RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 CTTNBP2Q8WZ74 1663 aa30.38■■■□□ 2.45
SRSF4-201ENST00000373795 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
SRSF4-201ENST00000373795 WDR62O43379 1518 aa30.34■■■□□ 2.45
SRSF4-201ENST00000373795 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
SRSF4-201ENST00000373795 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
SRSF4-201ENST00000373795 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
SRSF4-201ENST00000373795 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
SRSF4-201ENST00000373795 IFT140Q96RY7 1462 aa30.25■■■□□ 2.43
SRSF4-201ENST00000373795 FHAD1B1AJZ9 1412 aa30.25■■■□□ 2.43
SRSF4-201ENST00000373795 EFCAB5A4FU69 1503 aa30.24■■■□□ 2.43
SRSF4-201ENST00000373795 TIAM1Q13009 1591 aa30.21■■■□□ 2.43
SRSF4-201ENST00000373795 PCF11O94913 1555 aaKnown RBP30.2■■■□□ 2.42
SRSF4-201ENST00000373795 GRIN2BQ13224 1484 aa30.2■■■□□ 2.42
SRSF4-201ENST00000373795 MAP3K1Q13233 1512 aa30.15■■■□□ 2.42
SRSF4-201ENST00000373795 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
SRSF4-201ENST00000373795 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
SRSF4-201ENST00000373795 LRRC9Q6ZRR7 1453 aa30.11■■■□□ 2.41
SRSF4-201ENST00000373795 RRBP1Q9P2E9 1410 aaKnown RBP30.11■■■□□ 2.41
SRSF4-201ENST00000373795 SAMD9Q5K651 1589 aa30.1■■■□□ 2.41
SRSF4-201ENST00000373795 CASKIN1Q8WXD9 1431 aa30.08■■■□□ 2.41
SRSF4-201ENST00000373795 FYCO1Q9BQS8 1478 aa30.06■■■□□ 2.4
SRSF4-201ENST00000373795 FMN1Q68DA7 1419 aa30.06■■■□□ 2.4
SRSF4-201ENST00000373795 EIF4G3O43432 1585 aaKnown RBP30.05■■■□□ 2.4
SRSF4-201ENST00000373795 CCNB3Q8WWL7 1395 aa30.04■■■□□ 2.4
SRSF4-201ENST00000373795 CFAP43Q8NDM7 1665 aa30.03■■■□□ 2.4
SRSF4-201ENST00000373795 SNAPC4Q5SXM2 1469 aa30.01■■■□□ 2.4
SRSF4-201ENST00000373795 ITGAEP38570 1179 aa29.98■■■□□ 2.39
SRSF4-201ENST00000373795 PHLDB1Q86UU1 1377 aa29.98■■■□□ 2.39
SRSF4-201ENST00000373795 IQGAP2Q13576 1575 aa29.97■■■□□ 2.39
SRSF4-201ENST00000373795 SCAF1Q9H7N4 1312 aaKnown RBP29.93■■■□□ 2.38
SRSF4-201ENST00000373795 DIEXFQ68CQ4 756 aaKnown RBP29.89■■■□□ 2.38
SRSF4-201ENST00000373795 LRRIQ1Q96JM4 1722 aa29.89■■■□□ 2.37
SRSF4-201ENST00000373795 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
SRSF4-201ENST00000373795 FBLN2P98095 1184 aa29.85■■■□□ 2.37
SRSF4-201ENST00000373795 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
SRSF4-201ENST00000373795 FAM50AQ14320 339 aaKnown RBP29.83■■■□□ 2.37
SRSF4-201ENST00000373795 KIAA0586Q9BVV6 1533 aa29.82■■■□□ 2.36
SRSF4-201ENST00000373795 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
SRSF4-201ENST00000373795 MTUS2Q5JR59 1369 aa29.8■■■□□ 2.36
SRSF4-201ENST00000373795 UGGT2Q9NYU1 1516 aa29.79■■■□□ 2.36
SRSF4-201ENST00000373795 SYNJ2O15056 1496 aa29.76■■■□□ 2.35
SRSF4-201ENST00000373795 DHX57Q6P158 1386 aaKnown RBP29.73■■■□□ 2.35
SRSF4-201ENST00000373795 ARID3CA6NKF2 412 aa29.72■■■□□ 2.35
SRSF4-201ENST00000373795 DISP1Q96F81 1524 aa29.72■■■□□ 2.35
SRSF4-201ENST00000373795 CEP170Q5SW79 1584 aa29.7■■■□□ 2.34
SRSF4-201ENST00000373795 ZNF316A6NFI3 1004 aaPredicted RBP29.67■■■□□ 2.34
SRSF4-201ENST00000373795 KIAA0556O60303 1618 aa29.66■■■□□ 2.34
SRSF4-201ENST00000373795 MAGI3Q5TCQ9 1506 aa29.65■■■□□ 2.34
SRSF4-201ENST00000373795 HECW1Q76N89 1606 aa29.64■■■□□ 2.34
SRSF4-201ENST00000373795 ACIN1Q9UKV3 1341 aaKnown RBP29.64■■■□□ 2.33
SRSF4-201ENST00000373795 NCOA2Q15596 1464 aa29.63■■■□□ 2.33
SRSF4-201ENST00000373795 RAB3GAP2Q9H2M9 1393 aa29.63■■■□□ 2.33
SRSF4-201ENST00000373795 EPRSP07814 1512 aaKnown RBP29.63■■■□□ 2.33
SRSF4-201ENST00000373795 NEUROD1Q13562 356 aa29.62■■■□□ 2.33
SRSF4-201ENST00000373795 FGD6Q6ZV73 1430 aa29.62■■■□□ 2.33
SRSF4-201ENST00000373795 CCDC18Q5T9S5 1454 aa29.62■■■□□ 2.33
SRSF4-201ENST00000373795 CDK13Q14004 1512 aaKnown RBP29.61■■■□□ 2.33
SRSF4-201ENST00000373795 EHBP1L1Q8N3D4 1523 aa29.58■■■□□ 2.33
SRSF4-201ENST00000373795 SUPT6HQ7KZ85 1726 aaKnown RBP29.58■■■□□ 2.33
SRSF4-201ENST00000373795 NUP160Q12769 1436 aa29.57■■■□□ 2.32
SRSF4-201ENST00000373795 JPH4Q96JJ6 628 aa29.57■■■□□ 2.32
SRSF4-201ENST00000373795 SETD5Q9C0A6 1442 aa29.56■■■□□ 2.32
SRSF4-201ENST00000373795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.55■■■□□ 2.322e-23■□□□□ 10.7
SRSF4-201ENST00000373795 CLSPNQ9HAW4 1339 aa29.54■■■□□ 2.32
SRSF4-201ENST00000373795 MYOM3Q5VTT5 1437 aa29.53■■■□□ 2.32
SRSF4-201ENST00000373795 ARHGEF11O15085 1522 aa29.48■■■□□ 2.31
SRSF4-201ENST00000373795 NUP153P49790 1475 aaKnown RBP29.47■■■□□ 2.31
SRSF4-201ENST00000373795 RAPGEF6Q8TEU7 1601 aa29.45■■■□□ 2.31
SRSF4-201ENST00000373795 CENPBP07199 599 aaPredicted RBP29.45■■■□□ 2.3
SRSF4-201ENST00000373795 PTPRKQ15262 1439 aa29.44■■■□□ 2.3
SRSF4-201ENST00000373795 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
SRSF4-201ENST00000373795 PLB1Q6P1J6 1458 aa29.42■■■□□ 2.3
SRSF4-201ENST00000373795 PTPN23Q9H3S7 1636 aa29.39■■■□□ 2.3
SRSF4-201ENST00000373795 MAPKBP1O60336 1514 aa29.34■■■□□ 2.29
SRSF4-201ENST00000373795 CHD1O14646 1710 aa29.32■■■□□ 2.28
SRSF4-201ENST00000373795 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
SRSF4-201ENST00000373795 GTF3C3Q9Y5Q9 886 aa29.31■■■□□ 2.28
SRSF4-201ENST00000373795 CHIC2Q9UKJ5 165 aa29.28■■■□□ 2.28
SRSF4-201ENST00000373795 MIER1Q8N108 512 aa29.27■■■□□ 2.28
SRSF4-201ENST00000373795 PRG4Q92954 1404 aaPredicted RBP29.27■■■□□ 2.28
SRSF4-201ENST00000373795 TCOF1Q13428 1488 aaKnown RBP29.27■■■□□ 2.28
SRSF4-201ENST00000373795 HFM1A2PYH4 1435 aa29.25■■■□□ 2.27
SRSF4-201ENST00000373795 MIA2Q96PC5 1412 aa29.24■■■□□ 2.27
SRSF4-201ENST00000373795 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
SRSF4-201ENST00000373795 RRP7BPQ9NSQ0 103 aa29.22■■■□□ 2.27
SRSF4-201ENST00000373795 NAIPQ13075 1403 aa29.22■■■□□ 2.27
SRSF4-201ENST00000373795 YTHDC1Q96MU7 727 aaKnown RBP29.21■■■□□ 2.27
SRSF4-201ENST00000373795 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.26
SRSF4-201ENST00000373795 TROQ12816 1431 aaPredicted RBP29.19■■■□□ 2.26
SRSF4-201ENST00000373795 PELP1Q8IZL8 1130 aaKnown RBP29.18■■■□□ 2.26
SRSF4-201ENST00000373795 ABCA8O94911 1581 aa29.18■■■□□ 2.26
SRSF4-201ENST00000373795 PTPRGP23470 1445 aa29.15■■■□□ 2.26
SRSF4-201ENST00000373795 ATP10BO94823 1461 aa29.12■■■□□ 2.25
SRSF4-201ENST00000373795 KIF14Q15058 1648 aa29.11■■■□□ 2.25
SRSF4-201ENST00000373795 PLEKHD1A6NEE1 506 aa29.1■■■□□ 2.25
SRSF4-201ENST00000373795 UACAQ9BZF9 1416 aa29.07■■■□□ 2.24
SRSF4-201ENST00000373795 CFDP1Q9UEE9 299 aaPredicted RBP29.07■■■□□ 2.24
SRSF4-201ENST00000373795 GPATCH8Q9UKJ3 1502 aaKnown RBP29.04■■■□□ 2.24
SRSF4-201ENST00000373795 SHROOM2Q13796 1616 aa29.04■■■□□ 2.24
SRSF4-201ENST00000373795 ZNF777Q9ULD5 760 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms