RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
HDAC8-208ENST00000373583 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
HDAC8-208ENST00000373583 ABCC9O60706 1549 aa34.39■■■■□ 3.1
HDAC8-208ENST00000373583 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
HDAC8-208ENST00000373583 NACADO15069 1562 aa33.04■■■□□ 2.88
HDAC8-208ENST00000373583 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
HDAC8-208ENST00000373583 ZCCHC6Q5VYS8 1495 aaKnown RBP32.77■■■□□ 2.84
HDAC8-208ENST00000373583 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
HDAC8-208ENST00000373583 DCAF1Q9Y4B6 1507 aa32.62■■■□□ 2.81
HDAC8-208ENST00000373583 UNC13AQ9UPW8 1703 aa32.47■■■□□ 2.79
HDAC8-208ENST00000373583 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
HDAC8-208ENST00000373583 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
HDAC8-208ENST00000373583 SCRIBQ14160 1630 aa31.96■■■□□ 2.71
HDAC8-208ENST00000373583 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
HDAC8-208ENST00000373583 DNAJC5BQ9UF47 199 aa31.63■■■□□ 2.65
HDAC8-208ENST00000373583 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
HDAC8-208ENST00000373583 CC2D2AQ9P2K1 1620 aa31.19■■■□□ 2.58
HDAC8-208ENST00000373583 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
HDAC8-208ENST00000373583 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
HDAC8-208ENST00000373583 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
HDAC8-208ENST00000373583 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
HDAC8-208ENST00000373583 SMARCA2P51531 1590 aa30.43■■■□□ 2.46
HDAC8-208ENST00000373583 ATAD2BQ9ULI0 1458 aa30.41■■■□□ 2.46
HDAC8-208ENST00000373583 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
HDAC8-208ENST00000373583 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
HDAC8-208ENST00000373583 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
HDAC8-208ENST00000373583 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
HDAC8-208ENST00000373583 WIZO95785 1651 aa29.98■■■□□ 2.39
HDAC8-208ENST00000373583 RSF1Q96T23 1441 aaPredicted RBP29.84■■■□□ 2.37
HDAC8-208ENST00000373583 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
HDAC8-208ENST00000373583 NESP48681 1621 aa29.71■■■□□ 2.35
HDAC8-208ENST00000373583 TOP2AP11388 1531 aaKnown RBP29.68■■■□□ 2.34
HDAC8-208ENST00000373583 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
HDAC8-208ENST00000373583 CUX2O14529 1486 aa29.5■■■□□ 2.31
HDAC8-208ENST00000373583 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
HDAC8-208ENST00000373583 CADPSQ9ULU8 1353 aa29.49■■■□□ 2.31
HDAC8-208ENST00000373583 THOC2Q8NI27 1593 aaKnown RBP29.44■■■□□ 2.3
HDAC8-208ENST00000373583 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
HDAC8-208ENST00000373583 CFTRP13569 1480 aa29.33■■■□□ 2.29
HDAC8-208ENST00000373583 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
HDAC8-208ENST00000373583 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
HDAC8-208ENST00000373583 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
HDAC8-208ENST00000373583 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
HDAC8-208ENST00000373583 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
HDAC8-208ENST00000373583 WDR62O43379 1518 aa29.15■■■□□ 2.26
HDAC8-208ENST00000373583 URB2Q14146 1524 aaKnown RBP28.92■■■□□ 2.22
HDAC8-208ENST00000373583 SUPT5HO00267 1087 aaKnown RBP28.77■■■□□ 2.2
HDAC8-208ENST00000373583 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
HDAC8-208ENST00000373583 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
HDAC8-208ENST00000373583 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
HDAC8-208ENST00000373583 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
HDAC8-208ENST00000373583 IFT140Q96RY7 1462 aa28.58■■■□□ 2.17
HDAC8-208ENST00000373583 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
HDAC8-208ENST00000373583 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
HDAC8-208ENST00000373583 CUX1P39880 1505 aa28.43■■■□□ 2.14
HDAC8-208ENST00000373583 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
HDAC8-208ENST00000373583 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
HDAC8-208ENST00000373583 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
HDAC8-208ENST00000373583 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
HDAC8-208ENST00000373583 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
HDAC8-208ENST00000373583 SOGA1O94964 1423 aa28.27■■■□□ 2.12
HDAC8-208ENST00000373583 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
HDAC8-208ENST00000373583 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.11
HDAC8-208ENST00000373583 TOP2BQ02880 1626 aa28.2■■■□□ 2.1
HDAC8-208ENST00000373583 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
HDAC8-208ENST00000373583 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
HDAC8-208ENST00000373583 CHD1O14646 1710 aa28.12■■■□□ 2.09
HDAC8-208ENST00000373583 ABCA10Q8WWZ4 1543 aa28.1■■■□□ 2.09
HDAC8-208ENST00000373583 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
HDAC8-208ENST00000373583 OSCARQ8IYS5 282 aa28.09■■■□□ 2.09
HDAC8-208ENST00000373583 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
HDAC8-208ENST00000373583 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
HDAC8-208ENST00000373583 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
HDAC8-208ENST00000373583 MAGI1Q96QZ7 1491 aaPredicted RBP28.01■■■□□ 2.07
HDAC8-208ENST00000373583 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
HDAC8-208ENST00000373583 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
HDAC8-208ENST00000373583 SYNJ2O15056 1496 aa27.88■■■□□ 2.05
HDAC8-208ENST00000373583 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
HDAC8-208ENST00000373583 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
HDAC8-208ENST00000373583 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
HDAC8-208ENST00000373583 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
HDAC8-208ENST00000373583 ERICH3Q5RHP9 1530 aa27.79■■■□□ 2.04
HDAC8-208ENST00000373583 FBLN2P98095 1184 aa27.79■■■□□ 2.04
HDAC8-208ENST00000373583 CLASP1Q7Z460 1538 aa27.78■■■□□ 2.04
HDAC8-208ENST00000373583 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
HDAC8-208ENST00000373583 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
HDAC8-208ENST00000373583 GRIN2AQ12879 1464 aa27.68■■■□□ 2.02
HDAC8-208ENST00000373583 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
HDAC8-208ENST00000373583 CEP170Q5SW79 1584 aa27.57■■■□□ 2
HDAC8-208ENST00000373583 NUP160Q12769 1436 aa27.57■■■□□ 2
HDAC8-208ENST00000373583 KIF27Q86VH2 1401 aa27.57■■■□□ 2
HDAC8-208ENST00000373583 TRIM41Q8WV44 630 aa27.56■■■□□ 2
HDAC8-208ENST00000373583 CUL7Q14999 1698 aa27.55■■■□□ 2
HDAC8-208ENST00000373583 ARAP1Q96P48 1450 aa27.52■■■□□ 2
HDAC8-208ENST00000373583 SHROOM2Q13796 1616 aa27.46■■□□□ 1.99
HDAC8-208ENST00000373583 IGF1RP08069 1367 aa27.44■■□□□ 1.98
HDAC8-208ENST00000373583 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
HDAC8-208ENST00000373583 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
HDAC8-208ENST00000373583 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
HDAC8-208ENST00000373583 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms