RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
RCC1-201ENST00000373831 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
RCC1-201ENST00000373831 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
RCC1-201ENST00000373831 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
RCC1-201ENST00000373831 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
RCC1-201ENST00000373831 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
RCC1-201ENST00000373831 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
RCC1-201ENST00000373831 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
RCC1-201ENST00000373831 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
RCC1-201ENST00000373831 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
RCC1-201ENST00000373831 CEP162Q5TB80 1403 aa23.4■■□□□ 1.34
RCC1-201ENST00000373831 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
RCC1-201ENST00000373831 NUP160Q12769 1436 aa23.35■■□□□ 1.33
RCC1-201ENST00000373831 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
RCC1-201ENST00000373831 CLIP1P30622 1438 aa23.31■■□□□ 1.32
RCC1-201ENST00000373831 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
RCC1-201ENST00000373831 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
RCC1-201ENST00000373831 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
RCC1-201ENST00000373831 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
RCC1-201ENST00000373831 UGGT2Q9NYU1 1516 aa23.2■■□□□ 1.3
RCC1-201ENST00000373831 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
RCC1-201ENST00000373831 EFCAB5A4FU69 1503 aa23.19■■□□□ 1.3
RCC1-201ENST00000373831 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
RCC1-201ENST00000373831 DISP1Q96F81 1524 aa23.12■■□□□ 1.29
RCC1-201ENST00000373831 KIAA0556O60303 1618 aa23.1■■□□□ 1.29
RCC1-201ENST00000373831 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
RCC1-201ENST00000373831 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
RCC1-201ENST00000373831 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
RCC1-201ENST00000373831 VPS8Q8N3P4 1428 aa23.05■■□□□ 1.28
RCC1-201ENST00000373831 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
RCC1-201ENST00000373831 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
RCC1-201ENST00000373831 PCF11O94913 1555 aaKnown RBP22.95■■□□□ 1.26
RCC1-201ENST00000373831 FMN1Q68DA7 1419 aa22.92■■□□□ 1.26
RCC1-201ENST00000373831 LRRIQ1Q96JM4 1722 aa22.89■■□□□ 1.26
RCC1-201ENST00000373831 CASKIN1Q8WXD9 1431 aa22.87■■□□□ 1.25
RCC1-201ENST00000373831 FYCO1Q9BQS8 1478 aa22.87■■□□□ 1.25
RCC1-201ENST00000373831 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
RCC1-201ENST00000373831 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
RCC1-201ENST00000373831 RAPGEF6Q8TEU7 1601 aa22.83■■□□□ 1.24
RCC1-201ENST00000373831 PLB1Q6P1J6 1458 aa22.81■■□□□ 1.24
RCC1-201ENST00000373831 PTPRGP23470 1445 aa22.8■■□□□ 1.24
RCC1-201ENST00000373831 ABCA8O94911 1581 aa22.8■■□□□ 1.24
RCC1-201ENST00000373831 NPM1P06748 294 aaKnown RBP eCLIP22.8■■□□□ 1.24
RCC1-201ENST00000373831 CFAP43Q8NDM7 1665 aa22.79■■□□□ 1.24
RCC1-201ENST00000373831 HECW1Q76N89 1606 aa22.79■■□□□ 1.24
RCC1-201ENST00000373831 TIAM1Q13009 1591 aa22.77■■□□□ 1.24
RCC1-201ENST00000373831 FAM69CQ0P6D2 419 aa22.76■■□□□ 1.23
RCC1-201ENST00000373831 NUP153P49790 1475 aaKnown RBP22.75■■□□□ 1.23
RCC1-201ENST00000373831 KIF13AQ9H1H9 1805 aa22.74■■□□□ 1.23
RCC1-201ENST00000373831 MAP3K1Q13233 1512 aa22.74■■□□□ 1.23
RCC1-201ENST00000373831 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
RCC1-201ENST00000373831 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
RCC1-201ENST00000373831 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
RCC1-201ENST00000373831 ADCY10Q96PN6 1610 aa22.72■■□□□ 1.23
RCC1-201ENST00000373831 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
RCC1-201ENST00000373831 MAPKBP1O60336 1514 aa22.7■■□□□ 1.22
RCC1-201ENST00000373831 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
RCC1-201ENST00000373831 APLP2Q06481 763 aa22.69■■□□□ 1.22
RCC1-201ENST00000373831 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
RCC1-201ENST00000373831 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
RCC1-201ENST00000373831 KANK4Q5T7N3 995 aaPredicted RBP22.67■■□□□ 1.22
RCC1-201ENST00000373831 ABCC2Q92887 1545 aa22.66■■□□□ 1.22
RCC1-201ENST00000373831 LRRC9Q6ZRR7 1453 aa22.63■■□□□ 1.21
RCC1-201ENST00000373831 DIP2BQ9P265 1576 aa22.63■■□□□ 1.21
RCC1-201ENST00000373831 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
RCC1-201ENST00000373831 UHRF1BP1LA0JNW5 1464 aa22.62■■□□□ 1.21
RCC1-201ENST00000373831 MAGI3Q5TCQ9 1506 aa22.62■■□□□ 1.21
RCC1-201ENST00000373831 ATP10BO94823 1461 aa22.6■■□□□ 1.21
RCC1-201ENST00000373831 ZCCHC11Q5TAX3 1644 aaKnown RBP22.55■■□□□ 1.2
RCC1-201ENST00000373831 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
RCC1-201ENST00000373831 KDM5BQ9UGL1 1544 aa22.54■■□□□ 1.2
RCC1-201ENST00000373831 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
RCC1-201ENST00000373831 SUPT6HQ7KZ85 1726 aaKnown RBP22.49■■□□□ 1.19
RCC1-201ENST00000373831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.48■■□□□ 1.19
RCC1-201ENST00000373831 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
RCC1-201ENST00000373831 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
RCC1-201ENST00000373831 KDM6BO15054 1643 aa22.45■■□□□ 1.18
RCC1-201ENST00000373831 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
RCC1-201ENST00000373831 KIF14Q15058 1648 aa22.43■■□□□ 1.18
RCC1-201ENST00000373831 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
RCC1-201ENST00000373831 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
RCC1-201ENST00000373831 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
RCC1-201ENST00000373831 PHLDB1Q86UU1 1377 aa22.4■■□□□ 1.18
RCC1-201ENST00000373831 PLEKHD1A6NEE1 506 aa22.39■■□□□ 1.18
RCC1-201ENST00000373831 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
RCC1-201ENST00000373831 GLI2P10070 1586 aa22.36■■□□□ 1.17
RCC1-201ENST00000373831 KDM4FA0A1W2PPD8 638 aa22.33■■□□□ 1.17
RCC1-201ENST00000373831 WDR7Q9Y4E6 1490 aa22.32■■□□□ 1.16
RCC1-201ENST00000373831 CDC42BPAQ5VT25 1732 aa22.31■■□□□ 1.16
RCC1-201ENST00000373831 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
RCC1-201ENST00000373831 MYOM3Q5VTT5 1437 aa22.29■■□□□ 1.16
RCC1-201ENST00000373831 PPRC1Q5VV67 1664 aaKnown RBP22.29■■□□□ 1.16
RCC1-201ENST00000373831 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
RCC1-201ENST00000373831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.28■■□□□ 1.16
RCC1-201ENST00000373831 ITSN2Q9NZM3 1697 aa22.27■■□□□ 1.16
RCC1-201ENST00000373831 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
RCC1-201ENST00000373831 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
RCC1-201ENST00000373831 GPATCH8Q9UKJ3 1502 aaKnown RBP22.25■■□□□ 1.15
RCC1-201ENST00000373831 COL17A1Q9UMD9 1497 aaPredicted RBP22.24■■□□□ 1.15
RCC1-201ENST00000373831 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms