RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 NISCHQ9Y2I1 1504 aa33.98■■■■□ 3.03
RCC1-201ENST00000373831 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
RCC1-201ENST00000373831 ABCC9O60706 1549 aa29.5■■■□□ 2.31
RCC1-201ENST00000373831 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
RCC1-201ENST00000373831 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
RCC1-201ENST00000373831 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
RCC1-201ENST00000373831 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
RCC1-201ENST00000373831 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
RCC1-201ENST00000373831 NACADO15069 1562 aa27.86■■■□□ 2.05
RCC1-201ENST00000373831 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
RCC1-201ENST00000373831 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
RCC1-201ENST00000373831 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
RCC1-201ENST00000373831 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
RCC1-201ENST00000373831 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
RCC1-201ENST00000373831 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
RCC1-201ENST00000373831 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
RCC1-201ENST00000373831 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
RCC1-201ENST00000373831 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
RCC1-201ENST00000373831 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
RCC1-201ENST00000373831 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
RCC1-201ENST00000373831 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
RCC1-201ENST00000373831 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
RCC1-201ENST00000373831 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
RCC1-201ENST00000373831 WIZO95785 1651 aa26.03■■□□□ 1.76
RCC1-201ENST00000373831 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
RCC1-201ENST00000373831 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
RCC1-201ENST00000373831 SMARCA2P51531 1590 aa25.83■■□□□ 1.72
RCC1-201ENST00000373831 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
RCC1-201ENST00000373831 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
RCC1-201ENST00000373831 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
RCC1-201ENST00000373831 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
RCC1-201ENST00000373831 DNAJC5Q9H3Z4 198 aa25.49■■□□□ 1.67
RCC1-201ENST00000373831 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
RCC1-201ENST00000373831 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
RCC1-201ENST00000373831 CUX2O14529 1486 aa25.39■■□□□ 1.65
RCC1-201ENST00000373831 NESP48681 1621 aa25.32■■□□□ 1.64
RCC1-201ENST00000373831 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
RCC1-201ENST00000373831 CFTRP13569 1480 aa25.02■■□□□ 1.6
RCC1-201ENST00000373831 THOC2Q8NI27 1593 aaKnown RBP25■■□□□ 1.59
RCC1-201ENST00000373831 PRDM2Q13029 1718 aa25■■□□□ 1.59
RCC1-201ENST00000373831 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
RCC1-201ENST00000373831 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
RCC1-201ENST00000373831 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
RCC1-201ENST00000373831 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
RCC1-201ENST00000373831 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
RCC1-201ENST00000373831 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
RCC1-201ENST00000373831 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
RCC1-201ENST00000373831 WDR62O43379 1518 aa24.67■■□□□ 1.54
RCC1-201ENST00000373831 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
RCC1-201ENST00000373831 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
RCC1-201ENST00000373831 SYNJ1O43426 1573 aa24.62■■□□□ 1.53
RCC1-201ENST00000373831 CUX1P39880 1505 aa24.56■■□□□ 1.52
RCC1-201ENST00000373831 BIVM-ERCC5R4GMW8 1640 aa24.56■■□□□ 1.52
RCC1-201ENST00000373831 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
RCC1-201ENST00000373831 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
RCC1-201ENST00000373831 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
RCC1-201ENST00000373831 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
RCC1-201ENST00000373831 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
RCC1-201ENST00000373831 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
RCC1-201ENST00000373831 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
RCC1-201ENST00000373831 POLA1P09884 1462 aaPredicted RBP24.28■■□□□ 1.48
RCC1-201ENST00000373831 SOGA1O94964 1423 aa24.21■■□□□ 1.47
RCC1-201ENST00000373831 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
RCC1-201ENST00000373831 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
RCC1-201ENST00000373831 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
RCC1-201ENST00000373831 IFT140Q96RY7 1462 aa24.16■■□□□ 1.46
RCC1-201ENST00000373831 ZNF608Q9ULD9 1512 aaPredicted RBP24.16■■□□□ 1.46
RCC1-201ENST00000373831 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
RCC1-201ENST00000373831 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
RCC1-201ENST00000373831 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
RCC1-201ENST00000373831 EEA1Q15075 1411 aa24.04■■□□□ 1.44
RCC1-201ENST00000373831 KIF27Q86VH2 1401 aa24.02■■□□□ 1.44
RCC1-201ENST00000373831 ABCA5Q8WWZ7 1642 aa24■■□□□ 1.43
RCC1-201ENST00000373831 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
RCC1-201ENST00000373831 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
RCC1-201ENST00000373831 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.422e-9■■■■■ 45.5
RCC1-201ENST00000373831 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
RCC1-201ENST00000373831 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
RCC1-201ENST00000373831 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
RCC1-201ENST00000373831 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
RCC1-201ENST00000373831 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
RCC1-201ENST00000373831 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
RCC1-201ENST00000373831 IGF1RP08069 1367 aa23.87■■□□□ 1.41
RCC1-201ENST00000373831 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
RCC1-201ENST00000373831 FBLN2P98095 1184 aa23.83■■□□□ 1.41
RCC1-201ENST00000373831 KIF21BO75037 1637 aa23.83■■□□□ 1.41
RCC1-201ENST00000373831 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
RCC1-201ENST00000373831 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
RCC1-201ENST00000373831 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
RCC1-201ENST00000373831 CUL7Q14999 1698 aa23.78■■□□□ 1.4
RCC1-201ENST00000373831 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
RCC1-201ENST00000373831 CHD1O14646 1710 aa23.75■■□□□ 1.39
RCC1-201ENST00000373831 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
RCC1-201ENST00000373831 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
RCC1-201ENST00000373831 RAPGEF2Q9Y4G8 1499 aa23.74■■□□□ 1.39
RCC1-201ENST00000373831 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
RCC1-201ENST00000373831 GOLGA3Q08378 1498 aa23.71■■□□□ 1.39
RCC1-201ENST00000373831 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
RCC1-201ENST00000373831 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
RCC1-201ENST00000373831 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms