RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
SRPK1-204ENST00000373825 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
SRPK1-204ENST00000373825 A0A0U1RQG5 324 aaPredicted RBP20.57■□□□□ 0.88
SRPK1-204ENST00000373825 TONSLQ96HA7 1378 aa20.56■□□□□ 0.88
SRPK1-204ENST00000373825 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
SRPK1-204ENST00000373825 ARID3AQ99856 593 aa20.54■□□□□ 0.88
SRPK1-204ENST00000373825 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
SRPK1-204ENST00000373825 PNNQ9H307 717 aaKnown RBP20.51■□□□□ 0.87
SRPK1-204ENST00000373825 RSPH6AQ9H0K4 717 aa20.5■□□□□ 0.87
SRPK1-204ENST00000373825 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
SRPK1-204ENST00000373825 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
SRPK1-204ENST00000373825 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
SRPK1-204ENST00000373825 BRPF3Q9ULD4 1205 aa20.46■□□□□ 0.87
SRPK1-204ENST00000373825 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
SRPK1-204ENST00000373825 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
SRPK1-204ENST00000373825 UBE2Q2Q8WVN8 375 aa20.44■□□□□ 0.86
SRPK1-204ENST00000373825 TNNT2P45379 298 aaPredicted RBP20.44■□□□□ 0.86
SRPK1-204ENST00000373825 CEP162Q5TB80 1403 aa20.4■□□□□ 0.86
SRPK1-204ENST00000373825 GSE1Q14687 1217 aa20.38■□□□□ 0.85
SRPK1-204ENST00000373825 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
SRPK1-204ENST00000373825 RGS3P49796 1198 aa20.35■□□□□ 0.85
SRPK1-204ENST00000373825 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
SRPK1-204ENST00000373825 GZF1Q9H116 711 aaPredicted RBP20.32■□□□□ 0.84
SRPK1-204ENST00000373825 BECN1Q14457 450 aa20.31■□□□□ 0.84
SRPK1-204ENST00000373825 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
SRPK1-204ENST00000373825 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
SRPK1-204ENST00000373825 CDK11BP21127 795 aaKnown RBP20.29■□□□□ 0.84
SRPK1-204ENST00000373825 P3H3Q8IVL6 736 aa20.27■□□□□ 0.83
SRPK1-204ENST00000373825 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
SRPK1-204ENST00000373825 SLKQ9H2G2 1235 aaPredicted RBP20.23■□□□□ 0.83
SRPK1-204ENST00000373825 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
SRPK1-204ENST00000373825 DNTTIP2Q5QJE6 756 aaKnown RBP20.22■□□□□ 0.83
SRPK1-204ENST00000373825 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
SRPK1-204ENST00000373825 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
SRPK1-204ENST00000373825 ZBTB7CA1YPR0 619 aa20.19■□□□□ 0.82
SRPK1-204ENST00000373825 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
SRPK1-204ENST00000373825 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.17■□□□□ 0.82
SRPK1-204ENST00000373825 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
SRPK1-204ENST00000373825 CLIP1P30622 1438 aa20.15■□□□□ 0.82
SRPK1-204ENST00000373825 FRAT1Q92837 279 aaPredicted RBP20.13■□□□□ 0.81
SRPK1-204ENST00000373825 TCERG1O14776 1098 aaKnown RBP20.12■□□□□ 0.81
SRPK1-204ENST00000373825 ZMYND15Q9H091 742 aa20.11■□□□□ 0.81
SRPK1-204ENST00000373825 PDE4AP27815 886 aa20.1■□□□□ 0.81
SRPK1-204ENST00000373825 PTMAP06454 111 aaKnown RBP20.09■□□□□ 0.81
SRPK1-204ENST00000373825 MSNP26038 577 aaKnown RBP20.08■□□□□ 0.8
SRPK1-204ENST00000373825 GOLGA6L3A6NEY3 463 aa20.07■□□□□ 0.8
SRPK1-204ENST00000373825 NFKBIBQ15653 356 aa20.07■□□□□ 0.8
SRPK1-204ENST00000373825 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
SRPK1-204ENST00000373825 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
SRPK1-204ENST00000373825 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
SRPK1-204ENST00000373825 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
SRPK1-204ENST00000373825 GOLGA6L22H0YM25 854 aa19.98■□□□□ 0.79
SRPK1-204ENST00000373825 PLEKHG5O94827 1062 aa19.98■□□□□ 0.79
SRPK1-204ENST00000373825 TPRNQ4KMQ1 711 aa19.97■□□□□ 0.79
SRPK1-204ENST00000373825 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
SRPK1-204ENST00000373825 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
SRPK1-204ENST00000373825 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
SRPK1-204ENST00000373825 FAM43AQ8N2R8 423 aa19.92■□□□□ 0.78
SRPK1-204ENST00000373825 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
SRPK1-204ENST00000373825 FRAT2O75474 233 aaPredicted RBP19.9■□□□□ 0.78
SRPK1-204ENST00000373825 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.78
SRPK1-204ENST00000373825 PLCB2Q00722 1185 aa19.89■□□□□ 0.77
SRPK1-204ENST00000373825 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
SRPK1-204ENST00000373825 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
SRPK1-204ENST00000373825 EXOC6Q8TAG9 804 aa19.88■□□□□ 0.77
SRPK1-204ENST00000373825 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
SRPK1-204ENST00000373825 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
SRPK1-204ENST00000373825 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
SRPK1-204ENST00000373825 RRP7BPQ9NSQ0 103 aa19.84■□□□□ 0.77
SRPK1-204ENST00000373825 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.77
SRPK1-204ENST00000373825 GOLGA3Q08378 1498 aa19.83■□□□□ 0.76
SRPK1-204ENST00000373825 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
SRPK1-204ENST00000373825 RBM10P98175 930 aaKnown RBP19.81■□□□□ 0.76
SRPK1-204ENST00000373825 HSP90AB1P08238 724 aaKnown RBP19.8■□□□□ 0.76
SRPK1-204ENST00000373825 RRP9O43818 475 aaKnown RBP19.8■□□□□ 0.76
SRPK1-204ENST00000373825 PLIN1O60240 522 aa19.79■□□□□ 0.76
SRPK1-204ENST00000373825 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
SRPK1-204ENST00000373825 EEA1Q15075 1411 aa19.76■□□□□ 0.75
SRPK1-204ENST00000373825 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
SRPK1-204ENST00000373825 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
SRPK1-204ENST00000373825 SOGA1O94964 1423 aa19.74■□□□□ 0.75
SRPK1-204ENST00000373825 ABCC9O60706 1549 aa19.72■□□□□ 0.75
SRPK1-204ENST00000373825 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
SRPK1-204ENST00000373825 TNNT3P45378 269 aaPredicted RBP19.69■□□□□ 0.74
SRPK1-204ENST00000373825 PDE4CQ08493 712 aa19.69■□□□□ 0.74
SRPK1-204ENST00000373825 FAM161AQ3B820 660 aa19.68■□□□□ 0.74
SRPK1-204ENST00000373825 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
SRPK1-204ENST00000373825 FOXD4L1Q9NU39 408 aa19.67■□□□□ 0.74
SRPK1-204ENST00000373825 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
SRPK1-204ENST00000373825 MS4A1P11836 297 aa19.66■□□□□ 0.74
SRPK1-204ENST00000373825 PRKRIP1Q9H875 184 aaPredicted RBP19.66■□□□□ 0.74
SRPK1-204ENST00000373825 R3HCC1Q9Y3T6 440 aaKnown RBP19.66■□□□□ 0.74
SRPK1-204ENST00000373825 CHAF1AQ13111 956 aaPredicted RBP19.65■□□□□ 0.74
SRPK1-204ENST00000373825 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
SRPK1-204ENST00000373825 ZNF777Q9ULD5 760 aaPredicted RBP19.64■□□□□ 0.73
SRPK1-204ENST00000373825 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
SRPK1-204ENST00000373825 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
SRPK1-204ENST00000373825 GBP4Q96PP9 640 aa19.64■□□□□ 0.73
SRPK1-204ENST00000373825 POGKQ9P215 609 aa19.62■□□□□ 0.73
SRPK1-204ENST00000373825 BACH2Q9BYV9 841 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms