RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 KIAA0586Q9BVV6 1533 aa27.24■■□□□ 1.95
HDAC8-208ENST00000373583 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
HDAC8-208ENST00000373583 JPH4Q96JJ6 628 aa27.15■■□□□ 1.94
HDAC8-208ENST00000373583 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
HDAC8-208ENST00000373583 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
HDAC8-208ENST00000373583 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
HDAC8-208ENST00000373583 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
HDAC8-208ENST00000373583 EEA1Q15075 1411 aa26.97■■□□□ 1.91
HDAC8-208ENST00000373583 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.9
HDAC8-208ENST00000373583 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
HDAC8-208ENST00000373583 ADCY10Q96PN6 1610 aa26.9■■□□□ 1.9
HDAC8-208ENST00000373583 DISP1Q96F81 1524 aa26.89■■□□□ 1.89
HDAC8-208ENST00000373583 KIAA0556O60303 1618 aa26.87■■□□□ 1.89
HDAC8-208ENST00000373583 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
HDAC8-208ENST00000373583 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
HDAC8-208ENST00000373583 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.89
HDAC8-208ENST00000373583 PTPRGP23470 1445 aa26.81■■□□□ 1.88
HDAC8-208ENST00000373583 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
HDAC8-208ENST00000373583 MAPKBP1O60336 1514 aa26.78■■□□□ 1.88
HDAC8-208ENST00000373583 KIF21BO75037 1637 aa26.76■■□□□ 1.87
HDAC8-208ENST00000373583 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.87
HDAC8-208ENST00000373583 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
HDAC8-208ENST00000373583 UHRF1BP1LA0JNW5 1464 aa26.72■■□□□ 1.87
HDAC8-208ENST00000373583 ABCC2Q92887 1545 aa26.69■■□□□ 1.86
HDAC8-208ENST00000373583 UACAQ9BZF9 1416 aa26.66■■□□□ 1.86
HDAC8-208ENST00000373583 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
HDAC8-208ENST00000373583 SAMD9Q5K651 1589 aa26.64■■□□□ 1.86
HDAC8-208ENST00000373583 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
HDAC8-208ENST00000373583 ABCC10Q5T3U5 1492 aa26.62■■□□□ 1.85
HDAC8-208ENST00000373583 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
HDAC8-208ENST00000373583 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
HDAC8-208ENST00000373583 KDM5BQ9UGL1 1544 aa26.58■■□□□ 1.85
HDAC8-208ENST00000373583 ABCA8O94911 1581 aa26.57■■□□□ 1.84
HDAC8-208ENST00000373583 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
HDAC8-208ENST00000373583 PLB1Q6P1J6 1458 aa26.52■■□□□ 1.84
HDAC8-208ENST00000373583 ASXL2Q76L83 1435 aa26.48■■□□□ 1.83
HDAC8-208ENST00000373583 EFCAB5A4FU69 1503 aa26.48■■□□□ 1.83
HDAC8-208ENST00000373583 GLI2P10070 1586 aa26.45■■□□□ 1.82
HDAC8-208ENST00000373583 FAM69CQ0P6D2 419 aa26.44■■□□□ 1.82
HDAC8-208ENST00000373583 RAPGEF6Q8TEU7 1601 aa26.4■■□□□ 1.82
HDAC8-208ENST00000373583 TSPOAP1O95153 1857 aa26.39■■□□□ 1.82
HDAC8-208ENST00000373583 EPRSP07814 1512 aaKnown RBP26.36■■□□□ 1.81
HDAC8-208ENST00000373583 WDR7Q9Y4E6 1490 aa26.36■■□□□ 1.81
HDAC8-208ENST00000373583 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
HDAC8-208ENST00000373583 MAP3K4Q9Y6R4 1608 aa26.35■■□□□ 1.81
HDAC8-208ENST00000373583 FHOD3Q2V2M9 1422 aa26.34■■□□□ 1.81
HDAC8-208ENST00000373583 PPRC1Q5VV67 1664 aaKnown RBP26.34■■□□□ 1.81
HDAC8-208ENST00000373583 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
HDAC8-208ENST00000373583 ATP10BO94823 1461 aa26.26■■□□□ 1.79
HDAC8-208ENST00000373583 CFAP43Q8NDM7 1665 aa26.25■■□□□ 1.79
HDAC8-208ENST00000373583 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
HDAC8-208ENST00000373583 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
HDAC8-208ENST00000373583 KDM6BO15054 1643 aa26.24■■□□□ 1.79
HDAC8-208ENST00000373583 ARHGAP35Q9NRY4 1499 aa26.23■■□□□ 1.79
HDAC8-208ENST00000373583 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
HDAC8-208ENST00000373583 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
HDAC8-208ENST00000373583 FMN1Q68DA7 1419 aa26.15■■□□□ 1.78
HDAC8-208ENST00000373583 ABCA9Q8IUA7 1624 aa26.14■■□□□ 1.77
HDAC8-208ENST00000373583 HECW1Q76N89 1606 aa26.13■■□□□ 1.77
HDAC8-208ENST00000373583 MAGI3Q5TCQ9 1506 aa26.12■■□□□ 1.77
HDAC8-208ENST00000373583 ARID3CA6NKF2 412 aa26.09■■□□□ 1.77
HDAC8-208ENST00000373583 CD109Q6YHK3 1445 aa26.07■■□□□ 1.76
HDAC8-208ENST00000373583 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
HDAC8-208ENST00000373583 CDK13Q14004 1512 aaKnown RBP26.04■■□□□ 1.76
HDAC8-208ENST00000373583 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
HDAC8-208ENST00000373583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.99■■□□□ 1.75
HDAC8-208ENST00000373583 HNRNPUL2Q1KMD3 747 aaKnown RBP25.99■■□□□ 1.75
HDAC8-208ENST00000373583 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
HDAC8-208ENST00000373583 COL17A1Q9UMD9 1497 aaPredicted RBP25.98■■□□□ 1.75
HDAC8-208ENST00000373583 CLIP1P30622 1438 aa25.97■■□□□ 1.75
HDAC8-208ENST00000373583 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
HDAC8-208ENST00000373583 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
HDAC8-208ENST00000373583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.93■■□□□ 1.74
HDAC8-208ENST00000373583 TTC37Q6PGP7 1564 aa25.91■■□□□ 1.74
HDAC8-208ENST00000373583 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
HDAC8-208ENST00000373583 ARAP3Q8WWN8 1544 aa25.9■■□□□ 1.74
HDAC8-208ENST00000373583 CCDC18Q5T9S5 1454 aa25.89■■□□□ 1.73
HDAC8-208ENST00000373583 NEO1Q92859 1461 aa25.89■■□□□ 1.73
HDAC8-208ENST00000373583 CFAP74Q9C0B2 1584 aa25.88■■□□□ 1.73
HDAC8-208ENST00000373583 PHLDB1Q86UU1 1377 aa25.88■■□□□ 1.73
HDAC8-208ENST00000373583 KIF14Q15058 1648 aa25.85■■□□□ 1.73
HDAC8-208ENST00000373583 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
HDAC8-208ENST00000373583 MYO5CQ9NQX4 1742 aa25.83■■□□□ 1.72
HDAC8-208ENST00000373583 ATP1B4Q9UN42 357 aaPredicted RBP25.82■■□□□ 1.72
HDAC8-208ENST00000373583 TROQ12816 1431 aaPredicted RBP25.81■■□□□ 1.72
HDAC8-208ENST00000373583 CDK11AQ9UQ88 783 aaPredicted RBP25.81■■□□□ 1.72
HDAC8-208ENST00000373583 FANCAO15360 1455 aa25.77■■□□□ 1.72
HDAC8-208ENST00000373583 FRMPD1Q5SYB0 1578 aa25.76■■□□□ 1.71
HDAC8-208ENST00000373583 RICTORQ6R327 1708 aa25.74■■□□□ 1.71
HDAC8-208ENST00000373583 PLCH2O75038 1416 aa25.72■■□□□ 1.71
HDAC8-208ENST00000373583 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
HDAC8-208ENST00000373583 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
HDAC8-208ENST00000373583 CDC42BPBQ9Y5S2 1711 aa25.67■■□□□ 1.7
HDAC8-208ENST00000373583 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
HDAC8-208ENST00000373583 ZMYM4Q5VZL5 1548 aa25.64■■□□□ 1.7
HDAC8-208ENST00000373583 CDC42BPAQ5VT25 1732 aa25.64■■□□□ 1.7
HDAC8-208ENST00000373583 ADGRL1O94910 1474 aa25.62■■□□□ 1.69
HDAC8-208ENST00000373583 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
HDAC8-208ENST00000373583 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
HDAC8-208ENST00000373583 ARHGAP5Q13017 1502 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms