RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 PELP1Q8IZL8 1130 aaKnown RBP25.64■■□□□ 1.7
SRPK1-204ENST00000373825 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
SRPK1-204ENST00000373825 MYT1Q01538 1121 aa25.08■■□□□ 1.61
SRPK1-204ENST00000373825 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
SRPK1-204ENST00000373825 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
SRPK1-204ENST00000373825 HRCP23327 699 aa24.77■■□□□ 1.56
SRPK1-204ENST00000373825 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
SRPK1-204ENST00000373825 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
SRPK1-204ENST00000373825 CENPBP07199 599 aaPredicted RBP24.33■■□□□ 1.49
SRPK1-204ENST00000373825 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
SRPK1-204ENST00000373825 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
SRPK1-204ENST00000373825 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
SRPK1-204ENST00000373825 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
SRPK1-204ENST00000373825 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.38
SRPK1-204ENST00000373825 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
SRPK1-204ENST00000373825 ERICH6Q7L0X2 663 aa23.66■■□□□ 1.38
SRPK1-204ENST00000373825 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.37
SRPK1-204ENST00000373825 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
SRPK1-204ENST00000373825 FAM9AQ8IZU1 332 aaPredicted RBP23.58■■□□□ 1.37
SRPK1-204ENST00000373825 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
SRPK1-204ENST00000373825 ACIN1Q9UKV3 1341 aaKnown RBP23.36■■□□□ 1.33
SRPK1-204ENST00000373825 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
SRPK1-204ENST00000373825 DIEXFQ68CQ4 756 aaKnown RBP23.22■■□□□ 1.31
SRPK1-204ENST00000373825 NEUROD1Q13562 356 aa23.14■■□□□ 1.3
SRPK1-204ENST00000373825 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
SRPK1-204ENST00000373825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
SRPK1-204ENST00000373825 NEFLP07196 543 aa23.01■■□□□ 1.27
SRPK1-204ENST00000373825 BCANQ96GW7 911 aa22.84■■□□□ 1.25
SRPK1-204ENST00000373825 BCL11AQ9H165 835 aa22.81■■□□□ 1.24
SRPK1-204ENST00000373825 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
SRPK1-204ENST00000373825 APLP2Q06481 763 aa22.66■■□□□ 1.22
SRPK1-204ENST00000373825 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
SRPK1-204ENST00000373825 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
SRPK1-204ENST00000373825 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
SRPK1-204ENST00000373825 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
SRPK1-204ENST00000373825 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
SRPK1-204ENST00000373825 EIF5BO60841 1220 aaKnown RBP22.35■■□□□ 1.17
SRPK1-204ENST00000373825 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
SRPK1-204ENST00000373825 CSRNP3Q8WYN3 585 aa22.14■■□□□ 1.13
SRPK1-204ENST00000373825 FKBP8Q14318 412 aa22.12■■□□□ 1.13
SRPK1-204ENST00000373825 MIER1Q8N108 512 aa22.11■■□□□ 1.13
SRPK1-204ENST00000373825 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
SRPK1-204ENST00000373825 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
SRPK1-204ENST00000373825 NBR1Q14596 966 aa22.04■■□□□ 1.12
SRPK1-204ENST00000373825 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
SRPK1-204ENST00000373825 DAXXQ9UER7 740 aaPredicted RBP22■■□□□ 1.11
SRPK1-204ENST00000373825 ITGAEP38570 1179 aa21.97■■□□□ 1.11
SRPK1-204ENST00000373825 CNGB1Q14028 1251 aaPredicted RBP21.88■■□□□ 1.09
SRPK1-204ENST00000373825 RTN4Q9NQC3 1192 aaKnown RBP21.88■■□□□ 1.09
SRPK1-204ENST00000373825 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
SRPK1-204ENST00000373825 PRKCSHP14314 528 aaPredicted RBP21.85■■□□□ 1.09
SRPK1-204ENST00000373825 SUPT16HQ9Y5B9 1047 aaKnown RBP21.82■■□□□ 1.08
SRPK1-204ENST00000373825 MYT1LQ9UL68 1186 aa21.76■■□□□ 1.07
SRPK1-204ENST00000373825 TSHZ2Q9NRE2 1034 aa21.71■■□□□ 1.07
SRPK1-204ENST00000373825 NPM2Q86SE8 214 aaKnown RBP21.67■■□□□ 1.06
SRPK1-204ENST00000373825 ANP32AP39687 249 aaKnown RBP21.65■■□□□ 1.06
SRPK1-204ENST00000373825 TRIM52Q96A61 297 aa21.64■■□□□ 1.05
SRPK1-204ENST00000373825 IRX6P78412 446 aaPredicted RBP21.62■■□□□ 1.05
SRPK1-204ENST00000373825 DEKP35659 375 aaKnown RBP21.62■■□□□ 1.05
SRPK1-204ENST00000373825 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.62■■□□□ 1.05
SRPK1-204ENST00000373825 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
SRPK1-204ENST00000373825 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
SRPK1-204ENST00000373825 GLIPR1L2Q4G1C9 344 aa21.59■■□□□ 1.05
SRPK1-204ENST00000373825 RBM19Q9Y4C8 960 aaKnown RBP21.57■■□□□ 1.04
SRPK1-204ENST00000373825 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
SRPK1-204ENST00000373825 ANP32CO43423 234 aa21.56■■□□□ 1.04
SRPK1-204ENST00000373825 ZBTB47Q9UFB7 747 aaPredicted RBP21.46■■□□□ 1.03
SRPK1-204ENST00000373825 CCDC180Q9P1Z9 1646 aa21.46■■□□□ 1.03
SRPK1-204ENST00000373825 DDX10Q13206 875 aaKnown RBP21.43■■□□□ 1.02
SRPK1-204ENST00000373825 HNRNPUQ00839 825 aaKnown RBP eCLIP21.37■■□□□ 1.01
SRPK1-204ENST00000373825 ANO8Q9HCE9 1232 aaPredicted RBP21.37■■□□□ 1.01
SRPK1-204ENST00000373825 ARXQ96QS3 562 aa21.3■■□□□ 1
SRPK1-204ENST00000373825 NOP58Q9Y2X3 529 aaKnown RBP21.2■□□□□ 0.98
SRPK1-204ENST00000373825 NEFMP07197 916 aa21.19■□□□□ 0.98
SRPK1-204ENST00000373825 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
SRPK1-204ENST00000373825 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
SRPK1-204ENST00000373825 FAM9BQ8IZU0 186 aa21.09■□□□□ 0.97
SRPK1-204ENST00000373825 SALL2Q9Y467 1007 aaPredicted RBP21.07■□□□□ 0.96
SRPK1-204ENST00000373825 FAM50AQ14320 339 aaKnown RBP21.01■□□□□ 0.95
SRPK1-204ENST00000373825 B4GALNT3Q6L9W6 998 aa21.01■□□□□ 0.95
SRPK1-204ENST00000373825 NAP1L5Q96NT1 182 aaPredicted RBP20.95■□□□□ 0.95
SRPK1-204ENST00000373825 ERICH6BQ5W0A0 696 aa20.94■□□□□ 0.94
SRPK1-204ENST00000373825 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
SRPK1-204ENST00000373825 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
SRPK1-204ENST00000373825 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
SRPK1-204ENST00000373825 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
SRPK1-204ENST00000373825 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
SRPK1-204ENST00000373825 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
SRPK1-204ENST00000373825 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
SRPK1-204ENST00000373825 IL27Q8NEV9 243 aa20.81■□□□□ 0.92
SRPK1-204ENST00000373825 PPM1GO15355 546 aaPredicted RBP20.8■□□□□ 0.92
SRPK1-204ENST00000373825 PKNOX2Q96KN3 472 aa20.76■□□□□ 0.91
SRPK1-204ENST00000373825 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
SRPK1-204ENST00000373825 ZNF326Q5BKZ1 582 aaKnown RBP20.71■□□□□ 0.91
SRPK1-204ENST00000373825 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
SRPK1-204ENST00000373825 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
SRPK1-204ENST00000373825 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
SRPK1-204ENST00000373825 MSH5O43196 834 aa20.6■□□□□ 0.89
SRPK1-204ENST00000373825 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
SRPK1-204ENST00000373825 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms