RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 JPH4Q96JJ6 628 aa24.96■■□□□ 1.59
PFDN6-203ENST00000374610 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
PFDN6-203ENST00000374610 KIF21BO75037 1637 aa24.93■■□□□ 1.58
PFDN6-203ENST00000374610 UBTFP17480 764 aaKnown RBP24.91■■□□□ 1.58
PFDN6-203ENST00000374610 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
PFDN6-203ENST00000374610 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
PFDN6-203ENST00000374610 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
PFDN6-203ENST00000374610 IQGAP2Q13576 1575 aa24.9■■□□□ 1.58
PFDN6-203ENST00000374610 CTTNBP2Q8WZ74 1663 aa24.88■■□□□ 1.57
PFDN6-203ENST00000374610 PRG4Q92954 1404 aaPredicted RBP24.87■■□□□ 1.57
PFDN6-203ENST00000374610 GOLGA3Q08378 1498 aa24.86■■□□□ 1.57
PFDN6-203ENST00000374610 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
PFDN6-203ENST00000374610 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
PFDN6-203ENST00000374610 CARMIL2Q6F5E8 1435 aa24.8■■□□□ 1.56
PFDN6-203ENST00000374610 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
PFDN6-203ENST00000374610 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
PFDN6-203ENST00000374610 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
PFDN6-203ENST00000374610 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
PFDN6-203ENST00000374610 UGGT2Q9NYU1 1516 aa24.72■■□□□ 1.55
PFDN6-203ENST00000374610 P3H3Q8IVL6 736 aa24.65■■□□□ 1.54
PFDN6-203ENST00000374610 DISP1Q96F81 1524 aa24.65■■□□□ 1.54
PFDN6-203ENST00000374610 TNIKQ9UKE5 1360 aa24.65■■□□□ 1.54
PFDN6-203ENST00000374610 KIAA0556O60303 1618 aa24.64■■□□□ 1.53
PFDN6-203ENST00000374610 PTPRGP23470 1445 aa24.63■■□□□ 1.53
PFDN6-203ENST00000374610 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.53
PFDN6-203ENST00000374610 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
PFDN6-203ENST00000374610 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
PFDN6-203ENST00000374610 NPM1P06748 294 aaKnown RBP eCLIP24.51■■□□□ 1.51
PFDN6-203ENST00000374610 FHOD3Q2V2M9 1422 aa24.47■■□□□ 1.51
PFDN6-203ENST00000374610 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
PFDN6-203ENST00000374610 CLIP1P30622 1438 aa24.44■■□□□ 1.5
PFDN6-203ENST00000374610 ARHGAP35Q9NRY4 1499 aa24.42■■□□□ 1.5
PFDN6-203ENST00000374610 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.49
PFDN6-203ENST00000374610 PLB1Q6P1J6 1458 aa24.38■■□□□ 1.49
PFDN6-203ENST00000374610 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
PFDN6-203ENST00000374610 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
PFDN6-203ENST00000374610 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
PFDN6-203ENST00000374610 UHRF1BP1LA0JNW5 1464 aa24.35■■□□□ 1.49
PFDN6-203ENST00000374610 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
PFDN6-203ENST00000374610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.32■■□□□ 1.48
PFDN6-203ENST00000374610 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
PFDN6-203ENST00000374610 ABCA8O94911 1581 aa24.32■■□□□ 1.48
PFDN6-203ENST00000374610 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
PFDN6-203ENST00000374610 RAPGEF6Q8TEU7 1601 aa24.31■■□□□ 1.48
PFDN6-203ENST00000374610 TRHP20396 242 aaPredicted RBP24.3■■□□□ 1.48
PFDN6-203ENST00000374610 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
PFDN6-203ENST00000374610 ZCCHC11Q5TAX3 1644 aaKnown RBP24.22■■□□□ 1.47
PFDN6-203ENST00000374610 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
PFDN6-203ENST00000374610 MAPKBP1O60336 1514 aa24.18■■□□□ 1.46
PFDN6-203ENST00000374610 NUP153P49790 1475 aaKnown RBP24.17■■□□□ 1.46
PFDN6-203ENST00000374610 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
PFDN6-203ENST00000374610 ATP10BO94823 1461 aa24.15■■□□□ 1.46
PFDN6-203ENST00000374610 CASKIN1Q8WXD9 1431 aa24.13■■□□□ 1.45
PFDN6-203ENST00000374610 PCF11O94913 1555 aaKnown RBP24.12■■□□□ 1.45
PFDN6-203ENST00000374610 PLEKHD1A6NEE1 506 aa24.11■■□□□ 1.45
PFDN6-203ENST00000374610 FAM69CQ0P6D2 419 aa24.11■■□□□ 1.45
PFDN6-203ENST00000374610 KCNH8Q96L42 1107 aa24.11■■□□□ 1.45
PFDN6-203ENST00000374610 CDK11AQ9UQ88 783 aaPredicted RBP24.1■■□□□ 1.45
PFDN6-203ENST00000374610 FYCO1Q9BQS8 1478 aa24.1■■□□□ 1.45
PFDN6-203ENST00000374610 WDR7Q9Y4E6 1490 aa24.08■■□□□ 1.45
PFDN6-203ENST00000374610 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
PFDN6-203ENST00000374610 CDK13Q14004 1512 aaKnown RBP24.07■■□□□ 1.44
PFDN6-203ENST00000374610 ABCC10Q5T3U5 1492 aa24.06■■□□□ 1.44
PFDN6-203ENST00000374610 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
PFDN6-203ENST00000374610 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
PFDN6-203ENST00000374610 DIP2BQ9P265 1576 aa24.01■■□□□ 1.43
PFDN6-203ENST00000374610 APLP2Q06481 763 aa24■■□□□ 1.43
PFDN6-203ENST00000374610 KIF13AQ9H1H9 1805 aa23.97■■□□□ 1.43
PFDN6-203ENST00000374610 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
PFDN6-203ENST00000374610 GLI2P10070 1586 aa23.92■■□□□ 1.42
PFDN6-203ENST00000374610 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
PFDN6-203ENST00000374610 TROQ12816 1431 aaPredicted RBP23.89■■□□□ 1.41
PFDN6-203ENST00000374610 TSPOAP1O95153 1857 aa23.89■■□□□ 1.41
PFDN6-203ENST00000374610 CD109Q6YHK3 1445 aa23.87■■□□□ 1.41
PFDN6-203ENST00000374610 KIF14Q15058 1648 aa23.85■■□□□ 1.41
PFDN6-203ENST00000374610 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
PFDN6-203ENST00000374610 MAP3K4Q9Y6R4 1608 aa23.83■■□□□ 1.41
PFDN6-203ENST00000374610 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
PFDN6-203ENST00000374610 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
PFDN6-203ENST00000374610 TEX14Q8IWB6 1497 aa23.8■■□□□ 1.4
PFDN6-203ENST00000374610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.45e-21■□□□□ 10
PFDN6-203ENST00000374610 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
PFDN6-203ENST00000374610 EHBP1L1Q8N3D4 1523 aa23.78■■□□□ 1.4
PFDN6-203ENST00000374610 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
PFDN6-203ENST00000374610 TTC37Q6PGP7 1564 aa23.75■■□□□ 1.39
PFDN6-203ENST00000374610 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
PFDN6-203ENST00000374610 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
PFDN6-203ENST00000374610 CCNB3Q8WWL7 1395 aa23.7■■□□□ 1.38
PFDN6-203ENST00000374610 MYO5CQ9NQX4 1742 aa23.7■■□□□ 1.38
PFDN6-203ENST00000374610 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.38
PFDN6-203ENST00000374610 SUPT6HQ7KZ85 1726 aaKnown RBP23.69■■□□□ 1.38
PFDN6-203ENST00000374610 PLCH2O75038 1416 aa23.67■■□□□ 1.38
PFDN6-203ENST00000374610 EFCAB2Q5VUJ9 269 aa23.67■■□□□ 1.38
PFDN6-203ENST00000374610 ARHGAP5Q13017 1502 aa23.66■■□□□ 1.38
PFDN6-203ENST00000374610 FANCAO15360 1455 aa23.65■■□□□ 1.38
PFDN6-203ENST00000374610 CFAP74Q9C0B2 1584 aa23.65■■□□□ 1.38
PFDN6-203ENST00000374610 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
PFDN6-203ENST00000374610 ZNF777Q9ULD5 760 aaPredicted RBP23.63■■□□□ 1.37
PFDN6-203ENST00000374610 PHLDB1Q86UU1 1377 aa23.63■■□□□ 1.37
PFDN6-203ENST00000374610 KDM6BO15054 1643 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms