18 517 aaPredicted RBP37.08■■■■□ 3.53
SUSD3-202ENST00000375472 CLIP1P30622 1438 aa37.08■■■■□ 3.53
SUSD3-202ENST00000375472 ATP10BO94823 1461 aa37.06■■■■□ 3.52
SUSD3-202ENST00000375472 NUP153P49790 1475 aaKnown RBP37.04■■■■□ 3.52
SUSD3-202ENST00000375472 WDR7Q9Y4E6 1490 aa37.02■■■■□ 3.52
SUSD3-202ENST00000375472 LOC105371045A0A1W2PR82 267 aa36.99■■■■□ 3.51
SUSD3-202ENST00000375472 GLI2P10070 1586 aa36.98■■■■□ 3.51
SUSD3-202ENST00000375472 EPRSP07814 1512 aaKnown RBP36.96■■■■□ 3.51
SUSD3-202ENST00000375472 ARID3CA6NKF2 412 aa36.96■■■■□ 3.51
SUSD3-202ENST00000375472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.94■■■■□ 3.5
SUSD3-202ENST00000375472 HNRNPUL2Q1KMD3 747 aaKnown RBP36.94■■■■□ 3.5
SUSD3-202ENST00000375472 CEP162Q5TB80 1403 aa36.92■■■■□ 3.5
SUSD3-202ENST00000375472 HECW1Q76N89 1606 aa36.91■■■■□ 3.5
SUSD3-202ENST00000375472 ATP1B4Q9UN42 357 aaPredicted RBP36.85■■■■□ 3.49
SUSD3-202ENST00000375472 CASKIN1Q8WXD9 1431 aa36.84■■■■□ 3.49
SUSD3-202ENST00000375472 KCNH8Q96L42 1107 aa36.83■■■■□ 3.49
SUSD3-202ENST00000375472 PLEKHD1A6NEE1 506 aa36.82■■■■□ 3.48
SUSD3-202ENST00000375472 MAP3K4Q9Y6R4 1608 aa36.76■■■■□ 3.48
SUSD3-202ENST00000375472 CDK11AQ9UQ88 783 aaPredicted RBP36.75■■■■□ 3.47
SUSD3-202ENST00000375472 FYCO1Q9BQS8 1478 aa36.75■■■■□ 3.47
SUSD3-202ENST00000375472 CDK13Q14004 1512 aaKnown RBP36.75■■■■□ 3.47
SUSD3-202ENST00000375472 PCF11O94913 1555 aaKnown RBP36.74■■■■□ 3.47
SUSD3-202ENST00000375472 TSPOAP1O95153 1857 aa36.73■■■■□ 3.47
SUSD3-202ENST00000375472 CFAP43Q8NDM7 1665 aa36.71■■■■□ 3.47
SUSD3-202ENST00000375472 CCDC18Q5T9S5 1454 aa36.7■■■■□ 3.47
SUSD3-202ENST00000375472 CD109Q6YHK3 1445 aa36.68■■■■□ 3.46
SUSD3-202ENST00000375472 TEX14Q8IWB6 1497 aa36.67■■■■□ 3.46
SUSD3-202ENST00000375472 PPRC1Q5VV67 1664 aaKnown RBP36.64■■■■□ 3.46
SUSD3-202ENST00000375472 ABCA9Q8IUA7 1624 aa36.63■■■■□ 3.45
SUSD3-202ENST00000375472 MAGI3Q5TCQ9 1506 aa36.62■■■■□ 3.45
SUSD3-202ENST00000375472 LRRIQ1Q96JM4 1722 aa36.6■■■■□ 3.45
SUSD3-202ENST00000375472 TROQ12816 1431 aaPredicted RBP36.54■■■■□ 3.44
SUSD3-202ENST00000375472 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.43
SUSD3-202ENST00000375472 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.49■■■■□ 3.43
SUSD3-202ENST00000375472 KDM6BO15054 1643 aa36.48■■■■□ 3.43
SUSD3-202ENST00000375472 PHLDB1Q86UU1 1377 aa36.44■■■■□ 3.42
SUSD3-202ENST00000375472 KIF14Q15058 1648 aa36.44■■■■□ 3.42
SUSD3-202ENST00000375472 TTC37Q6PGP7 1564 aa36.4■■■■□ 3.42
SUSD3-202ENST00000375472 NEO1Q92859 1461 aa36.37■■■■□ 3.41
SUSD3-202ENST00000375472 PLCH2O75038 1416 aa36.33■■■■□ 3.41
SUSD3-202ENST00000375472 MTUS2Q5JR59 1369 aa36.31■■■■□ 3.4
SUSD3-202ENST00000375472 ARAP3Q8WWN8 1544 aa36.3■■■■□ 3.4
SUSD3-202ENST00000375472 COL17A1Q9UMD9 1497 aaPredicted RBP36.3■■■■□ 3.4
SUSD3-202ENST00000375472 CFAP74Q9C0B2 1584 aa36.29■■■■□ 3.4
SUSD3-202ENST00000375472 FANCAO15360 1455 aa36.28■■■■□ 3.4
SUSD3-202ENST00000375472 MYO5CQ9NQX4 1742 aa36.27■■■■□ 3.4
SUSD3-202ENST00000375472 EHBP1L1Q8N3D4 1523 aa36.24■■■■□ 3.39
SUSD3-202ENST00000375472 MAP3K1Q13233 1512 aa36.23■■■■□ 3.39
SUSD3-202ENST00000375472 TIAM1Q13009 1591 aa36.23■■■■□ 3.39
SUSD3-202ENST00000375472 EFCAB2Q5VUJ9 269 aa36.22■■■■□ 3.39
SUSD3-202ENST00000375472 AKNAQ7Z591 1439 aa36.22■■■■□ 3.39
SUSD3-202ENST00000375472 APLP2Q06481 763 aa36.15■■■■□ 3.38
SUSD3-202ENST00000375472 ARHGAP5Q13017 1502 aa36.14■■■■□ 3.38
SUSD3-202ENST00000375472 PREX2Q70Z35 1606 aa36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms