RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.38
PFDN6-203ENST00000374610 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
PFDN6-203ENST00000374610 ABCC9O60706 1549 aa31.13■■■□□ 2.57
PFDN6-203ENST00000374610 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
PFDN6-203ENST00000374610 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
PFDN6-203ENST00000374610 NACADO15069 1562 aa30.04■■■□□ 2.4
PFDN6-203ENST00000374610 RB1CC1Q8TDY2 1594 aa30.04■■■□□ 2.4
PFDN6-203ENST00000374610 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
PFDN6-203ENST00000374610 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
PFDN6-203ENST00000374610 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
PFDN6-203ENST00000374610 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
PFDN6-203ENST00000374610 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
PFDN6-203ENST00000374610 BICRAQ9NZM4 1560 aa29■■■□□ 2.23
PFDN6-203ENST00000374610 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
PFDN6-203ENST00000374610 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
PFDN6-203ENST00000374610 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
PFDN6-203ENST00000374610 CC2D2AQ9P2K1 1620 aa28.12■■■□□ 2.09
PFDN6-203ENST00000374610 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
PFDN6-203ENST00000374610 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
PFDN6-203ENST00000374610 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
PFDN6-203ENST00000374610 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
PFDN6-203ENST00000374610 SMARCA2P51531 1590 aa27.78■■■□□ 2.04
PFDN6-203ENST00000374610 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
PFDN6-203ENST00000374610 NCAPD3P42695 1498 aa27.68■■■□□ 2.02
PFDN6-203ENST00000374610 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
PFDN6-203ENST00000374610 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
PFDN6-203ENST00000374610 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
PFDN6-203ENST00000374610 WIZO95785 1651 aa27.59■■■□□ 2.01
PFDN6-203ENST00000374610 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
PFDN6-203ENST00000374610 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
PFDN6-203ENST00000374610 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
PFDN6-203ENST00000374610 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
PFDN6-203ENST00000374610 NESP48681 1621 aa26.97■■□□□ 1.91
PFDN6-203ENST00000374610 LAMC3Q9Y6N6 1575 aa26.96■■□□□ 1.91
PFDN6-203ENST00000374610 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
PFDN6-203ENST00000374610 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
PFDN6-203ENST00000374610 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
PFDN6-203ENST00000374610 CFTRP13569 1480 aa26.81■■□□□ 1.88
PFDN6-203ENST00000374610 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
PFDN6-203ENST00000374610 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
PFDN6-203ENST00000374610 PRDM2Q13029 1718 aa26.64■■□□□ 1.85
PFDN6-203ENST00000374610 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
PFDN6-203ENST00000374610 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
PFDN6-203ENST00000374610 THOC2Q8NI27 1593 aaKnown RBP26.45■■□□□ 1.82
PFDN6-203ENST00000374610 CUX2O14529 1486 aa26.38■■□□□ 1.81
PFDN6-203ENST00000374610 WDR62O43379 1518 aa26.34■■□□□ 1.81
PFDN6-203ENST00000374610 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
PFDN6-203ENST00000374610 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
PFDN6-203ENST00000374610 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
PFDN6-203ENST00000374610 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
PFDN6-203ENST00000374610 CUX1P39880 1505 aa26.12■■□□□ 1.77
PFDN6-203ENST00000374610 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
PFDN6-203ENST00000374610 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
PFDN6-203ENST00000374610 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
PFDN6-203ENST00000374610 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
PFDN6-203ENST00000374610 SOGA1O94964 1423 aa25.98■■□□□ 1.75
PFDN6-203ENST00000374610 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
PFDN6-203ENST00000374610 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
PFDN6-203ENST00000374610 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
PFDN6-203ENST00000374610 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
PFDN6-203ENST00000374610 TARBP1Q13395 1621 aaKnown RBP25.87■■□□□ 1.73
PFDN6-203ENST00000374610 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
PFDN6-203ENST00000374610 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
PFDN6-203ENST00000374610 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
PFDN6-203ENST00000374610 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.72
PFDN6-203ENST00000374610 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
PFDN6-203ENST00000374610 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
PFDN6-203ENST00000374610 WDR97A6NE52 1622 aa25.72■■□□□ 1.71
PFDN6-203ENST00000374610 GAPVD1Q14C86 1478 aa25.67■■□□□ 1.7
PFDN6-203ENST00000374610 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
PFDN6-203ENST00000374610 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
PFDN6-203ENST00000374610 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
PFDN6-203ENST00000374610 FBLN2P98095 1184 aa25.58■■□□□ 1.69
PFDN6-203ENST00000374610 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
PFDN6-203ENST00000374610 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
PFDN6-203ENST00000374610 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
PFDN6-203ENST00000374610 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
PFDN6-203ENST00000374610 MAGI1Q96QZ7 1491 aaPredicted RBP25.51■■□□□ 1.67
PFDN6-203ENST00000374610 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
PFDN6-203ENST00000374610 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
PFDN6-203ENST00000374610 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
PFDN6-203ENST00000374610 CHD1O14646 1710 aa25.4■■□□□ 1.66
PFDN6-203ENST00000374610 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
PFDN6-203ENST00000374610 IGF1RP08069 1367 aa25.37■■□□□ 1.65
PFDN6-203ENST00000374610 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
PFDN6-203ENST00000374610 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
PFDN6-203ENST00000374610 CUL7Q14999 1698 aa25.32■■□□□ 1.64
PFDN6-203ENST00000374610 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
PFDN6-203ENST00000374610 CARMIL1Q5VZK9 1371 aa25.3■■□□□ 1.64
PFDN6-203ENST00000374610 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
PFDN6-203ENST00000374610 EEA1Q15075 1411 aa25.27■■□□□ 1.64
PFDN6-203ENST00000374610 DNAJC5Q9H3Z4 198 aa25.25■■□□□ 1.63
PFDN6-203ENST00000374610 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
PFDN6-203ENST00000374610 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
PFDN6-203ENST00000374610 NUP160Q12769 1436 aa25.11■■□□□ 1.61
PFDN6-203ENST00000374610 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
PFDN6-203ENST00000374610 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
PFDN6-203ENST00000374610 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
PFDN6-203ENST00000374610 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
PFDN6-203ENST00000374610 KIAA0586Q9BVV6 1533 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms